Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000693-TA|BGIBMGA000693-PA|IPR004273|Dynein heavy chain
(1030 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 300 3e-81
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 261 2e-69
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 261 2e-69
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 34 0.45
AF003140-4|AAD47120.1| 814|Caenorhabditis elegans Hypothetical ... 32 2.4
AF003140-3|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 32 2.4
AF003140-2|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 32 2.4
U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical pr... 31 3.2
Z82280-6|CAB05267.2| 460|Caenorhabditis elegans Hypothetical pr... 31 4.2
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 31 4.2
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 30 9.7
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 30 9.7
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 300 bits (737), Expect = 3e-81
Identities = 233/904 (25%), Positives = 438/904 (48%), Gaps = 56/904 (6%)
Query: 11 KLNDPGYVRILENCIRLGWPMLIEDLGETLEATLSPVLLKQTFLQAGRLLIHLGDSDIEY 70
K P + +E IR G ++I+D+ E ++ L P+L K Q R +I G I++
Sbjct: 3198 KAAQPDLMTQIELAIRFGKTIIIDDIVE-FDSALIPILRKDLSSQGPRQVISFGGKSIDF 3256
Query: 71 DTNFRLYMTTKLANPHYLPEICIQVTLVNFTVTLSGLEDQLLADVVRLERPDLEILRTEL 130
+ +F++Y T+ P +Q+ +VNFT T+S L QLL + LE+P+LE + L
Sbjct: 3257 NPDFKIYFCTRDEKVDIRPNSYVQLNIVNFTTTISALSAQLLDVAIHLEKPELEERSSSL 3316
Query: 131 IVRINADKATLLEIEDKILRLLYASSGNILDDEELIETLNESKETSEIINARLEETEATE 190
+ K L +E +L+ L +S GN+L++ L+++LN+SKE++EII + E+E
Sbjct: 3317 LRDAELKKLELEGLEQLLLQQLASSQGNLLENTALLDSLNKSKESAEIITKSIVESEQLH 3376
Query: 191 INISAAREKYRTVATRGAVLYFAVAQLADIDPMYQFSLKYFNQVFSAVIEKSEKCDLLET 250
++ ++ Y ++ + L+F+ + L +PMY +S+ +F I+ E D T
Sbjct: 3377 KELTTQKDIYVPLSLFTSSLFFSFSNLQFHNPMYNYSVNTIMHLFGKTIKSCE--DKSST 3434
Query: 251 RLEILHREITLNVYRNVSRGLFERHKLVFSFLLNMAVYLNDGLVTMDEWNFVLRGPAGTK 310
R+E L R++ L V+ ++SRG+F + +L+F+ A + EW T
Sbjct: 3435 RVETLARQMQLTVFYHISRGIFRQDRLMFAVAFINATM--PKMFQPKEWELF------TG 3486
Query: 311 VVPPKKPNIESLSDQMWLA---VHHLDETNENFRGLVSDCLRRIPITIGSFNVDIHVNNN 367
V+ + ++ +L Q W++ + L + L ++ + T F+ + N
