Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000692-TA|BGIBMGA000692-PA|IPR001367|Iron dependent
repressor, IPR003593|AAA ATPase, IPR013602|Dynein heavy chain,
N-terminal region 2, IPR011704|ATPase associated with various cellular
activities, AAA-5
(2768 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 38 0.12
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 36 0.62
03_01_0069 + 549787-549791,550033-550303,550405-552201 35 0.81
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 35 0.81
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 34 1.4
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 34 1.9
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 33 2.5
09_04_0338 - 16801189-16801524,16801605-16801679,16801758-168018... 33 3.3
04_01_0301 + 4016588-4016627,4016715-4018837 33 3.3
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 33 3.3
11_06_0533 + 24734177-24735787 32 5.7
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 32 7.6
07_03_0775 - 21413522-21413797,21414016-21414178,21414274-214143... 32 7.6
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 32 7.6
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 37.9 bits (84), Expect = 0.12
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Query: 1221 CVVFNCSEGLDYKMMGRFFSGLATSGAWCCFDEFNRIDIEVLSVIAQQLITIRNAKVAKQ 1280
C G+ ++ + F +G W DE N E L Q++ + + +
Sbjct: 661 CSQIGSEIGMSFQFVEGAFVSALRNGHWILLDEVNLAPPETL----QRIGAVLDGESG-- 714
Query: 1281 TRFMFEGREIKLVRT--C-AAFITMNPGY-AGRTELPDNLKALFRP--ISMMVPDYALIA 1334
T + E ++ + C F MNP AG+ ELP ++ F + ++ D L
Sbjct: 715 TLCLAERGDVDYIERHPCFRMFACMNPATDAGKRELPYTFRSRFTEFFVDDLIDDDDLRL 774
Query: 1335 EVILYSEGFESSKGLAKKMVQMYKLSSEQ 1363
V Y +G ++KG+A +V+ YK + ++
Sbjct: 775 FVSKYLDGLHAAKGVADSIVRFYKAAKKE 803
>04_04_0076 + 22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 35.5 bits (78), Expect = 0.62
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 2632 KILK-HKEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAA 2690
KILK + +L V +VL K + E+++ ++AK +++T+E++ +L + +D
Sbjct: 445 KILKLESDNQELLGRVQSVLNEKSNDTESLQGEIAKRDQQVETLENQVNQLCSIIDEKEQ 504
Query: 2691 RLSRAGKLTQALADEKTRWEESVKAATQQL 2720
+ A + + L ++K + + S+ A QL
Sbjct: 505 LHTCAVEREKNLEEQKLQVQASLAATESQL 534
>03_01_0069 + 549787-549791,550033-550303,550405-552201
Length = 690
Score = 35.1 bits (77), Expect = 0.81
Identities = 25/84 (29%), Positives = 37/84 (44%)
Query: 2637 KEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLSRAG 2696
+EAAA S A L +KE+E ++A + K DE K + L AD++ A L+
Sbjct: 332 EEAAAATASFWAKLDKTKKELEDVKATVDKAKDEAKCLRVAAASLSADLEKQKAELAALR 391
Query: 2697 KLTQALADEKTRWEESVKAATQQL 2720
+ A EE + T L
Sbjct: 392 RRDGVSATSIPSLEEELSRLTAAL 415
>01_06_0343 + 28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 35.1 bits (77), Expect = 0.81
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 2622 YAKVFRVVEPKILKHKEAA---AILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDER 2678
+AK E + KE A A+LK+ A L A +KE+E I+A + M + E
Sbjct: 274 HAKSDEAAEDAARRKKEEAQDKALLKTAEAELDAAKKELETIKAGSFQFMTSMDCTRTEI 333
