Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000696-TA|BGIBMGA000696-PA|IPR001849|Pleckstrin-like,
IPR001895|Guanine-nucleotide dissociation stimulator CDC25,
IPR008937|Ras guanine nucleotide exchange factor
(576 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 130 4e-31
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 113 8e-26
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 29 1.8
SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase |Schizosacchar... 29 1.8
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 29 1.8
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 29 2.3
SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|c... 29 2.3
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 29 2.3
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 5.4
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 5.4
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.4
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 27 9.4
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 27 9.4
SPBC119.04 |mei3||meiosis inducing protein Mei3 |Schizosaccharom... 27 9.4
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 130 bits (315), Expect = 4e-31
Identities = 81/255 (31%), Positives = 132/255 (51%), Gaps = 13/255 (5%)
Query: 87 SINQSWDDIVCS---ALRLSPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPN 143
S++ S D I+ L L P ++ QL +L+ F I + T W LN+ +
Sbjct: 644 SLHNSPDPIIYKDELVLLLPPREIAKQLCILEFQSFSHISRIQFLTKIWDNLNRFSPKEK 703
Query: 144 VVAFTKRFNRVSFWTVQEILNGQSPKARAEIMAHFIKVAKKLHELNNLHSLFAVISALHS 203
F + V+F T + I+ + P+ R ++A+FI+V L ELNN SLF++ISAL+S
Sbjct: 704 TSTFYLSNHLVNFVT-ETIVQEEEPRRRTNVLAYFIQVCDYLRELNNFASLFSIISALNS 762
Query: 204 ASIYRLTKTWACLSKKDKQQFDKLAELFGETDNWTALREYLKSISLPCIPYLGIFLTDLV 263
+ I+RL KTWA L+ K F+ L L N++ R+ L++ LPC+P+LG++ TDL
Sbjct: 763 SPIHRLRKTWANLNSKTLASFELLNNLTEARKNFSNYRDCLENCVLPCVPFLGVYFTDLT 822
Query: 264 YIDIAHPAGSPHRV-----TKMNIVLKALERYQSSEYEIAPLPHVANFLNSVRYIEELQK 318
++ + + + TK+ +L ++++QS Y P+ V LN V E
Sbjct: 823 FLKTGNKDNFQNMINFDKRTKVTRILNEIKKFQSVGYMFNPINEVQELLNEVISRERNTN 882
Query: 319 FVEDDQYKLSLKLEP 333
+ Y+ SL +EP
Sbjct: 883 NI----YQRSLTVEP 893
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 113 bits (271), Expect = 8e-26
Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 16/242 (6%)
Query: 103 SPDDVGNQLTLLDLPCFKAIKPEELTTCGWTKLNKLTVAPNVVAFTKRFNRVSFWTVQEI 162
+P++ +Q+TLL+ K I E W + + N + F+ F ++W + I
Sbjct: 752 TPEEFASQMTLLEFDYLKQIPSREWIFRSWVSRDSRSAVRNYINFSNCF---TYWIINCI 808
Query: 163 LNGQSPKARAEIMAHFIKVAKKLHELNNLHSLFAVISALHSASIYRLTKTWACLSKKDKQ 222
L ++ KAR +++ FI+ A K L N +L +++SAL+SA IYRL + + +D
Sbjct: 809 LEKKNTKARTAVISFFIQTAYKCLSLQNFSTLMSIVSALNSAPIYRLHAAYKLVKAEDII 868
Query: 223 QFDKLAELFGETDNWTALREYLKSISLPCIPYLGIFLTDLVYIDIAHP---AGSPHRVT- 278
L E+ N++ R L+ LPC+P+LG+ L+DL +ID +P SPH ++
Sbjct: 869 CLSGLREIVETKKNFSTYRALLRKAELPCVPFLGVILSDLTFIDEGNPDVLDSSPHLLSF 928
Query: 279 ----KMNIVLKALERYQSSEYEIAPLPHVANF-LNSVRYIEELQKFVEDDQYKLSLKLEP 333
++ V+ + R+QSS YE+ + ++ L+ R++ + ++ D SL LEP
Sbjct: 929 NKRHRLADVVADVCRFQSSSYEMQSNTDLQSYILHRCRFVNQDLSYLFDK----SLSLEP 984
Query: 334 PS 335
S
Sbjct: 985 RS 986
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 520 WADGDAADAFQLINHHSGTVYKFKAGSEYAAKQWIAKIEEVTNKIVKPLPAN 571
W++ D +D +L+ VY F+ + I EE T+++V+ L ++
Sbjct: 38 WSEEDESDFVELLEKELDKVYSFQKNKSAEVMERIRFCEEQTDEVVRRLDSD 89