Sbjct: 3487 VLVDESTDLSALRVQ-WISPDRLQSLARIRTHLPSLFNNFQIQDDATWNEFSKTLQCEN- 3544
Query: 368 DKTPPKINWDEKLSSFEKLMILKCLKEEKLVFAIAQYVSTSLGHMFIESPTVQLNTLYAD 427
PK N + K++ F+K++ ++ +K E+L + +V +L I P +L ++ +
Sbjct: 3545 --AFPK-NVELKMTHFQKVLFIQAVKPERLYNCLMDFVLKTLNIPSINPPAFELKHIFQE 3601
Query: 428 TNCAIPLVFVLSTGSDPFGAFQKFATEMGMRDRLHSISLGQGQGPNCHLA-------ASW 480
+ P++F+L+ G+DP +FA+ M + HSIS+GQGQ + A W
Sbjct: 3602 SESTEPILFILADGADPSQELSEFASSMNV--PYHSISMGQGQEIAAYEAIRESASKGEW 3659
Query: 481 ML--SLEVIVANLAS--EH---GTPHSDFRLYLSSMPTAKFPVSVLQNSVKVTNEPPKGL 533
+ +L +++ + S +H TPH +FRL+L++ A+FP +LQ S+K+T EPP G+
Sbjct: 3660 LCLNNLHLMLQAVPSIFKHLSLTTPHENFRLWLTTEGDARFPSMMLQQSLKITFEPPPGV 3719
Query: 534 KANVKRALIEMEEDFFENHVLGQDWRTMLFGICMFHAIIQERKKFGPLGWNITYEFNTSD 593
+ N+ R +++ +N + Q +F + HA++QER+ F P GW YEF SD
Sbjct: 3720 RNNLLRTYTQIDRS-TKNVITCQS----IFVLAWLHALLQERRTFIPQGWTKFYEFGASD 3774
Query: 594 RECAMLNLQMFCADGHIPWDALEYITSQITYGGRVTDMWDQRCLTTILKLFFSAPTLEDG 653
A ++ A+ W+ + I + YGGR+ + +D + L + L + F + +G
Sbjct: 3775 VRVAKSFVEQLTAN-KADWEFVRGILKFVIYGGRIENDFDFKVLDSYLNVLFCDEKI-NG 3832
Query: 654 YVYSQ--SGRYYCPRADKLEAYKEYMDTLPVIEVPEVFGMHDNANIAFENKESNTLIQTI 711
SQ G + E ++P ++ P +FG+ +N +++ E++ I +I
Sbjct: 3833 RAGSQLVKGIDLLATTNVQEYIGHISKSVPSVDEPYLFGLPENIKYSWQIVEADRTISSI 3892
Query: 712 VEVQPRAXXXXXXDTPDQIVWRICDQVRSTVSKKIDKASVNPDLMVPDDMGQLHSLTTVL 771
+ D D+I Q+ S + KK+ ++ P +P + ++ VL
Sbjct: 3893 RTLALGDTKNALSDQSDKI-----SQIVS-LWKKLCQSDDLPKRELPTAIRSADPISEVL 3946
Query: 772 LHETDRFNALLALIHSSLGELQKAIKGIVVMSEAFEEVFNAFLNNRVPAMWHKKGYNSLK 831
ET +L+ +H S+G + K++K + S A ++ + + + P W +
Sbjct: 3947 CLETINALSLIKQLHRSIGHVAKSMKTPSLASPAVQKTIQSLVFQQTPDEWDSM-WAGPS 4005
Query: 832 SLGSWIHDLVLR----IDFMEKWLVDGLQPSSW-VSGLFFPQGLLTGALQSYARRYRVPI 886
+++ +V + + E L S S LF+P L Q+ +R+ ++P+
Sbjct: 4006 DPADYLNVVVKKTRGTLQLFESSKSSSLLSSPIDFSDLFYPNIFLNALRQTTSRQIKIPL 4065
Query: 887 DALV 890
D L+
Sbjct: 4066 DQLI 4069
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 261 bits (640), Expect = 2e-69
Identities = 228/922 (24%), Positives = 410/922 (44%), Gaps = 60/922 (6%)
Query: 7 LQITKLNDPGYVRILENCIRLGWPMLIEDLGETLEATLSPVLLKQTFLQAGRLLIHLGDS 66
+Q T D + + LE+ +R G +L++D+ E + L+PVL ++ GR+LI +GD
Sbjct: 3552 IQKTSFLDESFRKNLESALRFGNSLLVQDV-EAYDPILNPVLNREVKRAGGRVLITIGDQ 3610
