GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000694-TA|BGIBMGA000694-PA|IPR009053|Prefoldin,
IPR002777|Prefoldin beta-like
         (138 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   0.91 
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   0.91 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   0.91 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.2  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   2.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   3.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   3.7  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   4.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   6.4  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   8.5  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    22   8.5  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 10/40 (25%), Positives = 22/40 (55%)

Query: 81  RQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 120
           RQ+   L+   D + N++  + +++ E +    +L +QKR
Sbjct: 618 RQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKR 657


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 32  HQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQN---LRQKTNTLI 88
           H     G+M+M   L +   DV+  GT  +          D + +K       QK +T+I
Sbjct: 163 HVATHTGQMEMKDVLARYTTDVI--GTCAFGIECNTLRNPDSDFLKYGNKVFEQKVSTMI 220

Query: 89  SRIDDLNNRKVCLNHTLNESESNI 112
             I  L  RK+    TL  +++++
Sbjct: 221 KIILVLMGRKISSKFTLKITDADV 244


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 15/67 (22%), Positives = 30/67 (44%)

Query: 70  QSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAA 129
           + D +  ++  R++     +  + L   +   + TL    + +RDL Q+ +MK + Q   
Sbjct: 74  REDAQRREEEARRREEAAKADNEKLRVEQQETHTTLIAISAQLRDLQQKNQMKRQQQHQP 133

Query: 130 ESNPIPS 136
              P PS
Sbjct: 134 PQQPGPS 140


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 40  MQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQN 79
           ++  T  T+  ++ +PP       + RM +Q  +  +KQ+
Sbjct: 229 LRFSTKPTELILECIPPKPSNLTQLLRMLIQRQIAFLKQH 268


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 97  RKVCLNHTLNESESNIRDLIQQKRMK 122
           R++ + HTL  SE  I+   Q +RMK
Sbjct: 30  RRIEIAHTLVLSERQIKIWFQNRRMK 55


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 65  ARMFVQSDLEHIKQNLR 81
           A++FV  DL H+K  +R
Sbjct: 224 AKLFVPVDLRHVKHEVR 240


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 19/86 (22%), Positives = 35/86 (40%)

Query: 32  HQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRI 91
           H LA   +     ++ Q ++       +  E M +   Q +L  ++  +R   N L   +
Sbjct: 670 HDLARKAKRWDEKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIRGLENRLKYSM 729

Query: 92  DDLNNRKVCLNHTLNESESNIRDLIQ 117
           +DL   K  +N    + E   R+L Q
Sbjct: 730 NDLETSKKNINEYDRQLEDFTRELDQ 755


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 101 LNHTLNESESNIRDLIQQKRMKNENQPAAES 131
           L   LN +E  ++   Q +RMKN+     +S
Sbjct: 303 LARNLNLTERQVKIWFQNRRMKNKKNSQRQS 333


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 9   LKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMARMF 68
           LK    +LQ  ++  K+    ++ Q+A L +  +  + T  E+       K      +  
Sbjct: 820 LKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEK 879

Query: 69  VQSDLEHIKQNLRQKTNTLISRIDDL 94
           + S  + +K    Q+ + L+ + D+L
Sbjct: 880 MNSQSKELKAKYHQR-DKLLKQNDEL 904


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 13/65 (20%), Positives = 26/65 (40%)

Query: 74  EHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNP 133
           + ++Q L QK+    S +      +   N  L    + ++    +   +  +  AAE  P
Sbjct: 76  DRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKFSFDEPVPQKPDNAAAEGAP 135

Query: 134 IPSKK 138
            P +K
Sbjct: 136 KPQRK 140


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 97  RKVCLNHTLNESESNIRDLIQQKRMKNENQPAAESNP 133
           R++ + H L  +E  I+   Q +RMK + +   +  P
Sbjct: 273 RRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEP 309


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.128    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,520
Number of Sequences: 2123
Number of extensions: 3945
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 12
length of query: 138
length of database: 516,269
effective HSP length: 58
effective length of query: 80
effective length of database: 393,135
effective search space: 31450800
effective search space used: 31450800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)