Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000694-TA|BGIBMGA000694-PA|IPR009053|Prefoldin,
IPR002777|Prefoldin beta-like
(138 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1D7.01 |||prefoldin subunit 1 |Schizosaccharomyces pombe|chr... 39 3e-04
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 33 0.012
SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr 1|||... 32 0.037
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.049
SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyce... 30 0.11
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 30 0.15
SPBC25H2.15 |||programmed cell death protein homolog|Schizosacch... 29 0.20
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 29 0.26
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.26
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 0.46
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 0.80
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 1.1
SPCC1672.05c |||tyrosine-tRNA ligase |Schizosaccharomyces pombe|... 26 1.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 1.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 2.4
SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4 |S... 26 2.4
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 25 3.2
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 25 3.2
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 3.2
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 25 4.2
SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr ... 25 4.2
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 25 4.2
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 4.2
SPBC3B9.06c |apg3||autophagy associated protein Apg3 |Schizosacc... 25 5.6
SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 5.6
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 25 5.6
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 24 7.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 24 7.4
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 24 9.8
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 24 9.8
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 24 9.8
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 24 9.8
>SPBC1D7.01 |||prefoldin subunit 1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 112
Score = 38.7 bits (86), Expect = 3e-04
Identities = 20/100 (20%), Positives = 52/100 (52%)
Query: 16 LQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEH 75
+Q +++++ + I Q+A R + L ++E++ + Y S+ +MF++SDL
Sbjct: 8 IQEKAVDSQQQLRTIMVQIAAKERALKISELAKKELEDVGEDKAVYTSLGKMFMKSDLAS 67
Query: 76 IKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDL 115
++ +L + +L I+ L ++ T + +E +++ +
Sbjct: 68 VRTHLDAEMASLREDIEALQKKQTYHETTASNAEQHLQKI 107
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.5 bits (73), Expect = 0.012
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 39 RMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRK 98
R+Q +L +EID+L K+Y+ + + + + K ++ L+ +D+ +
Sbjct: 382 RLQRQKSLATQEIDLLRENLKSYDDEEAILSEKNTDMKK---LERIEGLVKLVDEYKLKL 438
Query: 99 VCLNHTLNESESNIRDLIQQKRMKNENQPA 128
+ +L+ E++ +Q++R KNE++ A
Sbjct: 439 ESMPVSLDVDETSDEVSLQKRRRKNEHKDA 468
>SPAC823.05c |tlg2||SNARE Tlg2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 31.9 bits (69), Expect = 0.037
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 7 LELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREI 51
+EL Q F DLQVL+IE ++ ID + + Q+H ++E+
Sbjct: 224 IELAQMFQDLQVLVIEQGALVDRIDFNIE---QTQVHAKSAEKEL 265
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.5 bits (68), Expect = 0.049
Identities = 24/122 (19%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 12 AFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA--RMFV 69
AF + + +I K E+I + ++ + L E +L + Y+ + R +
Sbjct: 33 AFTSILIPLISKSKDYESIKND-RIVTEVNYEQQLRNSEKKLLQSNER-YDLLEDERKLL 90
Query: 70 QSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNES-ESNIRDLIQQKRMKNENQPA 128
+++L IK+ LR+K+++ + + D ++ K +N L ++ + N++ Q + + ++ +
Sbjct: 91 ENELSQIKEYLREKSSSYDTVLHDCSSLK-SVNEALKQAQDQNLKQTAQLQNLLSDKEKE 149
Query: 129 AE 130
E
Sbjct: 150 VE 151
Score = 27.1 bits (57), Expect = 1.1