Query: 67 DIEYDTNFRLYMTTKLANPHYLPEICIQVTLVNFTVTLSGLEDQLLADVVRLERPDLEIL 126
DI+ +F+++M T+ + + P+IC +VT VNFTVT S L Q L V+R ERPD++
Sbjct: 3611 DIDLSPSFQIFMITRDSTVEFSPDICSRVTFVNFTVTSSSLASQCLNQVLRSERPDVDKK 3670
Query: 127 RTELIVRINADKATLLEIEDKILRLLYASSGNILDDEELIETLNESKETSEIINARLEET 186
R +L+ L +E +L L S G ILDD +IETL + K + + + ET
Sbjct: 3671 RNDLLKLQGEFAVRLRHLEKALLAALNESKGKILDDNSVIETLEKLKNEAAEVAQKSAET 3730
Query: 187 EATEINISAAREKYRTVATRGAVLYFAVAQLADIDPMYQFSLKYFNQVFSAVIEKSEKCD 246
+ + A +Y+ ++T + +Y + QL +I +Y +SL + ++F+ V++ E
Sbjct: 3731 DKVMAEVDAVSAQYQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKTPELSS 3790
Query: 247 LLE--TRLEILHREITLNVYRNVSRGLFERHKLVFSFLLNMAVYLNDGLVTMDEWNFVLR 304
+ RL I+ + V+R VSRG+ K++ + LL ++ E +F L
Sbjct: 3791 TTDYAKRLRIITTSLFQTVFRRVSRGMLHTDKVLLALLLMRIHIRSNPSAPAYEQHFDLL 3850
Query: 305 GPAGTKVVPPKKPNIESLSDQMWLAVHHLDETNENFRGLVSDCLRRIPITIGSFNVDIHV 364
V + + +L V + ++ R +V + S V +
Sbjct: 3851 LGRSDFVAKNDEADSTIPGGLDFLTVEN-KKSIAKARKVVGFENVFAHLQHNSAAVTSWL 3909
Query: 365 -NNNDKTPPKINWDE---KLS----SFEKLMILKCLKEEKLVFAIAQYVSTSLGHMFIES 416
N+N ++ + WD+ KLS + L+++ L+ ++L+ + + VST+ F++
Sbjct: 3910 TNDNPESNVPVVWDDADGKLSPLCIAMNSLIVVHALRPDRLMASAHRVVSTAFDDHFMQQ 3969
Query: 417 PTVQ--LNTLYADTNCAIPLVFVLSTGSDPFGAFQKFATEMGMRDRLHSISLGQGQG--- 471
V L+ + + + + P++ +TG D G + A E +L SI++G +G
Sbjct: 3970 DKVVDILSIVDNEVSPSEPVLLCSATGYDASGKIEDLAVETNR--QLTSIAIGSAEGFNQ 4027
Query: 472 -----------------PNCHLAASWMLSLEVIVANLASEHGTPHSDFRLYLSSMPTAKF 514
N HLA SW+ LE + ++ PH+ FRL+L++ K
Sbjct: 4028 ADSALGTATKSGRWVLLKNVHLAPSWLAQLEKRLHSM-----KPHAQFRLFLTAEIHPKL 4082
Query: 515 PVSVLQNSVKVTNEPPKGLKANVKRALIEMEEDFFENHVLGQDWRTMLFGICMFHAIIQE 574
P S+L+ S V EP GLKAN+ R+L + + +L +C HA++QE
Sbjct: 4083 PSSILRASRVVVFEPATGLKANLLRSLSSIPPQRLTKAPTERSRLYLL--VCWLHALVQE 4140
Query: 575 RKKFGPLGWNITYEFNTSDRECAMLNLQM---FCADG-------HIPWDALEYITSQITY 624
R ++ PLGW+ YEF+ +D A L A G +PW L + SQ Y
Sbjct: 4141 RLRYTPLGWSTAYEFSDADLRVACDTLDAAVDAVAQGRPNVEPERLPWTTLRTLLSQCIY 4200
Query: 625 GGRVTDMWDQRCLTTILKLFFSAPTLEDGYV----YSQSGRYYCPRADKLEAYKEYMDTL 680
GG++ + +DQ L +L+ F+A + E +V Y + P K + +++ L
Sbjct: 4201 GGKIDNQFDQVLLDCVLENLFTAKSFEQDHVLIPKYDGDDSLFTPNMSKKDQMIGWVEEL 4260
