Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000699-TA|BGIBMGA000699-PA|IPR000159|RA,
IPR001849|Pleckstrin-like
         (1023 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   4.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   4.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   4.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   4.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   4.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   4.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   4.6  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   6.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   6.1  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSS 178


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 107 TSPPGKPATSTASQNLSSPASSTSSTSS 134


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSS 178


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 480 TSIPTK--TNNGVTNINSPAQSTSSNMS 505
           TS P K  T+    N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTASQNLSSPASSTSSTSS 178


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 345 YLKNDSKKGWKKIYCVLRPSGLYYSP-KDK 373
           +L ++ ++ WK++     P G+Y+   KDK
Sbjct: 87  FLSHNKQQMWKELTAKYDPDGIYFEKYKDK 116


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 480 TSIPTKTNNGVT--NINSPAQSTSSNMS 505
           TS P K     T  N++SPA STSS  S
Sbjct: 151 TSPPGKPATSTTSQNLSSPASSTSSTSS 178


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.127    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,664
Number of Sequences: 317
Number of extensions: 8224
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 9
length of query: 1023
length of database: 114,650
effective HSP length: 64
effective length of query: 959
effective length of database: 94,362
effective search space: 90493158
effective search space used: 90493158
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)