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 8 ELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTN-----------LTQREIDVLPP 56
EL +++ LQ + K ++N+ QL++ +N L D L
Sbjct: 741 ELDESYKSLQEQLASKKIEVQNVSSQLSICNSQLEQSNHIVDNLKSENLLLTSVKDKLKA 800
Query: 57 GTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRD 114
ES +Q D H+K + + +D +N+R + L++ L + S + +
Sbjct: 801 DLSNLESKLSS-LQQDNFHMKAQIESSNQEYTATVDSMNSRILELSNDLRVANSKLSE 857
>SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 214
Score = 30.3 bits (65), Expect = 0.11
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 48 QREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRID 92
QRE L GT + S + +Q++LE +K LR T I++ID
Sbjct: 54 QRETLQLAIGTSSATSYRSVLMQTELERVKFVLRSYMRTRINKID 98
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 29.9 bits (64), Expect = 0.15
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 57 GTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 116
GTK YE +AR + Q LE +Q+ + L + D + C + + S+ +D
Sbjct: 146 GTKVYEELARKYPQHSLESWRQHYKYMKKRL-PPVSDSDESNYC-QRIIVKPYSSQKDYT 203
Query: 117 QQKRMKNENQPAAES 131
Q + + P ++S
Sbjct: 204 QSTHEQTLSSPISKS 218
>SPBC25H2.15 |||programmed cell death protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.5 bits (63), Expect = 0.20
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 43 HTNLTQREIDVLPPGTKTY-----ESMARMFVQSDLEHIKQN 79
H LT + V PP T+TY E+ MF+ DLE++ QN
Sbjct: 202 HIALTTSGMSVHPPVTETYTYPVTEAFQGMFLGLDLEYVPQN 243
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 29.1 bits (62), Expect = 0.26
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 91 IDDLNNRKVCLNHTLNESESNIRDL-IQQKRMKNENQPAAESNPIP 135
+D++N R+ + L E + I ++ ++K+E+Q ES PIP
Sbjct: 903 VDEINARRANYSTRLEEYQRQINSYNVRVAQIKSEHQRRCESQPIP 948
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.1 bits (62), Expect = 0.26
Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 12 AFVDLQVLMIETKKTIENIDHQLAVLGRMQM-HTNLTQREIDVLPPGTKTYESMARMF-- 68
+F DL L+ K + H++ + + + +L +E V K E + +
Sbjct: 298 SFTDLDTLLNWPKYVFHH--HKIHLADTIPLVFLDLKPKEYTVDLETPKLVEELTKQLHV 355
Query: 69 VQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNI 112
+S L+ + +Q + +L SR+D+LN+ L + ++E N+
Sbjct: 356 AESTLKENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRRNL 399
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 28.3 bits (60), Expect = 0.46
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 20 MIETKKTIENIDHQLAVLGR-MQMHTNLTQREIDVLPPGTKTYESMARMFVQ--SDLEHI 76
+++ KTIEN+ + R + + +LT+ +VL P K YE ++++ + SDL +
Sbjct: 686 LLKHSKTIENVSSNFSKKNRNVVVSESLTKSMEEVLTP-EKFYERLSKLLEEENSDLGEL 744
Query: 77 KQNL 80
K +L
Sbjct: 745 KNHL 748
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 0.80
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 60 TYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQK 119
T +S+ SD E Q+L ++ N + +DL+N LN L + E N DL++ +
Sbjct: 3964 TKDSVVSENENSDSEEENQDLDEEVNDIP---EDLSNS---LNEKLWD-EPNEEDLLETE 4016
Query: 120 RMKNENQPAAESNPIPSKK 138
+ NE A + + SK+
Sbjct: 4017 QKSNEQSAANNESDLVSKE 4035
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 27.1 bits (57), Expect = 1.1
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 50 EIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESE 109
E +LP +YE++ +F + D +H+ ++ LI + D + L H +N+
Sbjct: 364 ESQILPCVLHSYETLTNVFHRDDSKHLYESAVDHGRRLIMKFSD-SELHTFLFHCVNKIV 422
Query: 110 SN 111
+N
Sbjct: 423 AN 424
>SPCC1672.05c |||tyrosine-tRNA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 401
Score = 26.2 bits (55), Expect = 1.8
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 59 KTYESMARMFVQSDL--EHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 116
KTYE + + + L + +K L NTL++ + + + L+ L + + +DL
Sbjct: 294 KTYEEVEKAYKDLTLSPQDLKLGLESSVNTLLAGVQEQLKQYPDLDSILKAAYPDPKDLK 353
Query: 117 QQKRMKNENQPAAE 130
+ + K +++ A+
Sbjct: 354 KAMKQKKQDKKNAK 367
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 1.8
Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 13 FVDLQVLMIETKKTIENIDHQLAVLGR--MQMHTNLTQREIDVLPPGTKTYESMARMFVQ 70
+ +L ++ +T K++E+ +QL + + ++ QR ++ L T Y + Q
Sbjct: 1055 YENLLLISSQTNKSLEDKTNQLKYIEKNVQKLLDEKDQRNVE-LEELTSKYGKLGEENAQ 1113
Query: 71 --SDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNE 124