Query: 681 PVIEVPEVFGMHDNANIAFENKESNTLIQTIVEVQPRAXXXXXXDTPDQIVWRICDQVRS 740
++P G+ +NA K ++++ +++V D +++ + Q+
Sbjct: 4261 KNEQLPAWLGLPNNAEKVLLTKRGESMLRNMLKVTDE-ELAFNEDGKEEVKPQWMAQLGE 4319
Query: 741 TVSKKIDKASVNPDLMVPDDMGQLHSLTTVLLHETDRFNALLALIHSSLGELQKAIKGIV 800
+ + M L E + + LL I L E+ +
Sbjct: 4320 LAKQWLQLLPKEIVKMRRTVENIKDPLFRFFEREVNLGSQLLKDIRRDLNEISAVCRAEK 4379
Query: 801 VMSEAFEEVFNAFLNNRVPAMWHKKGYNSLKSLGSWIHDLVLRI-DFMEKWLVDGLQPSS 859
+ + + VP W + ++ W+ DL R+ + D L+ +
Sbjct: 4380 KQNNETRALAASLQKGEVPTGWKRYTVPREVTVMDWMTDLNERLKQLIRIGGADNLKRET 4439
Query: 860 -WVSGLFFPQGLLTGALQSYAR 880
W+ G F P+ +T Q A+
Sbjct: 4440 FWLGGTFSPEAYITATRQQVAQ 4461
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 261 bits (640), Expect = 2e-69
Identities = 228/922 (24%), Positives = 410/922 (44%), Gaps = 60/922 (6%)
Query: 7 LQITKLNDPGYVRILENCIRLGWPMLIEDLGETLEATLSPVLLKQTFLQAGRLLIHLGDS 66
+Q T D + + LE+ +R G +L++D+ E + L+PVL ++ GR+LI +GD
Sbjct: 3552 IQKTSFLDESFRKNLESALRFGNSLLVQDV-EAYDPILNPVLNREVKRAGGRVLITIGDQ 3610
Query: 67 DIEYDTNFRLYMTTKLANPHYLPEICIQVTLVNFTVTLSGLEDQLLADVVRLERPDLEIL 126
DI+ +F+++M T+ + + P+IC +VT VNFTVT S L Q L V+R ERPD++
Sbjct: 3611 DIDLSPSFQIFMITRDSTVEFSPDICSRVTFVNFTVTSSSLASQCLNQVLRSERPDVDKK 3670
Query: 127 RTELIVRINADKATLLEIEDKILRLLYASSGNILDDEELIETLNESKETSEIINARLEET 186
R +L+ L +E +L L S G ILDD +IETL + K + + + ET
Sbjct: 3671 RNDLLKLQGEFAVRLRHLEKALLAALNESKGKILDDNSVIETLEKLKNEAAEVAQKSAET 3730
Query: 187 EATEINISAAREKYRTVATRGAVLYFAVAQLADIDPMYQFSLKYFNQVFSAVIEKSEKCD 246
+ + A +Y+ ++T + +Y + QL +I +Y +SL + ++F+ V++ E
Sbjct: 3731 DKVMAEVDAVSAQYQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKTPELSS 3790
Query: 247 LLE--TRLEILHREITLNVYRNVSRGLFERHKLVFSFLLNMAVYLNDGLVTMDEWNFVLR 304
+ RL I+ + V+R VSRG+ K++ + LL ++ E +F L
Sbjct: 3791 TTDYAKRLRIITTSLFQTVFRRVSRGMLHTDKVLLALLLMRIHIRSNPSAPAYEQHFDLL 3850
Query: 305 GPAGTKVVPPKKPNIESLSDQMWLAVHHLDETNENFRGLVSDCLRRIPITIGSFNVDIHV 364
V + + +L V + ++ R +V + S V +
Sbjct: 3851 LGRSDFVAKNDEADSTIPGGLDFLTVEN-KKSIAKARKVVGFENVFAHLQHNSAAVTSWL 3909
Query: 365 -NNNDKTPPKINWDE---KLS----SFEKLMILKCLKEEKLVFAIAQYVSTSLGHMFIES 416
N+N ++ + WD+ KLS + L+++ L+ ++L+ + + VST+ F++
Sbjct: 3910 TNDNPESNVPVVWDDADGKLSPLCIAMNSLIVVHALRPDRLMASAHRVVSTAFDDHFMQQ 3969
