Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000699-TA|BGIBMGA000699-PA|IPR000159|RA,
IPR001849|Pleckstrin-like
(1023 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 32 0.35
SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation protein... 31 0.62
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 30 1.4
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 30 1.9
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 30 1.9
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 30 1.9
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 29 2.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 2.5
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 3.3
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 29 3.3
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 29 4.4
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 29 4.4
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 29 4.4
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 28 7.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 28 7.6
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 32.3 bits (70), Expect = 0.35
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 761 ASRAGQCRVTARTSEPTRSFPRQPSLDSVHSEASRSSSLPSDKSIYGPQNVAYGACLVEL 820
+S Q +T S TRS P +PS S+ S++ + S ++ P + + G
Sbjct: 572 SSNPSQASLTEE-SLSTRSSPTKPSTTSLRSQSLVNRFASS--TLKAPSSSSKGVSNAAS 628
Query: 821 QTKKL-SSPSIQKKVITQTEPTKERTGSIKK 850
+ SSPSI KK+ T TK+ GS K
Sbjct: 629 SKQSFPSSPSISKKLETSRLSTKKLPGSTMK 659
>SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 402 KSPTDYCFAIKHPRLQQPKSVKFIKFLCAEDQQTMERWMTAMRIA---KHGRQLLENYRS 458
K+ +D F++ + + ++++ IK L +++ + R +RI K G+ L E RS
Sbjct: 135 KALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVDVKQGKALRERLRS 194
Query: 459 LVEELTQEDLD 469
L +E+ +E++D
Sbjct: 195 LADEIEEENID 205
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 559 PLTWMTRQLKEMVEKDDITSEADGIGDSGTLTRKPRKNRCDDST 602
P TW+T + + +I S+ DG+ D+G T R N C + T
Sbjct: 98 PYTWVTAKNITALSASEIWSDTDGV-DAGRSTSDIRTNACTNYT 140
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 169 QNQKDASFQQKADKIKLALERMREANIKKLFIKAFSMDGSSKSLLVDEKMTCGYVTRLLA 228
Q+ DA Q+ + ALE MRE + L + S K L+V T + L+
Sbjct: 671 QSTNDAHIMQENFSLHKALEVMRETS-SDLDKQLKDATASQKELIVQ---TSSFQKELVE 726
Query: 229 DKNHVNMEPKWAIVEHLPDLNMERVYEDHEMLVDNL 264
++ N AI + L ++ E +Y D E+LV NL
Sbjct: 727 ERERHN-----AISKRLQEI--ESLYRDRELLVTNL 755
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 35 NSTGDGSLALRPLEIVAPRIDTY--RFSMANLEETQDADLDAILGELCALDSEYDEELSR 92
N TGDG + P + P D+Y F + + +++ G+ ++ ++E S
Sbjct: 337 NYTGDGDYSSSPATLTCPADDSYFTSFPLPTMPSEAKGFIESGAGQPLGFNAPSNQEFSA 396
Query: 93 VSSGFASGSKDRVPRTTEPCTVRQEKDNSDAASGITRTESPDNDSAFSDTV 143
++ S V TT + Q + + SG + S + +A S +V
Sbjct: 397 NATALVSPGPHSV-STTINTNIVQATISQSSTSGSSSGSSSASTTASSSSV 446
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 17 EALLNEWLGELTVLTAGLNSTGDGSLALRPLEIVAPRIDTYRFSMANLEETQDADLDAIL 76
E +++ + ++ L +NS GDGS AL P + R+ T++ L + L + +
Sbjct: 678 ERMISAIVPVISRLYDSMNSVGDGSQAL-PKYVALERLKTWKLLFKLLPNDEFHLLPSAI 736
Query: 77 GELCALDSEYDEEL 90
E+ +D++L
Sbjct: 737 AEVVLFSKHHDDDL 750
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 60 SMANLEETQDADLDAILGELCALDSEYDEE-LSRVSSGFASGSKDRVPRTT 109
S AN+ TQD + D+ G + DSE DEE +++ ++ FA G K++ TT
