Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000692-TA|BGIBMGA000692-PA|IPR001367|Iron dependent
repressor, IPR003593|AAA ATPase, IPR013602|Dynein heavy chain,
N-terminal region 2, IPR011704|ATPase associated with various cellular
activities, AAA-5
(2768 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g23460.1 68415.m02801 extra-large guanine nucleotide binding ... 36 0.29
At3g05675.2 68416.m00633 expressed protein 34 1.2
At3g05675.1 68416.m00632 expressed protein 34 1.2
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 34 1.6
At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05... 33 2.1
At1g67230.1 68414.m07652 expressed protein 33 2.7
At4g32260.1 68417.m04590 ATP synthase family contains Pfam profi... 33 3.6
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 33 3.6
At1g20530.1 68414.m02558 hypothetical protein 33 3.6
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 32 4.8
At4g14410.2 68417.m02224 basic helix-loop-helix (bHLH) family pr... 32 4.8
At4g14410.1 68417.m02223 basic helix-loop-helix (bHLH) family pr... 32 4.8
At3g30230.1 68416.m03820 myosin heavy chain-related similar to M... 32 4.8
At3g23210.1 68416.m02926 basic helix-loop-helix (bHLH) family pr... 32 4.8
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 32 4.8
At5g19670.1 68418.m02340 exostosin family protein contains Pfam ... 32 6.3
At3g58370.1 68416.m06506 K-Cl Co-transporter type 1 protein-rela... 32 6.3
At3g22790.1 68416.m02873 kinase interacting family protein simil... 32 6.3
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 32 6.3
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 32 6.3
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 31 8.4
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 31 8.4
>At2g23460.1 68415.m02801 extra-large guanine nucleotide binding
protein / G-protein (XLG) identical to extra-large
G-protein (XLG) [Arabidopsis thaliana] GI:3201680
Length = 888
Score = 36.3 bits (80), Expect = 0.29
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 1319 LFRPISMMVPDYALIAEVILYSEGFESSKGLAKKMVQMYKLSSEQ-LSKQDHYDFGMR 1375
L R I ++ PDY ILY+EG SS GLA + +SE+ L DH+D +R
Sbjct: 644 LERAIDVLTPDYEPSDLDILYAEGVTSSSGLACLDFSFPQTASEENLDPSDHHDSLLR 701
>At3g05675.2 68416.m00633 expressed protein
Length = 441
Score = 34.3 bits (75), Expect = 1.2
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 832 NETRLFSIVDKSWKDIMRKLAKVPLAMPAATQPKLYEEFVRNNEMLDQIMKCLEAYLETK 891
N+T + I + W+ + + LA+P+A Q ++ E++ N + + + E +
Sbjct: 363 NDTVRYKIDGEIWQALESSFVSIILALPSADQAEILTEWLSKNGLYPDLTEAFEVWCYRS 422
Query: 892 RVAFPRFFFLSNDE 905
+VA R + +E
Sbjct: 423 KVAKRRLGLVGGEE 436
>At3g05675.1 68416.m00632 expressed protein
Length = 441
Score = 34.3 bits (75), Expect = 1.2
Identities = 16/74 (21%), Positives = 35/74 (47%)
Query: 832 NETRLFSIVDKSWKDIMRKLAKVPLAMPAATQPKLYEEFVRNNEMLDQIMKCLEAYLETK 891
N+T + I + W+ + + LA+P+A Q ++ E++ N + + + E +
Sbjct: 363 NDTVRYKIDGEIWQALESSFVSIILALPSADQAEILTEWLSKNGLYPDLTEAFEVWCYRS 422
Query: 892 RVAFPRFFFLSNDE 905
+VA R + +E
Sbjct: 423 KVAKRRLGLVGGEE 436
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 33.9 bits (74), Expect = 1.6
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 157 IKLFDYMTNYMLYRLTKRSNYMLADMLRIHVNFTPSRELLEGSALDEVLEVLPRQTDTCK 216
+KL+D T ++ L +NY VNF P ++ + DE + + T C
Sbjct: 95 LKLWDVETGSLIKTLIGHTNYAFC------VNFNPQSNMIVSGSFDETVRIWDVTTGKC- 147
Query: 217 WALFQVDAYVRPNGAVELN-PSQEIISSYLEKITSYWD 253
L + A+ P AV+ N I+SS + + WD
