Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000694-TA|BGIBMGA000694-PA|IPR009053|Prefoldin,
IPR002777|Prefoldin beta-like
(138 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73103-1|CAA97424.1| 117|Caenorhabditis elegans Hypothetical pr... 47 6e-06
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 33 0.056
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 33 0.056
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 33 0.056
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 33 0.056
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 32 0.13
U97017-6|AAB52362.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 30 0.52
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 30 0.69
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 30 0.69
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 30 0.69
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 30 0.69
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 30 0.69
U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical pr... 29 0.91
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 29 0.91
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 29 1.2
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 1.6
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 1.6
Z71261-4|CAA95804.1| 126|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF125463-3|AAD12860.1| 163|Caenorhabditis elegans Hypothetical ... 28 2.1
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 28 2.1
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 28 2.1
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 28 2.8
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 28 2.8
AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical... 28 2.8
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 27 3.7
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 27 3.7
Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 27 4.8
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 27 4.8
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 27 4.8
AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical ... 27 4.8
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 27 4.8
Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical p... 27 6.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 6.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 6.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 6.4
U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 27 6.4
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 27 6.4
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 27 6.4
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 27 6.4
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 27 6.4
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 26 8.5
>Z73103-1|CAA97424.1| 117|Caenorhabditis elegans Hypothetical
protein C08F8.1 protein.
Length = 117
Score = 46.8 bits (106), Expect = 6e-06
Identities = 32/115 (27%), Positives = 54/115 (46%)
Query: 6 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 65
D E+ +AF DLQ ET+ I + V + + T++ + L K Y S+
Sbjct: 3 DEEISKAFRDLQFKTNETRMRIVQGEQNKKVNYQKMRISESTKKNLVDLDENLKYYRSVG 62
Query: 66 RMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
RMF+ +D + +I+ + +K L L E+E+N+R+LIQ +R
Sbjct: 63 RMFLLTDKPAEISRHEAEAKQSKEKIEAIEKQKDYLEKGLVEAETNLRELIQSRR 117
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 33.5 bits (73), Expect = 0.056
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 17 QVLMIETKK--TIENIDHQLAVL-GRMQMHT-NLTQREIDVLPPGTKTYESMARM-FVQS 71
+ +++ TK TI+ +++VL G ++ T + +RE + + T E ++++ ++
Sbjct: 967 EAMLVATKHATTIDQQTRRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEA 1026
Query: 72 DLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNE 124
+LE +K L ++ + +L N K L+ NE I+DL Q R N+
Sbjct: 1027 ELEKLKDELA----VMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANK 1075
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 33.5 bits (73), Expect = 0.056
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 17 QVLMIETKK--TIENIDHQLAVL-GRMQMHT-NLTQREIDVLPPGTKTYESMARM-FVQS 71
+ +++ TK TI+ +++VL G ++ T + +RE + + T E ++++ ++
Sbjct: 967 EAMLVATKHATTIDQQTRRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEA 1026
Query: 72 DLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNE 124
+LE +K L ++ + +L N K L+ NE I+DL Q R N+
Sbjct: 1027 ELEKLKDELA----VMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANK 1075
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 33.5 bits (73), Expect = 0.056
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 17 QVLMIETKK--TIENIDHQLAVL-GRMQMHT-NLTQREIDVLPPGTKTYESMARM-FVQS 71
+ +++ TK TI+ +++VL G ++ T + +RE + + T E ++++ ++
Sbjct: 727 EAMLVATKHATTIDQQTRRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEA 786
Query: 72 DLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNE 124
+LE +K L ++ + +L N K L+ NE I+DL Q R N+
Sbjct: 787 ELEKLKDELA----VMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANK 835
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 33.5 bits (73), Expect = 0.056
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 17 QVLMIETKK--TIENIDHQLAVL-GRMQMHT-NLTQREIDVLPPGTKTYESMARM-FVQS 71
+ +++ TK TI+ +++VL G ++ T + +RE + + T E ++++ ++
Sbjct: 967 EAMLVATKHATTIDQQTRRISVLEGDVEKLTAGIAERESSINALESNTMELISKLETTEA 1026
Query: 72 DLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNE 124
+LE +K L ++ + +L N K L+ NE I+DL Q R N+
Sbjct: 1027 ELEKLKDELA----VMLKQNSELKNGKEGLSEKWNEERKKIQDLADQLREANK 1075
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.13
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 7 LELKQAFV-DLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 65
LELK+ +LQ+ K +N+ + + T Q+ D + TK E A
Sbjct: 218 LELKKKHEQELQMKNSTIMKLEDNVKFNNSSNEQFSKMTTENQQLKDWMATKTKEVEHAA 277
Query: 66 RMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNH--TLNESESNIRDLIQQK 119
+M ++ +HI++ L+ KT + +D+ ++H L E N+++ ++QK
Sbjct: 278 KMMLELKQKHIEE-LQMKTTQITKLENDVKLNGNFMDHISELTEENHNLKEQLKQK 332
>U97017-6|AAB52362.1| 374|Caenorhabditis elegans Hypothetical
protein F47B3.7 protein.