Sbjct: 210 SFANIS-TQDFNSDSAAG---SSDSEEDEEEIAKKNAFFAEGDKEKSMMTT 256
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 771 ARTSEPTRSFPRQPSLDSVHSEASRSSSLPSDK----SIYGPQNVAYGACLVE-LQTKK- 824
A +S S Q S S+H SRSSS S K S GP N ++ A VE ++K
Sbjct: 1316 ADSSSTRTSLAHQDSRKSLHRHLSRSSSRASKKPSIVSTTGPFNESFSAKPVEPCASEKW 1375
Query: 825 -LSSPSIQKKVITQTE 839
L+S ++ K V+ +
Sbjct: 1376 WLNSTAVPKSVVQMND 1391
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 756 QQIEQASRAGQCRVTARTSEPTRSFPR--QPSLDSVHSEASRSSSLPSDKSI 805
Q++ Q + CRV S PT + R L+ +++E S +L DK +
Sbjct: 511 QELAQVTEINSCRVLQHRSNPTLKYERIKAAQLEMLNAENSALKALLEDKKV 562
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 270 ESKNKILFAERPDKISLFQAPEKFLLNDNDRGRSSEQDDHSRQVMLEEFFGQN 322
+ KN+ L + DKIS + PEK L ND+ + S + + + + G+N
Sbjct: 35 QQKNEELEKKAADKISRDELPEKQLAQSNDKDKHSVSNPPHKTLKSKRQKGKN 87
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 899 KLVDSNSNPPKEFLKDLQRVMRKKWQVAQKCKLEPATTPHEVLGFREYPLADDYKETSVS 958
K+ DSN P K L Q + RK + K A+TP + Y A K T
Sbjct: 307 KIEDSNKKPSKPSLLQTQPLKRKNYSPWYKNNF-GASTPASRVSRNPYTAAQPRKHTFYQ 365
Query: 959 MWVQ-EHYGSGVEDPFYENVYS 979
M+ E + + YE++ S
Sbjct: 366 MYENIEKFFTTENGGLYESIVS 387
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 4.4
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 302 RSSEQDDHSRQVMLEEFFGQNGAGASTVPSVSGHPVPPMEGPLYLKNDSKKGWKKIYCVL 361
R S++D RQ +L + G S +P+ G + ++D WK Y VL
Sbjct: 666 RKSKRDIFGRQKVLPTGISE---GLSNIPAKEAIKTADCHGWMRKRSDRYGVWKSRYFVL 722
Query: 362 RPSGL--YYSPKD-KVKTLKELVCLATFDTNEVYIGLNWKKKYKSPTDYCFAIKHPRLQQ 418
+ + L Y+S D K L ++ T+++ + K K A K +
Sbjct: 723 KGTRLSYYHSLNDASEKGLIDMTSHRVTKTDDIVLS-GGKTAIKLIPPAPGAAKAAVMFT 781
Query: 419 PKSVKFIKFLCAEDQQTMERWMTA 442
P V + F C E+ + + RW +A
Sbjct: 782 PPKVHY--FTC-ENNEELHRWSSA 802
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 341 EGPLYLKNDSK--KGWKKIYCVLRPSGLYYSPKDKVKTLKELVCLATFDTNEVYIGLNWK 398
E PL + S KGW K++ + PS L + P ++ T +E + + + N +++ ++K
Sbjct: 400 ETPLAIVKASSGTKGWPKMFTLPNPSSL-FQPGNEDYTSREAL-ESWWSENRLFLTRDYK 457
Query: 399 KKYKSPTDYCFAIKHPRLQQPKSVKFI 425
+K K A+K R K ++ +
Sbjct: 458 RKRKD------AVKRQRRAHEKRIRLV 478
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 454 ENYRSLVEELTQEDLDHLAHARSCSITSIPTKTNNGVTNINSPAQSTSSNMSV 506
E+ + LTQ +D L++ S SI TN N SP+ + SSN SV
Sbjct: 121 ESQKDTDASLTQ--MDQLSNTVSVKDLSINRNTNKKALNAVSPSLNLSSNSSV 171
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 411 IKHPRLQQPKSVKFIKFLCAEDQQTMERWMTAMRIAKHGRQLLENYRSLVEELTQEDLDH 470
IKH SVK + ED++ ER TA + LE+ EL Q +
Sbjct: 755 IKHVPTNTTSSVKLPQQPSNEDEK--ERITTADYADSTSLERLESQEPNRNELVQVGSSN 812
Query: 471 LAHARSCSITS---IPTKTNNGVTNINSPAQSTSSNMSVAN 508
+ S + P K + GV+N+++ +++ N ++ N
Sbjct: 813 AGNTTSVGMNEHEKSPVKLSKGVSNVDTSLGASTINTNILN 853
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,185,717
Number of Sequences: 5004
Number of extensions: 170652
Number of successful extensions: 435
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 432
Number of HSP's gapped (non-prelim): 19
length of query: 1023
length of database: 2,362,478
effective HSP length: 80
effective length of query: 943
effective length of database: 1,962,158
effective search space: 1850314994
effective search space used: 1850314994
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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