Query: 417 PTVQ--LNTLYADTNCAIPLVFVLSTGSDPFGAFQKFATEMGMRDRLHSISLGQGQG--- 471
V L+ + + + + P++ +TG D G + A E +L SI++G +G
Sbjct: 3970 DKVVDILSIVDNEVSPSEPVLLCSATGYDASGKIEDLAVETNR--QLTSIAIGSAEGFNQ 4027
Query: 472 -----------------PNCHLAASWMLSLEVIVANLASEHGTPHSDFRLYLSSMPTAKF 514
N HLA SW+ LE + ++ PH+ FRL+L++ K
Sbjct: 4028 ADSALGTATKSGRWVLLKNVHLAPSWLAQLEKRLHSM-----KPHAQFRLFLTAEIHPKL 4082
Query: 515 PVSVLQNSVKVTNEPPKGLKANVKRALIEMEEDFFENHVLGQDWRTMLFGICMFHAIIQE 574
P S+L+ S V EP GLKAN+ R+L + + +L +C HA++QE
Sbjct: 4083 PSSILRASRVVVFEPATGLKANLLRSLSSIPPQRLTKAPTERSRLYLL--VCWLHALVQE 4140
Query: 575 RKKFGPLGWNITYEFNTSDRECAMLNLQM---FCADG-------HIPWDALEYITSQITY 624
R ++ PLGW+ YEF+ +D A L A G +PW L + SQ Y
Sbjct: 4141 RLRYTPLGWSTAYEFSDADLRVACDTLDAAVDAVAQGRPNVEPERLPWTTLRTLLSQCIY 4200
Query: 625 GGRVTDMWDQRCLTTILKLFFSAPTLEDGYV----YSQSGRYYCPRADKLEAYKEYMDTL 680
GG++ + +DQ L +L+ F+A + E +V Y + P K + +++ L
Sbjct: 4201 GGKIDNQFDQVLLDCVLENLFTAKSFEQDHVLIPKYDGDDSLFTPNMSKKDQMIGWVEEL 4260
Query: 681 PVIEVPEVFGMHDNANIAFENKESNTLIQTIVEVQPRAXXXXXXDTPDQIVWRICDQVRS 740
++P G+ +NA K ++++ +++V D +++ + Q+
Sbjct: 4261 KNEQLPAWLGLPNNAEKVLLTKRGESMLRNMLKVTDE-ELAFNEDGKEEVKPQWMAQLGE 4319
Query: 741 TVSKKIDKASVNPDLMVPDDMGQLHSLTTVLLHETDRFNALLALIHSSLGELQKAIKGIV 800
+ + M L E + + LL I L E+ +
Sbjct: 4320 LAKQWLQLLPKEIVKMRRTVENIKDPLFRFFEREVNLGSQLLKDIRRDLNEISAVCRAEK 4379
Query: 801 VMSEAFEEVFNAFLNNRVPAMWHKKGYNSLKSLGSWIHDLVLRI-DFMEKWLVDGLQPSS 859
+ + + VP W + ++ W+ DL R+ + D L+ +
Sbjct: 4380 KQNNETRALAASLQKGEVPTGWKRYTVPREVTVMDWMTDLNERLKQLIRIGGADNLKRET 4439
Query: 860 -WVSGLFFPQGLLTGALQSYAR 880
W+ G F P+ +T Q A+
Sbjct: 4440 FWLGGTFSPEAYITATRQQVAQ 4461
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 34.3 bits (75), Expect = 0.45
Identities = 28/143 (19%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 116 VRLERPDLEILRTELIVRINADKATLLEIEDKILRLLYASSGNILD-DEELIETLNESKE 174
V+ E +I+ E++ +NA LE +++ + L S + +EELI +++ ++
Sbjct: 897 VKEELIGAKIMNKEMVDELNAKLGDALEGMEELKKSLEVSEAKVQRREEELIAQVSKHRD 956
Query: 175 TSEIINARLEETEATEINISAAREKYRTVATR----GAVLYFAVAQLADIDPMYQFSLKY 230
E + L+E ++ + + +R + +A R A + FA L D++ +
Sbjct: 957 QQEQLQLTLDELKSAQHSTETSRSQSNELAARIEELEASISFAQKALQDVEDVKHQQDIQ 1016
Query: 231 FNQVFSAVIEKSEKCDLLETRLE 253
