GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000696-TA|BGIBMGA000696-PA|IPR001849|Pleckstrin-like,
IPR001895|Guanine-nucleotide dissociation stimulator CDC25,
IPR008937|Ras guanine nucleotide exchange factor
         (576 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    25   1.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    25   1.7  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   9.1  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 508 CKVLTLVGWIAVWADGDAADA 528
           C +L +V W++ W D  A  A
Sbjct: 252 CCMLVIVSWVSFWLDQSAVPA 272


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 508 CKVLTLVGWIAVWADGDAADA 528
           C +L +V W++ W D  A  A
Sbjct: 252 CCMLVIVSWVSFWLDQSAVPA 272


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 17  KHEDEENWPLEDKPCKINHKKQSTIPLNSQ 46
           K +DE +W LE++  + +  K+S    N Q
Sbjct: 436 KFDDEAHWELEEESLQGSKIKESNSCSNDQ 465


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,708
Number of Sequences: 429
Number of extensions: 7337
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 3
length of query: 576
length of database: 140,377
effective HSP length: 61
effective length of query: 515
effective length of database: 114,208
effective search space: 58817120
effective search space used: 58817120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)