Length = 374
Score = 30.7 bits (66), Expect = 0.39
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 85 NTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQP--AAESNP 133
NT SR ++ + ++HTLN+ S +RD + KN N P A +SNP
Sbjct: 41 NTAQSRRMHVSIVRPWVHHTLNKGVSKLRDEFSEVANKNPNVPVDAFKSNP 91
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 30.3 bits (65), Expect = 0.52
Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 26 TIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLR--QK 83
++EN D L V Q N+ E+ K + ++ + +E + + Q
Sbjct: 281 SLENKDDYLLVTVEFQKRKNILFSELKKKNEEIKMLQESFNVYQKDSIEKVMEKFLELQH 340
Query: 84 TNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNEN 125
N + +DD N+ LN+ N ++++ + ++ ++N N
Sbjct: 341 QNLTVFSVDDTNSISTELNNDRNVAKNDKSEGVESLMLENFN 382
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 77 KQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPIPS 136
KQ++ + T+ +++ + N+ +N+S S R+++ KR ++E+ AA S I S
Sbjct: 305 KQSIMLQKETVKNQLVETINKLKKEGEQINKSLSKDREVLDAKRKEHEDSKAANSKDIQS 364
Query: 137 K 137
+
Sbjct: 365 Q 365
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 77 KQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPIPS 136
KQ++ + T+ +++ + N+ +N+S S R+++ KR ++E+ AA S I S
Sbjct: 305 KQSIMLQKETVKNQLVETINKLKKEGEQINKSLSKDREVLDAKRKEHEDSKAANSKDIQS 364
Query: 137 K 137
+
Sbjct: 365 Q 365
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 77 KQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPIPS 136
KQ++ + T+ +++ + N+ +N+S S R+++ KR ++E+ AA S I S
Sbjct: 305 KQSIMLQKETVKNQLVETINKLKKEGEQINKSLSKDREVLDAKRKEHEDSKAANSKDIQS 364
Query: 137 K 137
+
Sbjct: 365 Q 365
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 29.9 bits (64), Expect = 0.69
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 53 VLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVC--LNHTLNESES 110
VL P YE A + VQSD +L + LI + +L ++ + NH+ N
Sbjct: 206 VLDPAI-AYEISATVTVQSD-----PDLEIDYDNLIQSLKELQDQAIVRPANHSSNRLSE 259
Query: 111 NIRDLIQQKRMKNENQPAAES 131
R L+ ++R + N P +S
Sbjct: 260 ETRKLLNKRRFMDRNDPQFKS 280
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 77 KQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPIPS 136
KQ++ + T+ +++ + N+ +N+S S R+++ KR ++E+ AA S I S
Sbjct: 305 KQSIMLQKETVKNQLVETINKLKKEGEQINKSLSKDREVLDAKRKEHEDSKAANSKDIQS 364
Query: 137 K 137
+
Sbjct: 365 Q 365
>U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical
protein C06A8.5 protein.