+L +++ +++ + + +DDL + L NE I L +Q NE
Sbjct: 1114 IKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQLTNEKNELIVSL-EQSNSNNE 1168
Score = 24.6 bits (51), Expect = 5.6
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 62 ESMARMF-VQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
ES++ M ++S L+ K+ ++ +T+ ++ K LN+ +S IRDL +
Sbjct: 1492 ESLSLMENIKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIE 1551
Query: 121 MKNENQPAAESNPI 134
N N A E + +
Sbjct: 1552 QLN-NLLAEEKSAV 1564
Score = 23.8 bits (49), Expect = 9.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 77 KQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQK 119
K N K N S I DL+ LN+ L E +S ++ L +K
Sbjct: 1529 KNNYEGKLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEK 1571
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 2.4
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 7 LELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMAR 66
L+L + DL+ L + IE Q L +Q T + + P + +
Sbjct: 422 LKLTEEIQDLETLN-QLNTEIEA--RQSEKLNEVQEETQRLSQLLISSQPALTEVKHLKL 478
Query: 67 MFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQ 126
S E ++ N + + ++ ID+LN+ K+ L+ + E ES+++D + + + + Q
Sbjct: 479 CLSDSQEELLQLNAKLEKANIV--IDELNSAKLKLSKQV-EEESSMKDDLTEMNQRLKEQ 535
Query: 127 PAAESNPIPSK 137
+ N + S+
Sbjct: 536 IESYENEVNSE 546
>SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 103 HTLNESESNIRDLIQQKRMKNENQPAAESNPIPS 136
HT S I+D+I +R KN+ + A S+ PS
Sbjct: 243 HTSAGMSSLIQDMINSQRTKNKVEEAIVSSSAPS 276
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 3.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 82 QKTNTLISRIDDLNNRKVCLNHTLNE 107
QKT + + R+ D N+R++CL T E
Sbjct: 92 QKTGSELFRLHDRNDREMCLAPTHEE 117
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 57 GTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLI 116
G KT +MF + D+ H N ++KT +++ N V +++ NE I+DL+
Sbjct: 407 GVKTVH-FDKMFYRKDIAHHALNPKRKTREILT----YENSGVSVDNG-NEFVQRIKDLV 460
Query: 117 QQKR 120
+ R
Sbjct: 461 KSTR 464
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 3.2
Identities = 18/101 (17%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 5 VDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESM 64
+ E+ + L++L +E ++ E+ + + +++ ++ R+I+ + ++
Sbjct: 270 IKAEITELNHSLELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEFSKKDESSKLNI 329
Query: 65 ARMFVQ--SDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNH 103
S+ E+ + K N ++S DDLN R + L +
Sbjct: 330 LSELESKISEKENELSEILPKYNAIVSEADDLNKRIMLLKN 370
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 4.2
Identities = 24/135 (17%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 7 LELKQAFVDLQVLMIETK-KTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 65
+ L ++D+++ M + + K N+ + T ++++E +P ++
Sbjct: 179 IRLLNQYIDIKITMPQVEGKEDPNVQAVYEMDEAKNEQTIISEQE--GIPGHSEQLLDYN 236
Query: 66 RMFVQSDLEHIKQNLRQKTNTLISRID-DLNNRKVCLNHTLNESESNIRDLIQQKRMKNE 124
+ +Q L + + + L+ D D+ R LN L+ +++ + L +++ + NE
Sbjct: 237 KQSIQLGLRPLSEEVVTTLKNLLEVKDKDVEGRNEALNKILHPAKNLVELLTEKENLINE 296
Query: 125 NQPAAESN-PIPSKK 138
+ + S+ P+P K
Sbjct: 297 STLESPSDPPLPPTK 311
>SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 192
Score = 25.0 bits (52), Expect = 4.2
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 48 QREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNE 107
Q+ +DV PP T + ++ + + L +K N + D N R V + T E
Sbjct: 117 QKILDVHPPQTSSRKAATTWACK-----VHNQLNEKMNQPKTSCDGFNERYVIGSPTYRE 171
Query: 108 SES-NIRDLIQ 117
SE+ N+ + +Q
Sbjct: 172 SEAENVPERVQ 182
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 4.2
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
Query: 3 KTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLP-PGTKTY 61
K V L++ LQ + +E+ + D L + +L +D+L P +
Sbjct: 607 KDVSGYLQEMVTYLQTMYLESLAGLPKHDKSYVYLETLD---HLCTAMVDLLSDPSIRKV 663
Query: 62 ESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRM 121
+ A + D+E+++ Q + I D + C N L ++ D + R
Sbjct: 664 TTAAAEGFKLDVEYLESFAAQVPDQSIVNADSFIELRQCANLLLGDNMEEYLDTDKFMRD 723
Query: 122 KNENQPA 128
N QPA
Sbjct: 724 FNRLQPA 730
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 25.0 bits (52), Expect = 4.2