Query: 2679 LKLQADVDLAAARLSRAGKLTQALADEKTRWEESVKAAT 2717
+++ ++ L A+ +A Q L + + + ++A T
Sbjct: 334 MRVAEEIRLLKAKEKKADAQVQQLNTKLLKAKARLEAVT 372
>04_04_1163 - 31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 34.3 bits (75), Expect = 1.4
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 1806 YGYLFEKLLGAGKPVMFTGNTGVGKTCIAVEILNRMSLTGYYV--PVILNFSAQTSSPRT 1863
Y +LF LG V+ G G GKT +A + SL V P ++N S
Sbjct: 679 YKHLFSSKLGKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYVGESEKNV 738
Query: 1864 QEVIELRLDKRP 1875
+++ E RP
Sbjct: 739 RDIFEKARSARP 750
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 33.9 bits (74), Expect = 1.9
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 2640 AAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLSRAGKLT 2699
A + SVM L A ++ E+Q+A + D+++++E E ++ D++ + R+ A +
Sbjct: 334 AESMSSVMKELDAANALLQVKESQIALLHDKIESLEHEVVRQNEDINASGQRVDAAQRGA 393
Query: 2700 QALADEKTRWEESVKAATQQLHCTTGD 2726
AL E + A Q+ T D
Sbjct: 394 LALRTEIQELRSRLGAMEQEKRGTIKD 420
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 33.5 bits (73), Expect = 2.5
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 2650 LRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVD----LAAARLSRAGKLTQALADE 2705
L + Q+E++ + L+K +EL+ +++++++LQ +VD LA L A K + +A+
Sbjct: 1556 LASAQEEIKECQESLSKCEEELRRIQEKKMELQKEVDRLTELAERALLDASKAEEDVANI 1615
Query: 2706 KTRWEESV 2713
E++V
Sbjct: 1616 MVLAEQAV 1623
>09_04_0338 - 16801189-16801524,16801605-16801679,16801758-16801831,
16801972-16802059,16802185-16802336,16802423-16802582,
16802913-16803128,16803487-16803744,16804202-16804231,
16804738-16804941,16805790-16805855
Length = 552
Score = 33.1 bits (72), Expect = 3.3
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 16/182 (8%)
Query: 2593 THKDFNPDTVVKVSKVCRSMVLWVQAIDMYAKVFRVVEPKILKHKEAAAILKSVMAV--- 2649
T + K ++V S+V + +Y K F V+ K K K + + + AV
Sbjct: 60 TRVQLHQSVATKEAEVA-SLVATLGEHKLYLKSFLVLVSKPAKDKSVVPLKEQLAAVVPV 118
Query: 2650 ---LRAKQ----KEVEAIEAQLAKMMDELKTVEDERLKLQADV----DLAAARLSRAGKL 2698
L+ K+ K+ I++Q+ K+ EL D K + + DL+ +L+
Sbjct: 119 LENLKGKKEERLKQFSDIQSQIEKIRSELSEYSDGDDKANSLIVDENDLSTRKLNNYQAQ 178
Query: 2699 TQALADEKTRWEESVKAATQQLHCTTGDIIVASGCIAYFGAFPSHYRRELELKWIAECSE 2758
AL EK+ V ++HC G + + G G PS ++ LE S
Sbjct: 179 LHALQKEKSDRLHKVLEYVNEVHCLCGVLGIDFGKTVN-GIHPSLHQNGLEQSTNISNST 237
Query: 2759 LE 2760
LE
Sbjct: 238 LE 239
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 33.1 bits (72), Expect = 3.3
Identities = 20/95 (21%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 2634 LKHKEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLS 2693
+ E + K + A++ AK+ +A +A+ K+M EL+ ++ + ++QA DLA +
Sbjct: 597 ISEAEVKRLWKILDALMEAKEVTTKAFDAEKEKIMKELEDLKRKVEEIQASKDLAESEKD 656
Query: 2694 RAGKLTQALADEKTRWEESVKAATQQLHCTTGDII 2728
+ ++ + + K E++V + H +++
Sbjct: 657 KL-RMVEEIQVGKKAAEKAVHDKDAEAHRLRDELV 690
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 207 VLPRQTDTCKWALFQVDAYVRPNGAVELNPSQEIISSYLEKITSYWDEHVRKF--RQFLT 264
V +TD K+ + +D N + L PS + S + K+ W++ + KF + ++T