Length = 479
Score = 29.5 bits (63), Expect = 0.91
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 71 SDLEHIKQNLRQKTNTLISRIDDLNNR------KVCLNHTLNESESNIRDLIQQKRMKN 123
+D+E +K+ LRQK L DDL N+ K+ L E +RDL + KN
Sbjct: 12 ADVERLKKILRQKDEMLEEMEDDLKNQGKPCSSKLSLEERAQELSEQLRDLHVEMDGKN 70
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 29.5 bits (63), Expect = 0.91
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 70 QSDLEHIKQNLRQKTNTLI-SRIDDLNNRKVCLNHTLNE 107
QSDLE IK N++ N+L+ S +DL+ + NHT++E
Sbjct: 157 QSDLERIKNNIQIVNNSLVNSAFNDLSLLEF-ENHTIDE 194
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 6 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVL---PPGTKTYE 62
DLE+ Q F L + ETK +E ++ + +M T+ T E+ + P T T
Sbjct: 188 DLEVVQLFKKLNLSKEETKSIVERVEQVVREKLMSKMDTSSTTTEVTTVVTTPSTTTTTT 247
Query: 63 SMARMFVQSDLEHIKQNLRQK 83
S + + E I++ + ++
Sbjct: 248 STTQAPTTTTKEFIEEEIEEE 268
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 SDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQ 126
S+L +K L N LI+++D+LN+ + L N S + + +Q++ K+E +
Sbjct: 344 SELLDMKNALNIVKNDLINQVDELNSENMILRDE-NLSRQMVSEKMQEQITKHEEE 398
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 SDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQ 126
S+L +K L N LI+++D+LN+ + L N S + + +Q++ K+E +
Sbjct: 326 SELLDMKNALNIVKNDLINQVDELNSENMILRDE-NLSRQMVSEKMQEQITKHEEE 380
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 71 SDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQ 126
S+L +K L N LI+++D+LN+ + L N S + + +Q++ K+E +
Sbjct: 344 SELLDMKNALNIVKNDLINQVDELNSENMILRDE-NLSRQMVSEKMQEQITKHEEE 398
>Z71261-4|CAA95804.1| 126|Caenorhabditis elegans Hypothetical
protein F21C3.5 protein.
Length = 126
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 25 KTIENIDHQLAVLGRMQMHTNLTQR-----EIDVLPPGTKTYESMARMFVQSDLEHIKQN 79
+T+E D + R +M LT+ E+D++ +K Y+ + + V+ DLE +
Sbjct: 15 RTLEK-DREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARST 73
Query: 80 LRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAES 131
+ ++ + S + ++ E + ++ QK + Q AA++
Sbjct: 74 VEKRLEFIDSETKRVEASISDISKKCTEQRDKVMNM--QKSFQMMAQAAAQA 123
>AF125463-3|AAD12860.1| 163|Caenorhabditis elegans Hypothetical
protein Y49F6C.8 protein.
Length = 163
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 72 DLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKN 123
D +H+++ +R + T R ++L + + T+ ES + D Q+KR KN
Sbjct: 111 DRQHMEEEIRIQNWTKEDR-EELESGLAVMRQTIQESWKDAADCEQEKRSKN 161
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 56 PGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHT---LNESESNI 112
PGT T + A+ + +E +++ LR+ + R L+ +K L LNE+ I
Sbjct: 635 PGTLTRSTSAQNNMHKRIEELEEALRESVSITAEREVHLSQQKHHLQQVSSQLNEARKEI 694
Query: 113 RDLIQQKRMKNE 124
+L + K+ +E
Sbjct: 695 TELRRTKQNPSE 706
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 28.3 bits (60), Expect = 2.1
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 5 VDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLT-QREIDVLPPGTKTYES 63
++++LK +++ L E KK I+ + + ++ T+++ Q E ++ T+T E
Sbjct: 416 LEIQLKSELKNVEHLNKEHKKAIDLANEISKLKTEIERETSISKQLEKEISQLRTETDEM 475
Query: 64 MARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKN 123
+ + LE LR T + + N + N L+ + LIQ K
Sbjct: 476 --NIVITQSLEMENLQLRDVTK----KFETENASLLKTNQQLSIQNEEQKRLIQVLLEKQ 529
Query: 124 ENQPAAESNPIPS 136
+ P++ P+PS
Sbjct: 530 QTAPSSSDFPVPS 542
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 79 NLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPI 134
N +T S + D+ N+KV + E +++ QQK +N ++P++ S+P+
Sbjct: 151 NSSDSPSTRPSFLPDVKNQKVVEQELM---EQRMKEAAQQKIHRNGHRPSSSSHPL 203
