GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000693-TA|BGIBMGA000693-PA|IPR004273|Dynein heavy chain
         (1030 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    28   1.4  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    26   4.4  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    26   4.4  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    26   4.4  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    26   4.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   5.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   7.7  

>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 667 ADKLEAYKEYMDTLPVIEVPE-VFGMHDNANIA 698
           AD ++  K++M  LP  +VP  V G HD   +A
Sbjct: 62  ADYVKVVKDWMSILPAGQVPNWVMGNHDRPRVA 94


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 394 EEKLVFAIAQYVSTSLGHMFIESPTVQLNTLYADTNCAI 432
           EE ++    QY   SLG +F+ +P    N    D N A+
Sbjct: 299 EENVIVVSLQYRVASLGFLFLGTPEAPGNAGLFDQNLAL 337


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 394 EEKLVFAIAQYVSTSLGHMFIESPTVQLNTLYADTNCAI 432
           EE ++    QY   SLG +F+ +P    N    D N A+
Sbjct: 299 EENVIVVSLQYRVASLGFLFLGTPEAPGNAGLFDQNLAL 337


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 394 EEKLVFAIAQYVSTSLGHMFIESPTVQLNTLYADTNCAI 432
           EE ++    QY   SLG +F+ +P    N    D N A+
Sbjct: 185 EENVIVVSLQYRVASLGFLFLGTPEAPGNAGLFDQNLAL 223


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 768 TTVLLHETDRFNALLALIHSSLGELQKAIKGIVVMSEAFEEVFNAFL 814
           T  + HE   + +   +  S + ELQ+A+  +   S +  EVFNA+L
Sbjct: 92  TVPVQHEA--YKSFTEVESSKVNELQQALSSLNAGSGSCAEVFNAYL 136


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 314 PKKPNIESLSDQMWLAVHHLDETNENFRGLVSDCLRRIPITIGSF 358
           PK+   E L +Q       L  T   F GL++D  R+ P  +  F
Sbjct: 472 PKEEIDEELEEQRQRKEAGLSRTARLFGGLINDLKRKAPFYLSDF 516


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 673  YKEYMDTLPVIEVPEVFGMHDNANI--AFENKESNTLIQTIVEVQPR 717
            YK+  D  P+ E P V  +HD A    +FE     +L    +  Q +
Sbjct: 1225 YKDIADLRPMAEQPSVHILHDRAQTTKSFEQSFGQSLTGVALRFQAK 1271


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,076,512
Number of Sequences: 2123
Number of extensions: 45416
Number of successful extensions: 107
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 101
Number of HSP's gapped (non-prelim): 8
length of query: 1030
length of database: 516,269
effective HSP length: 71
effective length of query: 959
effective length of database: 365,536
effective search space: 350549024
effective search space used: 350549024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)