GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000698-TA|BGIBMGA000698-PA|IPR002048|Calcium-binding
EF-hand, IPR006573|NEUZ, IPR001220|Legume lectin, beta domain,
IPR011034|Formyl transferase, C-terminal-like
         (1612 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    27   0.94 
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              25   3.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   6.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    24   8.7  

>AF388659-3|AAK71993.1|  548|Apis mellifera
            1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 27.5 bits (58), Expect = 0.94
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 1421 HNDRYPEANDVDNLDNEIMDALTLETGNLPDLTEEQSSSLDESTRRDELWSEQLSIENLN 1480
            HN    + N   N D E ++ L +E+ N    ++E +   +E+   D L ++    EN  
Sbjct: 57   HNKEKSKNNHHCNQDTEKLNQLEIESDN----SKEVNDKKEENFIVDRLRNDLFECENKE 112

Query: 1481 YLNRILCFDQEMDEGQSLE 1499
              N  L F+++    +SL+
Sbjct: 113  KSNVCLKFEEQKRRKKSLD 131


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 145 RLFAVIDLYGQCV-QVSISQVN-GLRTAMELCLVQAEDDPNNDDTLTSSEIDV 195
           + F +I     CV  +++ +   GLR  + +C ++   D   +D      IDV
Sbjct: 2   KTFVIISAICVCVGALTLEEFQIGLRAVVPICRIETSIDQQKEDDFRDGNIDV 54


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 6.6
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 963 GPVTKIHTISMAGGVAA--SNTTTIPNKSIPKRQ 994
           GP T    ++ +   AA  + TTTIP + + KR+
Sbjct: 237 GPATPSAVVATSNATAAMTTGTTTIPTRRLRKRR 270


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 24.2 bits (50), Expect = 8.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 614 VNPEMCFHRVHGRNARLSRNRLTASRATVY 643
           +NP    + +   NARLSR+   AS+AT Y
Sbjct: 114 LNPNTEEYYIIEVNARLSRSSALASKATGY 143


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,653
Number of Sequences: 429
Number of extensions: 19470
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 5
length of query: 1612
length of database: 140,377
effective HSP length: 67
effective length of query: 1545
effective length of database: 111,634
effective search space: 172474530
effective search space used: 172474530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)