Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000695-TA|BGIBMGA000695-PA|IPR001395|Aldo/keto reductase
         (262 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   6.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.5  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 10  TTFVLNNGIMMPSIGLGTYRIRQS 33
           T F+LNN I+    G GT  ++++
Sbjct: 203 TVFILNNEIIRSIQGTGTIILKKT 226


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 148 WHPYYTQSSLYKFCKQ 163
           W P++TQ  LY + ++
Sbjct: 283 WAPFHTQRLLYVYAQE 298


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.133    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,515
Number of Sequences: 429
Number of extensions: 2896
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 262
length of database: 140,377
effective HSP length: 57
effective length of query: 205
effective length of database: 115,924
effective search space: 23764420
effective search space used: 23764420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)