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 79 NLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPI 134
N +T S + D+ N+KV + E +++ QQK +N ++P++ S+P+
Sbjct: 325 NSSDSPSTRPSFLPDVKNQKVVEQELM---EQRMKEAAQQKIHRNGHRPSSSSHPL 377
>AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 22 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMF--VQSDLEHIKQN 79
E +KT+E ++ + ++ N +++ + + YE ++DLE+ Q
Sbjct: 896 EFRKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERKIEQLNMEKTDLENENQK 955
Query: 80 LRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDL 115
LR+ N S +L + + ++E ++ I+ L
Sbjct: 956 LRETQNRQDSHYSNLEKEVMEKSSLIDELQNQIQKL 991
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 27.5 bits (58), Expect = 3.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 53 VLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVC--LNHTLNESES 110
VL P Y A + VQSD +L + LI + +L ++ + NH+ N
Sbjct: 377 VLDPAI-AYAISATVTVQSD-----PDLDTDYDNLIQSLKELQDQAIVRPANHSSNRLSE 430
Query: 111 NIRDLIQQKRMKNENQPAAES 131
R L+ ++R + N P +S
Sbjct: 431 ETRKLLNKRRFMDRNDPQFKS 451
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 27.5 bits (58), Expect = 3.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 53 VLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVC--LNHTLNESES 110
VL P Y A + VQSD +L + LI + +L ++ + NH+ N
Sbjct: 116 VLDPAI-AYAISATVTVQSD-----PDLDTDYDNLIQSLKELQDQAIVRPANHSSNRLSE 169
Query: 111 NIRDLIQQKRMKNENQPAAES 131
R L+ ++R + N P +S
Sbjct: 170 ETRKLLNKRRFMDRNDPQFKS 190
>Z75531-7|CAA99798.2| 316|Caenorhabditis elegans Hypothetical
protein C54D10.8 protein.
Length = 316
Score = 27.1 bits (57), Expect = 4.8
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 22 ETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTY---ESMARMFVQSDLEHIKQ 78
ETK+++E +D L ++H + + K + ++ ++ + + E ++
Sbjct: 87 ETKRSLEKMDEDLE--RSRELHRIKIAKINNQFMQNKKDFAEQDANRKLEILAQEERAQE 144
Query: 79 NLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQK 119
LR+ + L +++L +NE NIR L+Q K
Sbjct: 145 RLREIEDQLARDLEELRRCDQQRRQEMNEQMENIRRLLQMK 185
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 85 NTLISRIDDLNNRKVCLNHTLNESESNIRDL 115
N L SR+ +L K +NH E+E+ I L
Sbjct: 112 NDLFSRLCNLEEEKYDINHITTETETTINQL 142
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.1 bits (57), Expect = 4.8
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 36 VLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSD---LEHIKQNLRQKTNTLISRID 92
+ G++Q H N Q E+ S + S +HI LRQ N +D
Sbjct: 624 IRGKLQKHINFEQ-ELKANENRLDDIRSTGEQIIDSGHFAADHIGDRLRQVNNLWNELVD 682
Query: 93 DLNNRKVCLNHTLNESE--SNIRDLIQQKRMKNENQPAAE 130
N + L NE + NI D ++ + E Q A+E
Sbjct: 683 ATNKKGAKLREAGNEQQFNRNIED-VEAWLSELEGQVASE 721
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 64 MARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKN 123
M Q EH+ Q +Q SR +LN ++V + +N+S SNI ++ M+
Sbjct: 627 MTETIPQQSNEHVSQQQQQIAQ---SRPMNLNQQQV-IETPVNQSISNIFNISTANTMQQ 682
Query: 124 ENQPAAESNP 133
+ Q + P
Sbjct: 683 QQQQNVQQQP 692
>AF077531-4|AAC64611.1| 437|Caenorhabditis elegans Hypothetical
protein F13C5.1 protein.
Length = 437
Score = 27.1 bits (57), Expect = 4.8
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 55 PPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDL-NNRKVCLNHTLNESESNIR 113
PP T +Q +E QNL + + + L NN +V L +TL ++ R
Sbjct: 233 PPKTMLSRKSTLTAIQEGVELADQNLTESEKKVKFEFNHLLNNAQVKLVYTLTNRRASKR 292
Query: 114 DLIQQKRMKN 123
QQK N
Sbjct: 293 KAPQQKVAPN 302
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 85 NTLISRIDDLNNRKVCLNHTLNESESNIRDL 115
N L SR+ +L K +NH E+E+ I L
Sbjct: 112 NDLFSRLCNLEEEKYDINHITTETETTINQL 142
>Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical
protein C17H1.8 protein.