Sbjct: 148 --LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
>At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05794:
T-complex protein 11
Length = 1097
Score = 33.5 bits (73), Expect = 2.1
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2637 KEAAAILKSVMAVLRAK---QKEVEAIEAQLAKMMDE--LKTVEDERLKLQADVDLAAAR 2691
KE A + K A AK ++ VE +L ++E LK ++ L +A AA+
Sbjct: 108 KELARLAKMDEARQAAKNGLEQRVEKERDELESKVEERVLKAEKNRMLLFKAMAQRRAAK 167
Query: 2692 LSRAGKLTQALADEKTRWEESVKAATQQ 2719
RA + A ++TR++ESV+AA Q
Sbjct: 168 RQRAAQSLMKKAIQETRYKESVRAAIYQ 195
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 33.1 bits (72), Expect = 2.7
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 2622 YAKVFRVVEPKILKHKEAAAILKSVMAVLRAK----QKEVEAIEAQLAKMMDELKTVEDE 2677
Y ++ ++ +I K + +L+ L+A+ +KE E ++ + AK+ +ELK + D+
Sbjct: 486 YLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELDERKAKIGNELKNITDQ 545
Query: 2678 RLKLQADVDLAAARLSRAGKLTQALADEKTRWEESVKAA 2716
+ KL+ + L RL + + + + E KA+
Sbjct: 546 KEKLERHIHLEEERLKKEKQAANENMERELETLEVAKAS 584
Score = 32.3 bits (70), Expect = 4.8
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 2617 QAIDMYAKVFRVVEPKILKHKEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVED 2676
+A+ K + K+L+ KE I+ ++ A++ E +A +++ K DEL+ E+
Sbjct: 425 KALKSEEKALETEKKKLLEDKE---IILNLKALVEKVSGENQAQLSEINKEKDELRVTEE 481
Query: 2677 ER---LKLQADVDLAAARLSRAGKLTQALADEKTRWEESVKAATQQL 2720
ER L+LQ ++ + +L Q A++ ES + ++L
Sbjct: 482 ERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEEL 528
>At4g32260.1 68417.m04590 ATP synthase family contains Pfam profile:
PF00430 ATP synthase B/B' CF(0); identical to cDNA
chloroplast ATP synthase beta chain precursor (atpG)
GI:5730140
Length = 219
Score = 32.7 bits (71), Expect = 3.6
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 2622 YAKVFRVVEPKILKHKEAAAILKSVMAVLRAKQKEVEAI-EAQLAKMMDELKTVEDERLK 2680
Y+ + ++ + KE A +K ++ ++ A+ A A++ L ++ E +
Sbjct: 107 YSPLGNFMDQRDASIKEKLASVKDTSTEVKELDEQAAAVMRAARAEIAAALNKMKKET-Q 165
Query: 2681 LQADVDLAAARLSRAGKLTQALADEKTRWEESVKAATQQLHCTTGDII 2728
++ + LA R +L +ALA +++ EE++KA Q+ + DI+
Sbjct: 166 VEVEEKLAEGRKKVEEELKEALASLESQKEETIKALDSQIAALSEDIV 213
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q27974
Auxilin {Bos taurus}; contains Pfam profile PF00226:
DnaJ domain
Length = 1448
Score = 32.7 bits (71), Expect = 3.6
Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 540 DEKSDLEKVMETLDDLLEKLMACSARDKQIREWQKIFKIPPARLEQLDEAINDVKLRQLL 599
D K+ + +V ET L K + + + + ++ P ++++ EA++ V R+ +
Sbjct: 644 DSKTYVREVEETPTPSLNKTQSDDSVGAMV-SFNRVNISEPGNIDEVQEAVHKVPRRRRV 702
Query: 600 WKASKEWNDMFKSWYDN--PFNTLDVDEIQNTTISY 633
WK S++ +M K+ N P+ L+ E + T +S+
Sbjct: 703 WKTSEDVYNMIKAPKGNNRPWQ-LESAENETTAMSF 737
>At1g20530.1 68414.m02558 hypothetical protein
Length = 614
Score = 32.7 bits (71), Expect = 3.6
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 519 IMNLMLDVNKLRDEVTQPWLYDEKSDLEKVMETLDDLLEKLMACSAR-DKQIREWQKIFK 577
I N+ L +NKLRDE + W +++++ L ++ ++ C +R K I E +K+ K
Sbjct: 377 INNICLTINKLRDE--ELWF-----QMKELIHRLSEMWNSMLECHSRQSKVIAEAKKLDK 429
Query: 578 IPPARLEQLDEAINDVKLRQLLWKASKEWNDMFKSWYD 615
+ E LD ++ ++L L + W+ +W D
Sbjct: 430 M--TIKENLD--LSQLELAMELKLELRNWSLSMSNWID 463
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 32.3 bits (70), Expect = 4.8
Identities = 13/74 (17%), Positives = 41/74 (55%)
Query: 2632 KILKHKEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAAR 2691
K+ H+ + + ++ ++ E+E + Q +++ +EL+T ++E +++ +++A++