Sbjct: 226 VFVEETDVAKFTICTIDDPRTLNNTLYLRPSGNVYS--MNKLVDLWEKKINKFLNKIYIT 283
Query: 265 EETL 268
EE L
Sbjct: 284 EEQL 287
>11_06_0533 + 24734177-24735787
Length = 536
Score = 32.3 bits (70), Expect = 5.7
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 2639 AAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLAAARLSRAGKL 2698
AAA M +L K+ E+ AI A LA+ + +E++ +L+A+ RL
Sbjct: 173 AAAENGRAMELLATKEAELAAISANLAESDAMVAQLEEQNSQLRAERGELEKRLEETKAS 232
Query: 2699 TQALADEKTRWEES 2712
++ + +KT EES
Sbjct: 233 SRRVHTQKTEVEES 246
>10_08_0961 + 21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 31.9 bits (69), Expect = 7.6
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 2629 VEPKILKHKEAAAILKSVMAVLRAKQKEVEAIEAQLAKMMDELKTVEDERLKLQADVDLA 2688
+E +L+ +A LK + + + +KE E + ++A++ EL+ +ER+KL+ + +
Sbjct: 646 LERTMLEVSDAEKELKWLRSATGSAEKEYEINQKKIAELKMELERERNERIKLEEEYEEV 705
Query: 2689 AARLSRAGKLTQALADEKTRWEESVKAATQQLHC 2722
+S T+ +K ++ +K L C
Sbjct: 706 KNEVSELTSETEETTIQKL--QDEIKECKAILKC 737
>07_03_0775 - 21413522-21413797,21414016-21414178,21414274-21414351,
21415983-21416176
Length = 236
Score = 31.9 bits (69), Expect = 7.6
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 2606 SKVCRSMVLWVQAIDMYAKVFRVVEPKILKHKEAAAILKS---VMAVLRAKQKEVEAIEA 2662
SK CR V + + + ++ V+EP + ++IL VMA LR++ ++++
Sbjct: 76 SKACREKVRRDKLNERFLELGAVLEPGKTPKMDKSSILNDAIRVMAELRSEAQKLKESNE 135
Query: 2663 QLAKMMDELKT----VEDERLKLQAD 2684
L + + ELK + DE+ KL+A+
Sbjct: 136 SLQEKIKELKAEKNELRDEKQKLKAE 161
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 31.9 bits (69), Expect = 7.6
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 15/237 (6%)
Query: 730 LLKKVEEIWAALEFPVILHKDARDVYV-LGGLDEIQASLDESNIHISTILSSRNCGPIKS 788
LL+ V+ +W + + HK + + L LD A + S H + N
Sbjct: 469 LLELVKGMWHMWDAMYLHHKTQLKIILELKSLDISVAPRETSEQHHDRTVQLWNV----- 523
Query: 789 RVEEWAKNLELFAKTLEEWYACQQTWMYLEVIFSAPDIQ--RQLPNETR-LFSIVDKSWK 845
V EW + F +++ TW+ L VI +++ P+ET V +W
Sbjct: 524 -VHEWHTQFDKFMTYQKQYVGSLYTWIKLNVIPIDTNLKPNSSQPHETTPPIKRVLHAWH 582
Query: 846 DIMRKLAKVPLAMPAATQPKLYEE-FVRNNEMLDQIMKCLEAYLE--TKRVAFPRFFFLS 902
+I+ KL T ++ + V + L MK + + KR F +
Sbjct: 583 EILGKLPDEAAKKAINTFAEIVKTILVHQEDELKLRMKIEDTRRDYGKKRRQFDDWAQKY 642
Query: 903 NDELLEILAQTRNPHAVQPH-LRKCFDAIAKLEFGVKFPESEMEIAEDGTLVEKEMS 958
+ IL + RNP +P + + A+ KLE +K E EM + + + EK +S
Sbjct: 643 IHQTAGILPEDRNPDGARPDPMAERKAAMEKLELSMKELE-EMYVKQCRVVREKSLS 698
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.138 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,290,224
Number of Sequences: 37544
Number of extensions: 3110513
Number of successful extensions: 7694
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7658
Number of HSP's gapped (non-prelim): 47
length of query: 2768
length of database: 14,793,348
effective HSP length: 95
effective length of query: 2673
effective length of database: 11,226,668
effective search space: 30008883564
effective search space used: 30008883564
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 69 (31.9 bits)
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