Length = 304
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/85 (16%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 3 KTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREI---DVLPPGTK 59
K+ + EL+ +LQ+ + K++I+N++H + + + + +++ + E+ +++ +
Sbjct: 28 KSNNSELENKRNELQLEEEQLKRSIQNMEHDMRMQAKEEQRSDIEKHELTKREIIEQHQE 87
Query: 60 TYESMARMFVQSDLEHIKQNLRQKT 84
T ++ R +++ +Q +T
Sbjct: 88 TISNLNRSMSEAEKSMREQKFIHQT 112
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 69 VQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQ 118
+QS H Q L+ + + ++ NNRK L + L S +RD Q+
Sbjct: 1885 IQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQR 1934
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 82 QKTNTLI-SRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
+ TNT + +++ N+R L T+N+ S +RDL Q R
Sbjct: 1250 ETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVR 1289
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 69 VQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQ 118
+QS H Q L+ + + ++ NNRK L + L S +RD Q+
Sbjct: 1958 IQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQR 2007
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 82 QKTNTLI-SRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
+ TNT + +++ N+R L T+N+ S +RDL Q R
Sbjct: 1323 ETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVR 1362
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 69 VQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQ 118
+QS H Q L+ + + ++ NNRK L + L S +RD Q+
Sbjct: 1958 IQSKTSHEYQLLKDQLLNTQNELNGANNRKQQLENELLNVRSEVRDYKQR 2007
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 82 QKTNTLI-SRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
+ TNT + +++ N+R L T+N+ S +RDL Q R
Sbjct: 1323 ETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVR 1362
>U39744-4|AAK18885.4| 389|Caenorhabditis elegans Hypothetical
protein C03F11.4 protein.
Length = 389
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 3 KTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYE 62
K L+ +A+ Q M ++ I+ D Q ++ ++E LPP K +
Sbjct: 124 KKKKLDADKAYELRQEQMKIRQEKIDASDRNKIYRRLAQTAVDMLRKEERKLPPEIKQLD 183
Query: 63 SMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKV 99
+V++ +++ NLR + L +R+D+++ + +
Sbjct: 184 EDLEYYVENSKFYLRINLRDR--YLETRVDEISEKYI 218
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 1 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREI 51
M++ ++L + F D M+ K+T +++ H LAV G + + T RE+
Sbjct: 1097 MSQIQFIQLWKTFYD----MLSGKETEQSVFHSLAVTGTLLLQLGETHREL 1143
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 1 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREI 51
M++ ++L + F D M+ K+T +++ H LAV G + + T RE+
Sbjct: 1097 MSQIQFIQLWKTFYD----MLSGKETEQSVFHSLAVTGTLLLQLGETHREL 1143
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 1 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREI 51
M++ ++L + F D M+ K+T +++ H LAV G + + T RE+
Sbjct: 1097 MSQIQFIQLWKTFYD----MLSGKETEQSVFHSLAVTGTLLLQLGETHREL 1143
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 1 MAKTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREI 51
M++ ++L + F D M+ K+T +++ H LAV G + + T RE+
Sbjct: 1097 MSQIQFIQLWKTFYD----MLSGKETEQSVFHSLAVTGTLLLQLGETHREL 1143
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 97 RKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPIPS 136
R+ L L+ SE+ I+ Q +RMKN+ P+ S PI S
Sbjct: 139 RRYQLAQQLSLSETQIKIWFQNRRMKNKRCPS--STPIQS 176
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 74 EHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNP 133
EH+ +N + + R + + + N T N +E +I + + K +++ Q E
Sbjct: 177 EHLDENDLFAIDEQVERTIKMGEKYLVANETTNAAERDIEEFFETKPKESDEQKKEEPRK 236
Query: 134 I 134
+
Sbjct: 237 V 237
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.128 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,117,136
Number of Sequences: 27539
Number of extensions: 115271
Number of successful extensions: 574
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 535
Number of HSP's gapped (non-prelim): 61
length of query: 138
length of database: 12,573,161
effective HSP length: 74
effective length of query: 64
effective length of database: 10,535,275
effective search space: 674257600
effective search space used: 674257600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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