Sbjct: 919 KVKVHESILEEINGLSEKIKGRELELETLGKQRSELDEELRTKKEENVQMHDKINVASSE 978
Query: 2692 LSRAGKLTQALADE 2705
+ +L L +E
Sbjct: 979 IMALTELINNLKNE 992
>At4g14410.2 68417.m02224 basic helix-loop-helix (bHLH) family protein
Length = 277
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/79 (21%), Positives = 40/79 (50%)
Query: 2606 SKVCRSMVLWVQAIDMYAKVFRVVEPKILKHKEAAAILKSVMAVLRAKQKEVEAIEAQLA 2665
+K CR + + + + + V+EP + AIL + +L + E +E
Sbjct: 128 TKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQ 187
Query: 2666 KMMDELKTVEDERLKLQAD 2684
K+++E+K+++ E+ +L+ +
Sbjct: 188 KLLEEIKSLKAEKNELREE 206
>At4g14410.1 68417.m02223 basic helix-loop-helix (bHLH) family protein
Length = 283
Score = 32.3 bits (70), Expect = 4.8
Identities = 17/79 (21%), Positives = 40/79 (50%)
Query: 2606 SKVCRSMVLWVQAIDMYAKVFRVVEPKILKHKEAAAILKSVMAVLRAKQKEVEAIEAQLA 2665
+K CR + + + + + V+EP + AIL + +L + E +E
Sbjct: 134 TKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQ 193
Query: 2666 KMMDELKTVEDERLKLQAD 2684
K+++E+K+++ E+ +L+ +
Sbjct: 194 KLLEEIKSLKAEKNELREE 212
>At3g30230.1 68416.m03820 myosin heavy chain-related similar to Myosin
heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 527
Score = 32.3 bits (70), Expect = 4.8
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 2635 KHKEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLSR 2694
K A L+S+ + + +V+ +L K EL+ KLQ ++ +A RLS
Sbjct: 302 KFSSLEADLRSLSDSKQKLEDQVDLFSTELKKSNAELQDQYRRHDKLQDELSVARGRLSE 361
Query: 2695 AGKLTQALADEKTRWEESVKAATQ 2718
+ L ++ T+ E KA T+
Sbjct: 362 SKSAAYTLNNQFTKLEAKYKAITK 385
>At3g23210.1 68416.m02926 basic helix-loop-helix (bHLH) family protein
similar to hypothetical protein GB:CAB10220 from
[Arabidopsis thaliana]
Length = 320
Score = 32.3 bits (70), Expect = 4.8
Identities = 16/79 (20%), Positives = 41/79 (51%)
Query: 2606 SKVCRSMVLWVQAIDMYAKVFRVVEPKILKHKEAAAILKSVMAVLRAKQKEVEAIEAQLA 2665
+K CR + + D + + V+EP + +AIL + V+ + E ++
Sbjct: 166 TKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQ 225
Query: 2666 KMMDELKTVEDERLKLQAD 2684
K+++E+K+++ ++ +L+ +
Sbjct: 226 KLLEEIKSLKADKNELREE 244
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 32.3 bits (70), Expect = 4.8
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 480 MTQFLGLSVTLSTLRSDVDARIESRSKLAGMFASQIGKDIMNLMLDVNKLRDEVTQPWLY 539
+T+ + L TL + DA ++ + A + ++ M +V K +E+T L
Sbjct: 298 ITELSSVKEELETLHKEYDALVQDKD-----VAVKKVEEAMLASKEVEKTVEELTIE-LI 351
Query: 540 DEKSDLEKVMET-LDDLLEKLMACSARDKQIREWQKIFKIPPARLEQLDEAINDVK 594
K LE + L+ +++ A ARD+ W+K K L++L++ I+ K
Sbjct: 352 ATKESLESAHASHLEAEEQRIGAAMARDQDTHRWEKELKQAEEELQRLNQQIHSSK 407
>At5g19670.1 68418.m02340 exostosin family protein contains Pfam
domain, PF03016: Exostosin family
Length = 600
Score = 31.9 bits (69), Expect = 6.3
Identities = 28/149 (18%), Positives = 60/149 (40%), Gaps = 4/149 (2%)
Query: 795 KNLELFAKTLEEWYACQQTWMYLE---VIFSAPDIQRQLPNETRLFSIVDKSWKDIMRKL 851
+N+ LF ++ E + ++Y E IF P ++ +E +++ + + ++
Sbjct: 255 RNVSLFKRSYELMERILKVYVYKEGNRPIFHTPILKGLYASEGWFMKLMEGNKQYTVKDP 314
Query: 852 AKVPLA-MPAATQPKLYEEFVRNNEMLDQIMKCLEAYLETKRVAFPRFFFLSNDELLEIL 910
K L MP + + Y +VRN+ + + L+ Y E +P F + +
Sbjct: 315 RKAHLYYMPFSARMLEYTLYVRNSHNRTNLRQFLKEYTEHISSKYPFFNRTDGADHFLVA 374
Query: 911 AQTRNPHAVQPHLRKCFDAIAKLEFGVKF 939
P+ + H+ C A+ + F
Sbjct: 375 CHDWAPYETRHHMEHCIKALCNADVTAGF 403
>At3g58370.1 68416.m06506 K-Cl Co-transporter type 1 protein-related /
KCC1 protein-related contains weak hit to Pfam profile