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 43 HTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTN---TLISRIDDLNNRK- 98
+T+L R +D+ K + + V S LEH+K N ++ + L+ RI L +
Sbjct: 408 NTDLRSR-VDISESKLKKRDDKLKR-VSSQLEHLKHNYEEEKSMNENLLVRIQTLEKQNT 465
Query: 99 ------VCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPI 134
V + +N+ +RDL+ E Q +S +
Sbjct: 466 TKSDQIVSMQFQINDLNEQLRDLMFTISASQEIQKMGQSEEL 507
>SPBC3B9.06c |apg3||autophagy associated protein Apg3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 275
Score = 24.6 bits (51), Expect = 5.6
Identities = 8/33 (24%), Positives = 20/33 (60%)
Query: 105 LNESESNIRDLIQQKRMKNENQPAAESNPIPSK 137
++ S+ D+ +R+K +++ ++S P+P K
Sbjct: 109 ISSIHSDTSDIASAERLKGQSKELSDSGPLPLK 141
>SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 287
Score = 24.6 bits (51), Expect = 5.6
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 80 LRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDL 115
LR T I + ++ + VCL H++ + ES ++
Sbjct: 115 LRHNTERAIKELQEILHAIVCLLHSIMQEESEKEEI 150
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 24.6 bits (51), Expect = 5.6
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 57 GTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNI-RDL 115
G T S V + E L+++ + +RI+ + ++ LN+ ++E S++ + L
Sbjct: 384 GIMTEVSKYASLVNKNYEISSGKLKERQVAVRARIEGIKAHEMFLNNRVSEINSSLEKQL 443
Query: 116 IQQKRMKN 123
QK +++
Sbjct: 444 TTQKELRS 451
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 24.6 bits (51), Expect = 5.6
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 3 KTVDLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVL 54
KT+ ++L A +++L TK+T + + L VLGR + +N + ++ L
Sbjct: 653 KTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAAL 704
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 24.2 bits (50), Expect = 7.4
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 41 QMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVC 100
Q + +++I L + Y + R ++ DLE K+ + + +++++ N K
Sbjct: 541 QSRSEELEQQISKLTDNLQEYRNTVRE-LKLDLEKSKKKNEDLSKLEVEKVEEIANLKKE 599
Query: 101 LNHTLNESE 109
L H + E
Sbjct: 600 LTHLAKQQE 608
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 6 DLELKQAFVDLQVLMIETKKTIENIDHQLAVL 37
DLELK +DL+ I T K + + Q++ L
Sbjct: 1947 DLELKLFDLDLKTYPISTSKDVRMLQKQISDL 1978
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 23.8 bits (49), Expect = 9.8
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 72 DLEHIKQNL-RQKTNTLISRIDDLNNRKVCLNHTLNESESNIRD 114
D E I L RQ+ LI I D N + C+ ++S S D
Sbjct: 434 DFESIFHRLSRQQPTPLIGAIADYGNPESCIGKAAHKSVSCAND 477
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 23.8 bits (49), Expect = 9.8
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 84 TNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
T++++ L N V +++NE+ S I D+I+Q+R
Sbjct: 455 TSSIMGGNPSLFNGSVLSRNSVNETGSAIVDVIKQQR 491
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 23.8 bits (49), Expect = 9.8
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 79 NLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNPIPSKK 138
N + ++L+S I +RK L + E + D ++ Q + E+N + KK
Sbjct: 105 NKLSRVSSLVSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKK 164
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 23.8 bits (49), Expect = 9.8
Identities = 22/90 (24%), Positives = 34/90 (37%)
Query: 10 KQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFV 69
K +FV + V I T+ I +++ T L Q +ID+ P T + +
Sbjct: 612 KLSFVPILVSFIILYNTMVPISLYVSMEIIRVFQTFLVQSDIDLYYPENDTRCEVRSSSI 671
Query: 70 QSDLEHIKQNLRQKTNTLISRIDDLNNRKV 99
+L + KT TL I N V
Sbjct: 672 LEELGQVTHVFSDKTGTLTDNIMLFRNLSV 701
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.128 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,894
Number of Sequences: 5004
Number of extensions: 22383
Number of successful extensions: 140
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 114
Number of HSP's gapped (non-prelim): 40
length of query: 138
length of database: 2,362,478
effective HSP length: 66
effective length of query: 72
effective length of database: 2,032,214
effective search space: 146319408
effective search space used: 146319408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)
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