++ A+++ + + T L+
Sbjct: 1017 ISEANEAMVKLKQDFETERTSLQ 1039
>AF003140-4|AAD47120.1| 814|Caenorhabditis elegans Hypothetical
protein C44E4.1b protein.
Length = 814
Score = 31.9 bits (69), Expect = 2.4
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 116 VRLERPDLEILRTELIVRINADKATLLEIEDKILRLLY----ASSGNILDD--EELIETL 169
V L RP L+++ T L +A+ EI L+L++ +S N + E +IE L
Sbjct: 396 VFLARPSLKLILTLLAGLARGHQASQKEIAKTTLKLMHRLEQVASDNSIGTLAENVIEAL 455
Query: 170 NESKETSEIINARLEETEATEINISAA-REKYRT 202
NE +E I +ETE + ++ REK T
Sbjct: 456 NEDEEVRNQIKLVRDETEKKKKQMAMLNREKQLT 489
>AF003140-3|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 31.9 bits (69), Expect = 2.4
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 116 VRLERPDLEILRTELIVRINADKATLLEIEDKILRLLY----ASSGNILDD--EELIETL 169
V L RP L+++ T L +A+ EI L+L++ +S N + E +IE L
Sbjct: 2294 VFLARPSLKLILTLLAGLARGHQASQKEIAKTTLKLMHRLEQVASDNSIGTLAENVIEAL 2353
Query: 170 NESKETSEIINARLEETEATEINISAA-REKYRT 202
NE +E I +ETE + ++ REK T
Sbjct: 2354 NEDEEVRNQIKLVRDETEKKKKQMAMLNREKQLT 2387
>AF003140-2|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 31.9 bits (69), Expect = 2.4
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 116 VRLERPDLEILRTELIVRINADKATLLEIEDKILRLLY----ASSGNILDD--EELIETL 169
V L RP L+++ T L +A+ EI L+L++ +S N + E +IE L
Sbjct: 2292 VFLARPSLKLILTLLAGLARGHQASQKEIAKTTLKLMHRLEQVASDNSIGTLAENVIEAL 2351
Query: 170 NESKETSEIINARLEETEATEINISAA-REKYRT 202
NE +E I +ETE + ++ REK T
Sbjct: 2352 NEDEEVRNQIKLVRDETEKKKKQMAMLNREKQLT 2385
>U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical
protein B0432.6 protein.
Length = 329
Score = 31.5 bits (68), Expect = 3.2
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 134 INADKATLLEIEDKILRLLYASSGNILDDEELIETLNESKETSEIINARLEETEATE--I 191
I DK + + D +LR + G L D + E L + +++ L+ + +
Sbjct: 42 IYIDKESSQKALDDLLRKVTLDGGISLKDAKSSEILAAYERKIQMLQLELQMKNVPKPVV 101
Query: 192 NISAAREKYRTVATRGAVLYFAVAQLADIDPMYQFSLKYFNQVFSAVIEKSEKCDLLETR 251
I +K R +A L + QL D M + +L+ NQ+ + E +KCD +ET
Sbjct: 102 EIETTSQKIRDLAQECEALRDSNKQLTD--HMTRGNLE-INQLKVQLEEVKQKCDSIETS 158
Query: 252 L 252
L
Sbjct: 159 L 159
>Z82280-6|CAB05267.2| 460|Caenorhabditis elegans Hypothetical
protein R05A10.6 protein.