PF03522: K-Cl Co-transporter type 1 (KCC1)
Length = 219
Score = 31.9 bits (69), Expect = 6.3
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 2643 LKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLSRA 2695
L+ +A ++AK+K+VE +A+L + +EL+ + + L+L+A ++ A +S A
Sbjct: 157 LEKKLAEVKAKKKKVETGKARLQRAEEELQKLNQKCLELKAFLEKENADVSEA 209
>At3g22790.1 68416.m02873 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 31.9 bits (69), Expect = 6.3
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 2650 LRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLSRAGKLTQALADEKTRW 2709
L QK+V ++ + +K E K + + KL+A+ D A R + + + L + +
Sbjct: 197 LEVAQKDVSGLDERASKAEIETKILAEALAKLEAERDAALLRYNESMQKITELEESFSHA 256
Query: 2710 EESVKAATQQ 2719
+E VK T +
Sbjct: 257 QEDVKGLTNR 266
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 31.9 bits (69), Expect = 6.3
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 1477 VMLVGPTGGGKTVVLHVLGDTYTRLYENGVEGSQYQPVRKYIMN-PKSLTIGE-LYGEVN 1534
V L G G T L LGD + YE G ++++ V K +N P L I E YG
Sbjct: 109 VELAGTNGETTTQGLDGLGDRCKKYYEAGARFAKWRAVLKIGVNEPSQLAIHENAYGLAR 168
Query: 1535 LQTLEWHDGILPL 1547
+ +G++P+
Sbjct: 169 YAVICQENGLVPI 181
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 31.9 bits (69), Expect = 6.3
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 25/137 (18%)
Query: 1468 HETMIVRWGVMLVGPTGGGKTVVLHVLGDTYTRLYENGVEGSQYQPVRKYIMNPKSLTIG 1527
H I R+ V+L GPT GKT ++ L + G+++ + + +G
Sbjct: 1066 HAIFIKRYPVLLQGPTSSGKTSLVKYLA---------AISGNKFVRINNHEQTDIQEYLG 1116
Query: 1528 ELYGEVNLQTLEWHDGILPLCLRTAVQCLNPDHQWLICD----GPVDAVWIENMNTVLDD 1583
Y + L +H+G L V+ + H W++ D P D +E +N +LDD
Sbjct: 1117 S-YMTDSSGKLVFHEGAL-------VKAVRGGH-WIVLDELNLAPSDV--LEALNRLLDD 1165
Query: 1584 NKMLCLSN-SERIKLTP 1599
N+ L + SE I P
Sbjct: 1166 NRELFVPELSETISAHP 1182
Score = 31.5 bits (68), Expect = 8.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 1451 ERKLQIEICQIRKVIQLHETMIVRWGVMLVGPTGGGKTVVLHVLGD 1496
E+ + E+ + + L + + V+LVG TGGGKT + +L D
Sbjct: 1305 EKVVVQEVLERHFRVSLAKDDLYNMPVLLVGDTGGGKTTICQILSD 1350
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 1477 VMLVGPTGGGKTVVLHVLGDTYTRLYENGVEGSQYQPVRKYIMN-PKSLTIGE-LYGEVN 1534
V L G G T L LGD + YE G ++++ V K N P L I E YG
Sbjct: 109 VELAGTNGETTTTGLDGLGDRCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLAR 168
Query: 1535 LQTLEWHDGILPL 1547
+ +G++P+
Sbjct: 169 YAVICQENGLVPI 181
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 31.5 bits (68), Expect = 8.4
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 1477 VMLVGPTGGGKTVVLHVLGDTYTRLYENGVEGSQYQPVRKYIMN-PKSLTIGE-LYGEVN 1534
V L G G T L LGD + YE G ++++ V K N P L I E YG
Sbjct: 143 VELAGTNGETTTTGLDGLGDRCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLAR 202
Query: 1535 LQTLEWHDGILPL 1547
+ +G++P+
Sbjct: 203 YAVICQENGLVPI 215
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.138 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,134,124
Number of Sequences: 28952
Number of extensions: 2617242
Number of successful extensions: 7283
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7237
Number of HSP's gapped (non-prelim): 57
length of query: 2768
length of database: 12,070,560
effective HSP length: 94
effective length of query: 2674
effective length of database: 9,349,072
effective search space: 24999418528
effective search space used: 24999418528
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 68 (31.5 bits)
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