>SPCC576.01c ||SPCPB1C11.04c|sulfonate dioxygenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 413
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 38 QSTIPLNSQQSFTKDDCACYYNYGHGENGSNRQHDSIFHYKTNSLP 83
Q +P +Q + T YGHG N +N+Q++SI H ++LP
Sbjct: 85 QHNLPPETQYAITHRFDPESSTYGHG-NRTNQQNNSILHPDLHTLP 129
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 44 NSQQSFTKDDCACYYNYGHGENGSNRQHDSIFHYKTNSLPAACSINQS 91
NSQ +DD + G NGS +++S+ H TN LP +NQS
Sbjct: 667 NSQHHHNRDDASS----GLSSNGS--ENESLEHEPTNELPQRPLVNQS 708
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 402 HTEDKMDEKTPAGSVNLLDDTLLESPSSVACAKMSQSLPHSNIT-KPEDIQCDFQGC 457
+TED + + G ++ D ACA + ++L +NIT PE QC + C
Sbjct: 531 YTEDMIQQLLTNGLISSTVDNDTYFGQCFACAVVKRTLERNNITASPECQQCYYNYC 587
>SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|chr
3|||Manual
Length = 197
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 183 KKLHELNNLHSLFAVISALHSASIYRLTKTWACLSKKDKQQFDKLA 228
K LH N++SL ++ A+ + S+ T W C++ +K F K+A
Sbjct: 78 KDLHP--NIYSLLRLLIAVLAVSVVFFT-AWGCVNPLEKSTFGKIA 120
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 263 VYIDIAHPAGSPHRVTKMNIVLKALERYQSSEYEIA-PLPHVANFLNSVRYIEELQKFVE 321
+ + +A P H + +N+V ++ Y A P+P A+ NS ++ L KFV
Sbjct: 258 IRVGLATPKSKAHVFSPVNVVPVSMPPV--GFYSAAQPVPQFADTANSTVFVGGLSKFVS 315
Query: 322 DDQYK 326
+++ K
Sbjct: 316 EEELK 320
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 310 VRYIEELQKFVEDDQYKLSLKLEPPSPVGSCAGSKESVK-ETVLQGNVTTFNISP 363
+R LQ F D+ SL + +PV + S +S+K L N+ TF +P
Sbjct: 1208 IRMNHSLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTLGQNINTFRENP 1262
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 395 SNIFGKSHTEDKMDEKTPAGSVNLLDDTLLESPSSVACAKMSQSLPHSNITKP 447
SNI + H+ + T + N +++++++ S A K+S SL NI+ P
Sbjct: 13 SNILKELHSTSIFTDSTTSQLHNGGENSVMDTEESSAIDKLSASLQQVNISSP 65
>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 563
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 205 SIYRLTKTWACLSKKDKQQFDKLAELFGET--DNWTALREYLKSISLPC 251
S+Y+L K + SK +K+ FD + F T + EY+++ +L C
Sbjct: 127 SVYKLRKAHSIFSKINKRHFDHFSAAFHSTGRSDVDLANEYVQTGTLLC 175
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 455 QGCVKRKTILKEGRKISLSSWQRYWLQMSGNMLFFY-GAKS 494
+G ++ ++ + K+ W + WL +S N L Y G+KS
Sbjct: 22 KGIIRSGWVMLKEDKMKYLPWTKKWLVLSSNSLSIYKGSKS 62
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 26.6 bits (56), Expect = 9.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 522 DGDAADAFQLINHHSGTVYKFKAGSEYAAKQWIAK-IEEVTNKIVKPLPANLMSFE 576
D D+A+ +LI +V + E A I I+ + + KPLP +LMS E
Sbjct: 189 DNDSAEMLRLILKTFKSVIALELPPELLANDMILSWIQLLLAVVQKPLPESLMSLE 244
>SPBC119.04 |mei3||meiosis inducing protein Mei3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 148
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 102 LSPDDVGNQLTLLDLPCFKAIKPEE 126
LSP D+ N+LT+LDL F +P E
Sbjct: 113 LSPSDLTNELTILDL--FHVPRPNE 135
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,836,930
Number of Sequences: 5004
Number of extensions: 126651
Number of successful extensions: 323
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 315
Number of HSP's gapped (non-prelim): 15
length of query: 576
length of database: 2,362,478
effective HSP length: 77
effective length of query: 499
effective length of database: 1,977,170
effective search space: 986607830
effective search space used: 986607830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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