Length = 460
Score = 31.1 bits (67), Expect = 4.2
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 327 WLAVHHLDETNENFRGLVSDCLRRI-PITIGSFNV-DIHVNNNDKTPPKINWDEKLSSFE 384
W AV LDE F + D LR I +IG +V +HV ND P K E + E
Sbjct: 265 WTAVIDLDERMTTFGQRMIDLLRSIQDPSIGVLDVPHVHVIQNDDFPAKF---ENRTQLE 321
Query: 385 KLMILK 390
K +I K
Sbjct: 322 KELIFK 327
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 31.1 bits (67), Expect = 4.2
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 115 VVRLERPDLEILRTELIVRINADKATLLEIEDKILRLLYASSG--NILDDEELIETLNES 172
++ L R DL+ L E NA + ++ EI K+ L A S N++ E+ + +
Sbjct: 112 LLELRRDDLKKLWHE-----NAQQKSVCEIMAKLEELREAPSKIENLISKEQYQQAADTV 166
Query: 173 KETSEIINARLEETEATEINISAAREKYRTV 203
E+ E+IN RL E ++SA E++ +
Sbjct: 167 TESRELINGRLSRVEGLS-HLSAEIERFTKI 196
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 120 RPDLEILRTELI---VRINADKATLLEIEDKILRLLYASSGNILDDEELIETLNESKETS 176
R D LR++L + DK T EIE +I ++ ++ +++E+L +L++ KE +
Sbjct: 222 REDCVTLRSQLFQFEASRSQDKTT--EIEKEIEKITAETAKVRVENEQLKASLSKIKEDT 279
Query: 177 EIINARLEETEATEI-NISAAREKYRTVATRGAVLYFAVAQLADIDPMYQFSLKYFNQVF 235
+I+ + E + +I N E+ R++ +L +A+ + + K +
Sbjct: 280 KILKLKYEARQQEDIENKKLIEERKRSII---ELLRRKIAEKKKSNTVKGSDRKKITSLK 336
Query: 236 SAVIEKSEKCDLLETRLEILHREIT 260
A+ ++ EK + + LE L T
Sbjct: 337 KAIAKEQEKLEKGKKELEQLQSSKT 361
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 29.9 bits (64), Expect = 9.7
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 120 RPDLEILRTELI---VRINADKATLLEIEDKILRLLYASSGNILDDEELIETLNESKETS 176
R D LR++L + DK T EIE +I ++ ++ +++E+L +L++ KE +
Sbjct: 222 REDCVTLRSQLFQFEASRSQDKTT--EIEKEIEKITAETAKVRVENEQLKASLSKIKEDT 279
Query: 177 EIINARLEETEATEI-NISAAREKYRTVATRGAVLYFAVAQLADIDPMYQFSLKYFNQVF 235
+I+ + E + +I N E+ R++ +L +A+ + + K +
Sbjct: 280 KILKLKYEARQQEDIENKKLIEERKRSII---ELLRRKIAEKKKSNTVKGSDRKKITSLK 336
Query: 236 SAVIEKSEKCDLLETRLEILHREIT 260
A+ ++ EK + + LE L T
Sbjct: 337 KAIAKEQEKLEKGKKELEQLQSSKT 361
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,022,574
Number of Sequences: 27539
Number of extensions: 1161589
Number of successful extensions: 2645
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2612
Number of HSP's gapped (non-prelim): 28
length of query: 1030
length of database: 12,573,161
effective HSP length: 89
effective length of query: 941
effective length of database: 10,122,190
effective search space: 9524980790
effective search space used: 9524980790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -