Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000691-TA|BGIBMGA000691-PA|undefined
(1257 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 42 5e-04
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 42 5e-04
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 36 0.047
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.11
SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|ch... 34 0.11
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.11
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 34 0.11
SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|ch... 34 0.11
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 33 0.33
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.33
SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component Sec9|Sc... 32 0.44
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 32 0.58
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.58
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 31 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 1.8
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 30 1.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 1.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 2.3
SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyc... 30 2.3
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 29 3.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 29 3.1
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 29 3.1
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 29 3.1
SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 5.4
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 28 7.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 7.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 28 7.2
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 28 7.2
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 28 7.2
SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyce... 28 9.5
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/140 (20%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 1069 DGDDSAAEASVSQASNGTTAIASSKGGNDKGRAQTHVQGAYTGGGSFSAQAEISGE-NKA 1127
+ +DS++ +S S++ + + SS +D +++ +G+ + S S+++E S E N +
Sbjct: 124 EDNDSSSSSSDSESESSSEDSDSSSSSSDS-ESESSSEGSDSSSSSSSSESESSSEDNDS 182
Query: 1128 ANSEVTGDKKGASSNAQGSGRNNKSQANVQL-GSETGSILTGSQSEGVMHSSNTQVQGSL 1186
++S + + +S ++ S ++ S++ GS++ S + S+SE +++ S
Sbjct: 183 SSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSD 242
Query: 1187 KGGMADAQARGPGSTSSQAQ 1206
+ ++ S+SS ++
Sbjct: 243 SESESSSEDSDSSSSSSDSE 262
Score = 32.7 bits (71), Expect = 0.33
Identities = 25/142 (17%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 1070 GDDSAAEASVSQASNGTTAIASSKGGNDKGRAQTHVQGAYTGGG---SFSAQAEISGE-N 1125
G + S+ ++++ + I+ +K + + G+ + S S+++E S E N
Sbjct: 67 GKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDN 126
Query: 1126 KAANSEVTGDKKGASSNAQGSGRNNKSQANVQL-GSETGSILTGSQSEGVMHSSNTQVQG 1184
+++S + + +S ++ S ++ S++ GS++ S + S+SE +++
Sbjct: 127 DSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSS 186
Query: 1185 SLKGGMADAQARGPGSTSSQAQ 1206
S + ++ S+SS ++
Sbjct: 187 SDSESESSSEDSDSSSSSSDSE 208
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Query: 364 GGGPSGINTGLSWPSTGTFTRPGSQNTPN-GPSSQG------NANEPHNLLAPNAVYGPG 416
GG +G TG STG F + N PN G G N N +N AP + +G
Sbjct: 373 GGAATGTGTGFG-SSTGGFGS-NTNNQPNSGTMGTGLFGFGANNNTANNNTAPTSTFGGN 430
Query: 417 GNRPYQTDGQSNYQTKPNNAYGTTGGYTPGSNGGLGYHPGSQGNQGGSYPGSTNTQQGPA 476
+ + +N TKP + +G T ++GG + + ++ + T PA
Sbjct: 431 NSSNFSFGANNNAATKP-SGFGFGSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPA 489
Query: 477 GPFNPADIGTNNNAN 491
G +G N N
Sbjct: 490 GTGLFGGLGAGANTN 504
Score = 37.5 bits (83), Expect = 0.012
Identities = 42/178 (23%), Positives = 65/178 (36%), Gaps = 9/178 (5%)
Query: 1027 YGNDLSNTGGGSGQYANVP----YGYGNNQA-GAPQNVVDPNSALLIDGDDSAAEASVSQ 1081
+G + TGG G +N P +G N G QN P +G + +
Sbjct: 17 FGQNNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGLFGNRNNTT- 75
Query: 1082 ASNGTTAIASSKGGNDKGRAQTHVQGAYTGGGSFSAQAEISGENKAANSEVTGDKKGASS 1141
+ G T S G G++ T G T + + + G N A N+ TG S
Sbjct: 76 -TTGGTGFGMSSGTGMFGQSNTPAFGG-TNNATNPSGGGLFGSNTANNNANTGTSFSFGS 133
Query: 1142 NAQGSGRNNKSQANVQLGSETGSILTGS-QSEGVMHSSNTQVQGSLKGGMADAQARGP 1198
NA +G ++ GS T T + + G + S+ V G+ A + P
Sbjct: 134 NAGSTGFGSQGTGGGLFGSSTTPATTNAFGTSGFVSSNANAVNGTANPPYAVTSEKDP 191
Score = 37.5 bits (83), Expect = 0.012
Identities = 39/152 (25%), Positives = 46/152 (30%), Gaps = 3/152 (1%)
Query: 435 NAYGTTGGYTP-GSNGGLGYHPGSQGNQGGSYPGSTNTQQGPAGPFNPADIGTNNNANKY 493
N GTT TP G++ PGS GGS GS T G N A G N
Sbjct: 255 NLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFGSNTTNTGFGSGTNNASGGLFGQNNNT 314
Query: 494 XXXXXXXXXXXXXXXTYSPTSTGQNHMPGVIGSQNGLQGPGGQYAPTNTDGQIPGVQYNP 553
P +G + G G A GQ G +
Sbjct: 315 TSTPSTGLFGGSTFNQQKPAFSGFGSTTNTTNTGTGTGLFGSNNATNTGTGQTTGGLFGG 374
Query: 554 GSTVGHNGLPIPGGLYNSGIGGGPNSFPGTPG 585
+T G G + S PNS GT G
Sbjct: 375 AATGTGTGFGSSTGGFGSNTNNQPNS--GTMG 404
Score = 35.9 bits (79), Expect = 0.036
Identities = 39/176 (22%), Positives = 53/176 (30%), Gaps = 5/176 (2%)
Query: 279 NYEPVKGSYGPRQNVPDGSINGYLPVPS---GSNVYGPNPNSGSGHGIVSNIXXXXXXXX 335
N + G +G N P ++ G + G N P S + G+ N
Sbjct: 20 NNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGLFGNRNNTTTTGG 79
Query: 336 XXXXXXXXXXXXXXTNQVPSQGTK--TPAHGGGPSGINTGLSWPSTGTFTRPGSQNTPNG 393
+N GT T GGG G NT + +TGT GS G
Sbjct: 80 TGFGMSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTGTSFSFGSNAGSTG 139
Query: 394 PSSQGNANEPHNLLAPNAVYGPGGNRPYQTDGQSNYQTKPNNAYGTTGGYTPGSNG 449
SQG A G + + + N Y T P +NG
Sbjct: 140 FGSQGTGGGLFGSSTTPATTNAFGTSGFVSSNANAVNGTANPPYAVTSEKDPQTNG 195
Score = 32.7 bits (71), Expect = 0.33
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 17/175 (9%)
Query: 1018 PSAGPYPNQYGNDLSNTGGGSGQYANVPYGYGNNQAGAPQNVVDPNSALLIDGDDSAAEA 1077
P+ G +G +LS T + P+G N P S L G +
Sbjct: 243 PAFGASTTPFGQNLSGTTNNA-----TPFGTSN------ATNTTPGSGLFGGGSAFGSNT 291
Query: 1078 SVSQASNGTTAIASSKGGNDKGRAQTHVQGAYTGGGSFSAQAE-ISGENKAANSEVTGDK 1136
+ + +GT + G + T G + GG +F+ Q SG N+ TG
Sbjct: 292 TNTGFGSGTNNASGGLFGQNNNTTSTPSTGLF-GGSTFNQQKPAFSGFGSTTNTTNTGTG 350
Query: 1137 KG--ASSNAQGSGRNNKSQANVQLGSETGS-ILTGSQSEGVMHSSNTQVQGSLKG 1188
G S+NA +G ++ + G+ TG+ GS + G ++N Q G
Sbjct: 351 TGLFGSNNATNTG-TGQTTGGLFGGAATGTGTGFGSSTGGFGSNTNNQPNSGTMG 404
Score = 32.7 bits (71), Expect = 0.33
Identities = 61/247 (24%), Positives = 81/247 (32%), Gaps = 22/247 (8%)
Query: 357 GTKTPAHGGGPSGINTGL-SWPSTGTFTRPGSQNTPNGPSSQGNANEPHNLLAPNAVYGP 415
G+ T GG G N S PSTG F GS P+ G + + N G
Sbjct: 297 GSGTNNASGGLFGQNNNTTSTPSTGLFG--GSTFNQQKPAFSGFGSTTNTT---NTGTGT 351
Query: 416 GGNRPYQTDGQSNYQTKPNNAYGTTGGYTPGSNGGLGYHPGSQGNQGGSYPGSTNTQQGP 475
G + ++ +N T G GG G+ G G G G+ + P S G
Sbjct: 352 G---LFGSNNATNTGTGQTTG-GLFGGAATGTGTGFGSSTGGFGSNTNNQPNSGTMGTGL 407
Query: 476 AGPFNPADIGTNNN-ANKYXXXXXXXXXXXXXXXTYSPTSTGQNHMPGV-IGSQNGLQGP 533
G G NNN AN ++ + G GS
Sbjct: 408 FG------FGANNNTANNNTAPTSTFGGNNSSNFSFGANNNAATKPSGFGFGSTTTTPAS 461
Query: 534 GGQYAPTNTDGQIPGVQYNPGSTVGHNGLPIPGGLYNSGIGGGPNSFPGTPGQYQPGSTD 593
GG N + P + GST P GL+ G+G G N+ T GS
Sbjct: 462 GGFSFGQNAN-NAPKPAF--GSTATTAPKPAGTGLF-GGLGAGANTNTATNATGTGGSLF 517
Query: 594 GHNIVTG 600
G+ G
Sbjct: 518 GNANTAG 524
Score = 31.1 bits (67), Expect = 1.0
Identities = 70/305 (22%), Positives = 101/305 (33%), Gaps = 38/305 (12%)
Query: 909 GSYGTGVQSGLQKPGGVYGSGLNGIQNNGVPGTGDNYVPGGQSNVPGGYGISNRPFNLDG 968
G TG +G G +GS N N+G GTG + G +N F G
Sbjct: 373 GGAATGTGTGFGSSTGGFGSNTNNQPNSGTMGTG-LFGFGANNNTANNNTAPTSTFG--G 429
Query: 969 TGSQQGPYNPSLPGQNGPYGTNMVGQGSGSISPXXXXXXXXXXXXXXXXPSAGPYPNQYG 1028
S + + P G G GS + +P P+ G
Sbjct: 430 NNSSNFSFGANNNAATKPSG---FGFGSTTTTPASGGFSFGQNANNAPKPAFGSTAT--- 483
Query: 1029 NDLSNTGGGSGQYANVPYGYGNNQAGAPQNVVDPNSALLIDGDDSAAEASVSQASNGTTA 1088
+ G+G + + G N A N +L G+ + A +++ ++N
Sbjct: 484 --TAPKPAGTGLFGGLGAGANTNTA---TNATGTGGSLF--GNANTAGSNMFGSAN---- 532
Query: 1089 IASSKGGNDKGRAQTHVQGAYTGGGSFSAQAEISGENKAANSEVTGDKKGASSNAQGSGR 1148
+S+ G G QT+ + TG G F G N A + G S G
Sbjct: 533 -SSTPGTGLFGSTQTNNATSNTGTGLF-------GSNNANTTNTGGSLFNKPSTTTGGLF 584
Query: 1149 NNKSQANVQLGSETGSILTGSQSEGVMHSSNTQVQGSLKG-GMADAQARGPGSTSSQAQI 1207
N Q S T S L G+ ++N Q Q S G G+ G QA I
Sbjct: 585 GN---TTAQQPSTTTSGLFGAS------NTNNQAQTSNFGTGLFGGSQAGQQQQPLQASI 635
Query: 1208 GFTPY 1212
PY
Sbjct: 636 DQNPY 640
Score = 29.9 bits (64), Expect = 2.3
Identities = 38/116 (32%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Query: 356 QGTKTPAHGGGPSGINTGLSWPSTGTFTRPGSQ-NTPNGPSSQGNANEPHNLLAPNAVYG 414
Q T P G S N GL T T G+ +G G +N P NA
Sbjct: 52 QNTTQPLFG---SNTNGGLFGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTNNATNP 108
Query: 415 PGGNRPYQTDGQSNYQTKPNNAYGTTGGYTPGSN-GGLGYHPGSQGNQGGSYPGST 469
GG G T NNA T ++ GSN G G+ GSQG GG + ST
Sbjct: 109 SGG-------GLFGSNTANNNA-NTGTSFSFGSNAGSTGF--GSQGTGGGLFGSST 154
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 410 NAVYGPGGNRPYQTDGQSNYQTKPNNAYGTTGGYTPGSNGGL-GYHPGSQG 459
N +Y G + T Q N N Y TTGG+T G+N + G +P S G
Sbjct: 1492 NPIYQGSGTSTWSTVRQWNGSATYNYTYYTTGGFTGGNNTNVTGLYPSSAG 1542
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 371 NTGLSWPSTGTFTRPGSQNTPNG---PSSQG-NANEPHNLLAPNAVYGPGGNRPYQTDGQ 426
NTG P T PG P G P G + +P + + P G G +P +T
Sbjct: 108 NTGFMQPQQ-TGAIPGFAPQPTGFVQPQPTGFMSQQPASFMQPQRTGGAGFIQPQRTGAM 166
Query: 427 SNYQTKPNNAY--GTTGGYTPGSNGGLGYHP 455
YQ + NN TGG+ P + G + P
Sbjct: 167 PAYQPQMNNFMQPQKTGGFAPQATGFMQTQP 197
>SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 34.3 bits (75), Expect = 0.11
Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 7/146 (4%)
Query: 1049 GNNQAGAPQNVVDPNSALLIDGDDSAAEASVSQASNGTTAIASSKGGNDKGRAQTHVQGA 1108
GN+ V + A+ +D D + ++V SNG + + D A
Sbjct: 46 GNSYVHLHPFYVGDSGAIYLDPTDGTSTSAVFSMSNGRLVVGNLYASVDSNGTTIFKSDA 105
Query: 1109 YTGGGSFSA-QAEISGENKAANSEVTGDKKGASSNAQ------GSGRNNKSQANVQLGSE 1161
FSA A G N N + AS N Q G+G N + A + + +
Sbjct: 106 NAASTKFSAGDATNVGYNLLYNGTQSAVACPASDNDQVYQVYFGAGNGNPNCAGIAIEAF 165
Query: 1162 TGSILTGSQSEGVMHSSNTQVQGSLK 1187
+ S S S++T+V S K
Sbjct: 166 VSPSSSSSSSSSAATSTSTRVSSSAK 191
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 521 PGVIGSQNGLQGPGGQYAPTNTDGQIPG-VQYNPGSTVGHNGLPIPGGLYNSGIGGGPNS 579
PG G G G G + G PG + PG G G GGL G GGGP
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG-GFGGGL--GGFGGGPGG 260
Query: 580 FPGTPG 585
F G PG
Sbjct: 261 FGGGPG 266
Score = 32.7 bits (71), Expect = 0.33
Identities = 50/206 (24%), Positives = 65/206 (31%), Gaps = 19/206 (9%)
Query: 391 PNGPSSQGNA--NEPHNLLAPNAVYGPGGNRPYQTDGQSNYQTKPNNAYGTTGGYTPGS- 447
P G +S A N +N A N N + +N T N A T+ Y P +
Sbjct: 51 PPGATSVNTAVYNNNNNTSAANTNAAYNANTA--ANANANTATTTNAAATTSAAYNPNAP 108
Query: 448 -NGGLGYHPGSQGNQGGSYPGSTNTQQGPAGPFNPADIGTNNNANKYXXXXXXXXXXXXX 506
N Y+P + + GS N G + + Y
Sbjct: 109 ANTNAAYYPNAAATTTTNADGSDKGLFSGLTSSNGYTTGNSYSRPSYVAPVAAGLGGLAL 168
Query: 507 XXTYSPTSTGQNHMPGVIGSQNGLQGPGGQYAPTNTDGQIPGVQYNPGSTVGHNGLPIPG 566
S H G G G G GG + G PG PG G G G
Sbjct: 169 GGLASHALGNLFHHRGHNGG--GFGGFGG-----GSGGPPPG----PGGFGGFGGFGGEG 217
Query: 567 GLY--NSGIGGGPNSFPGTPGQYQPG 590
+ + G GGGP F G PG + G
Sbjct: 218 HHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 414 GPGGNRPYQTDGQSNYQTKPNNAYGTTGGYTPGSNGGLGYHPGS-QGNQGGSYPGSTNTQ 472
GPGG + G + + +G G G GG G PG G GG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 473 QGPAGPFNP 481
GP G P
Sbjct: 263 GGPGGHGGP 271
Score = 28.3 bits (60), Expect = 7.2
Identities = 28/85 (32%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 908 GGSYGTGVQSGLQKPG-GVYGSGLNGIQNNGVPGTGDNYVPGGQSNV---PGGYGISNRP 963
GG G G SG PG G +G G G G G GG PGG+G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFG-GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 964 F--NLDGTGSQQGPYNPSLPGQNGP 986
F L G G G + G GP
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 34.3 bits (75), Expect = 0.11
Identities = 47/205 (22%), Positives = 71/205 (34%), Gaps = 21/205 (10%)
Query: 282 PVKGSYGPRQNVPDGSINGYLPVPSGSNVYGPNPNSGSGHGIVSNIXXXXXXXXXXXXXX 341
PV+G++ + P S ++ PS +V PNPN G + +
Sbjct: 51 PVEGTHSASVH-PSTSSTSHISSPSAFSVQNPNPNDAPFVGNI-GLDASGFSSGGMSEYY 108
Query: 342 XXXXXXXXTNQVPSQGTKTPAHGGGPSGINTGLSWPSTGTFTRPGSQNTP---NGPSSQG 398
+ V Q T+ P + PS + P P S N+P + P +
Sbjct: 109 PRSVSMQQSQDVHFQNTEIPYYHRSPSSDSFS---PGVVASVNPNSNNSPTFYSNPPALS 165
Query: 399 NANEPHNLLAPNAVYGPGGNRPYQTDGQ------SNYQTKPNNAYGTTGGYTPGSNGGLG 452
N P N N+ Y P + +Q G + Y P + YG G T SN
Sbjct: 166 NIPIPLN----NSPYRP-EDAYFQLQGAGVKADINPYNLSPYSQYGPEG--TAYSNAQAH 218
Query: 453 YHPGSQGNQGGSYPGSTNTQQGPAG 477
+ G+ + S P T P G
Sbjct: 219 HQDGAPLQRVCSAPDPPKTSMPPFG 243
>SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 34.3 bits (75), Expect = 0.11
Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 7/146 (4%)
Query: 1049 GNNQAGAPQNVVDPNSALLIDGDDSAAEASVSQASNGTTAIASSKGGNDKGRAQTHVQGA 1108
GN+ V + A+ +D D + ++V SNG + + D A
Sbjct: 46 GNSYVHLHPFYVGDSGAIYLDPTDGTSTSAVFSMSNGRLVVGNLYASVDSNGTTIFKSDA 105
Query: 1109 YTGGGSFSA-QAEISGENKAANSEVTGDKKGASSNAQ------GSGRNNKSQANVQLGSE 1161
FSA A G N N + AS N Q G+G N + A + + +
Sbjct: 106 NAASTKFSAGDATNVGYNLLYNGTQSAVACPASDNDQVYQVYFGAGNGNPNCAGIAIEAF 165
Query: 1162 TGSILTGSQSEGVMHSSNTQVQGSLK 1187
+ S S S++T+V S K
Sbjct: 166 VSPSSSSSSSSSAATSTSTRVSSSAK 191
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 32.7 bits (71), Expect = 0.33
Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 7/120 (5%)
Query: 377 PSTGT----FTRPGSQNTPNGPSSQGNANEPHNLLAPNAVYGPGGNRPYQTDGQSNYQTK 432
P+TG+ F +P S + N S+ AN + P PG N T S T
Sbjct: 195 PATGSGGFSFGKPASLGSTNNASTSTTANSGFSFGKPATTSAPGSNTTV-TPSSSITGTN 253
Query: 433 PNNAYGTTGGYTPGSNGGLGYHPGSQGNQGGSYPGSTNTQQGPAGPFNPADIGTNNNANK 492
+ + G P + G P Q + G+T T G F+ T + NK
Sbjct: 254 DSKPAASNTGSAPTTGFSFG-KPAGQAASTATDKGTTTTSSAGTG-FSFGKPATTEDTNK 311
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 32.7 bits (71), Expect = 0.33
Identities = 27/164 (16%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 1055 APQNVVDPNSALLIDGDDSAAEASVSQASNGTTAIASSKGGNDKGRAQTHVQGAYTGGGS 1114
AP + S+ S+ +S S +S+ + + +SSK + + + + + S
Sbjct: 133 APSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSS--SSSSSKSSS 190
Query: 1115 FSAQAEISGENKAANSEVTGDKKGASSNAQGSGRNNKSQANVQLGSETGSILTGSQSEGV 1174
S+ + S + +++S+ + + S+++ S + + S +G+I++ +++
Sbjct: 191 SSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTAST 250
Query: 1175 MHSSNTQVQGSLKGGMADAQARGPGSTSSQAQIGFTPYTHGDAS 1218
SS+ S + + + +++S A + DAS
Sbjct: 251 DDSSSASSATSSVSSVVSSASSALSASASSASASVSSSASSDAS 294
>SPBC26H8.02c |sec9||SNAP-25 homologue, t-SNARE component
Sec9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 910 SYGTGVQSGLQKPGGVYGSGLNGIQNNGVPGTGDNYVPGGQSNVPGGYGISNRPFNLDGT 969
SY + + YGS N G G+ +NY G SN G G SN N T
Sbjct: 42 SYSSNSYNDNNNSNSTYGSS----NNYGNYGSSNNYGSYGASNTYGSNGSSNNYGNYGAT 97
Query: 970 GSQQGPYNPSLPGQNGPY 987
S P +N PY
Sbjct: 98 NSNGDAGYSITPIRNDPY 115
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 31.9 bits (69), Expect = 0.58
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 1095 GNDKGRAQTHVQGAYTGGGSFSAQAEISGENKAANSEVTGDKKGASSNAQGSGRNNKSQA 1154
GN G A T A S S A +S + S T K +SS++ SG ++ S +
Sbjct: 494 GNFLGTA-TSYSSASASYPSTSMSASLSSVH---TSSATSSSKSSSSSSSRSGSSSSSSS 549
Query: 1155 NVQLGSETGSILTGSQSEGVMHSSNTQVQGSLKGGMADAQARGPGSTSSQA 1205
S +GS T + + +H+S + S + A + S+SS +
Sbjct: 550 RSGSTSSSGSSHTITSTSQSVHTSGSSTSTSSVAVTSTAYSSSSSSSSSSS 600
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 161 GIPSGLPSGAIGTPGNNLPFDPTGGSRLTXXXXXXXXXXXXXXXPGSTGINGAYRPPGAG 220
G+P GA G P N+ P + P GI GA PPGA
Sbjct: 502 GVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPPGAP 561
Query: 221 GTYGPNQIGNGAFNPALNGIPGI 243
G+Y ++ N LN PG+
Sbjct: 562 GSYNTSESSN------LNAPPGV 578
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 31.1 bits (67), Expect = 1.0
Identities = 36/141 (25%), Positives = 54/141 (38%), Gaps = 5/141 (3%)
Query: 1073 SAAEASVSQASNGTTAIASS--KGGNDKGRAQTHVQGAYTGGGSFSAQAEISGENKAANS 1130
++ +S S AS ASS + ++ + + T G+ S+ +EI A+NS
Sbjct: 567 NSLSSSTSSASTSYIPSASSSYEVASNSSDYYSQTVSSITASGTTSSTSEIVS-TPASNS 625
Query: 1131 EVTGDKKGASS-NAQGSGRNNKSQANVQLGSETGSILTGSQSEGVMHSSNTQVQGSLKGG 1189
TG G SS N G ++ S TGS S SS S
Sbjct: 626 N-TGSLNGTSSFNVNSVGPSSSQTTPTSSSSITGSQSLKETSSPAYVSSTVSYTSSSVDS 684
Query: 1190 MADAQARGPGSTSSQAQIGFT 1210
+ + G S+ SQ+ G T
Sbjct: 685 SSTYNSTGSSSSDSQSFSGTT 705
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 387 SQNTPNGPSSQGNANEPHNLLAPNAVYGPGGNRPYQTDGQSNYQTKPNNAYGTTGGYTPG 446
+Q G S G A N+ P + Y P N N QT+P N Y ++ G G
Sbjct: 1341 NQTGMEGYSEYGYAQPAGNMANPMS-YDPVSNASLYMPSDYNQQTQPANYYDSSFGGAQG 1399
Query: 447 SN 448
+N
Sbjct: 1400 AN 1401
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 368 SGINTGLSWP-STGTFTRPGSQNTPNGPSSQGNANEPHNLLAP 409
+G NTG S P + T TR + +TP +Q AN P + P
Sbjct: 198 NGNNTGTSTPVNASTDTRKSTASTPQLQQTQAQANAPQQRINP 240
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Query: 1081 QASNGTTAIASSKGGNDKGRAQTHVQGAYTGGGSFSAQAEISGENKAANSEVTGDKKGAS 1140
+ T+++ +K K A G S SA+ E SG++ +A + TG +KG
Sbjct: 1711 KTDESTSSVTETKPVTSKPTASKADVGQNATEAS-SAKREPSGKSLSARLQGTGKQKGVQ 1769
Query: 1141 SNAQGSGRNNK-SQANVQLGSETGSILTG-SQSEGVMHSSNTQVQGSLKGGMADAQARGP 1198
A K + + + I T + ++ S+T GSLK DA G
Sbjct: 1770 RPAVSRPVPMKPDSGKLSITGASKRIATSKNAAQNAKELSSTAKSGSLKRQRDDANKGGS 1829
Query: 1199 GSTSSQAQ 1206
S +A+
Sbjct: 1830 SSNQKKAK 1837
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 438 GTTGGYTPGSNGGLGYHPGSQGNQGGSYPGSTNTQQG 474
G GG G+ GG G G++G +GGS G + G
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 443 YTPGSNGGLGYHPGSQGNQGGSYPGSTNTQQGPAG 477
YTPGS GG G GS+G +GG G G G
Sbjct: 3 YTPGSRGGRG---GSRGGRGGFNGGRGGFGGGRGG 34
>SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 531 QGPGGQYAPTNTDGQIPGVQYNPGSTVGHNGLPI 564
Q PGG Y T+T +P + P ST H L I
Sbjct: 300 QMPGGLYTDTSTSSSVP-INVKPNSTTPHASLQI 332
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 278 TNYEPVKGSYGPRQNVPDGSINGY-LPVPSGSNVYGPNPNS 317
TN + +G+ P N+ G+ +P+PS S ++GPNP +
Sbjct: 96 TNIQAGQGANNPLANLTSARYAGFNIPMPSAS-MFGPNPEN 135
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 1108 AYTGGGSFSAQAEISGENKAANSEVTGDKKGASSNAQGSGRNNKSQAN 1155
A +G + +AQ G + AA S + G G+SSN S NN + +N
Sbjct: 484 AQSGVLTNAAQGSSGGLSAAAVSGLIGSFMGSSSNNSNSSNNNSNTSN 531
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 378 STGTFTRPGSQNTPN-GPSSQGNANEPHNLLAPNAVYGPGGNRPYQTDGQSNYQTKPNNA 436
S+G + N+ N ++ GN N+ H + +++ G + + G SN Q NN
Sbjct: 559 SSGNNNNNNNSNSGNYNNNNSGNNNQQHQQ-SSSSLQGLASSFLNSSSGNSNKQNYNNN- 616
Query: 437 YGTTGGYTPGSNGGLGYHPGSQGNQGGSYPGST 469
G+N Y+ + +QGG+ G +
Sbjct: 617 ----NNQNYGNNNNQNYNNNNNSSQGGNSQGGS 645
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 366 GPSGINTGLSWPSTGTFTRPGSQNTPNGPSSQGNANEPHNLLAP--NAVYGPGGNRPYQT 423
G SG N + ++G + S N N Q +++ L + N+ G + Y
Sbjct: 558 GSSGNNNNNNNSNSGNYNNNNSGN--NNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNN 615
Query: 424 DGQSNYQTKPNNAYGTTGGYTPGSN--GGLG 452
+ NY N Y + G N GG G
Sbjct: 616 NNNQNYGNNNNQNYNNNNNSSQGGNSQGGSG 646
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 1176 HSSNTQVQGSLKGGMADAQARGPGSTS---SQAQIGFTPYTHGDASHDVQKSPF 1226
H ++T + G + G +A RG + I FT + HGD S + +PF
Sbjct: 2331 HVASTLMTGQIVGAVATMIGRGASPNREGPANVFIDFTKWNHGDGSSILASAPF 2384
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 907 PGGSYGTGVQSGLQKPGGVYGSGLNGIQNNGVPGTGDNYVP--GGQSNVP-GGYGISNRP 963
P ++ G QSG G+ N P TG + P G + P G G + P
Sbjct: 1019 PSSAFAFGNQSGTNPAAPAGFGGITNTATNNPPSTGFTFTPSNAGSTAAPMFGAGNTPNP 1078
Query: 964 FNLDGTGSQQ---GPYNPSLPGQNGP 986
SQ G PS P N P
Sbjct: 1079 SGSINNASQAFAFGSGEPSNPASNPP 1104
>SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/102 (21%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 1026 QYGNDLSNTGGGSGQYAN--VPYGYGNNQAGAPQNVVDPNSALLIDGDDSAAEASVSQAS 1083
Q+G + +G Q + +P +GN+ N NSAL + D + +S ++++
Sbjct: 206 QFGMNTDASGDAHLQASEFLLPNLFGNSSTSPQDNFGTSNSALSRNLDLFGSPSSENKST 265
Query: 1084 NGTTAIASSKGGNDKGRAQTHVQGAYTGGGSFSAQAEISGEN 1125
G+ ++ ++ +AQ + A+ GSF++ + +N
Sbjct: 266 AGSASLFPNQQMGIDLQAQENYSAAFGNDGSFASHLTNTFDN 307
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 28.3 bits (60), Expect = 7.2
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 2/129 (1%)
Query: 1098 KGRAQTHVQGAYTGGGSFSAQAEISGENKAANSEVTGDKKGA--SSNAQGSGRNNKSQAN 1155
K + + H + G F ++ + S + SE D S + + + N + +
Sbjct: 676 KPKRKKHKKQRLEAGEEFDSEDDNSDDMDIEESEEEMDTNMVIDSGSRRVTRSQNATSQS 735
Query: 1156 VQLGSETGSILTGSQSEGVMHSSNTQVQGSLKGGMADAQARGPGSTSSQAQIGFTPYTHG 1215
+ GSE GS + G+ + +SNTQ+ A +R S+ G + +
Sbjct: 736 QESGSEIGSSIAGTAGSYNVGTSNTQLSWPSTHSTLPATSRELASSDRNINTGTSVASEV 795
Query: 1216 DASHDVQKS 1224
AS Q +
Sbjct: 796 SASVSEQST 804
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 262
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 1073 SAAEASVSQASNGTTAIASSKGGNDKGRAQTHVQGAYTGG 1112
+++ +++S S TT+ +SS GN + T GA + G
Sbjct: 204 ASSNSTISGFSTSTTSASSSAAGNSSSSSYTSYSGAVSNG 243
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 552 NPGSTVGHNGLPIPGGLYNSGIGGGPNSFPGTPGQYQPGSTDGHNIVTGP---GVQYRPD 608
N + V H +P P Y + GG P+ P P QP S +++ ++ +P
Sbjct: 83 NVNTQVSHTAIPNPANGYAAVYGGPPSQLPPPP---QPQSHPNVTVISASPARAIEQQPT 139
Query: 609 IVS 611
I+S
Sbjct: 140 ILS 142
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 396 SQGNANEPHNLLAPNAVYGPGGNRP-YQTDGQSNYQTKPNNAYGTTGGYTPGS 447
++G+A+ PH + N V P G R Y+T+ N+Q YG+ + G+
Sbjct: 302 AKGSASHPHGSGSSNGV-APNGKRALYKTEPCKNWQISGTCRYGSKCQFAHGN 353
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 28.3 bits (60), Expect = 7.2
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 1053 AGAPQNVVDPNSALLIDGDDSAAEASVSQASNGTTAIASS--KGGNDKGRAQTHVQGAYT 1110
+GAP++ + S IDG S+AE ++ + I S K G K + +
Sbjct: 80 SGAPESQTEEESDRKIDGTGSSAEGGDGSGTDSISVIKKSFFKSGRKKKDVPKSRNVSRS 139
Query: 1111 GGGSFSAQAEISGE---NKAANSEVTGDKKGASSNAQGSGRNNKSQANVQLG 1159
G S Q E + E+ KK ++ A+ N+ +V++G
Sbjct: 140 NGADTSVQREKLKDIFSPHGKEKELAHIKKTVATRARTYSSNSIKICDVEVG 191
>SPAC637.13c |||cytoskeletal signaling protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 498
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 361 PAHGGGPSGINTGLSWPSTGTFTRP--GSQNTPNGPSSQGNANEPHNLL 407
PA S +NT +S PS+ T GS+ P+ SQGN+ +N +
Sbjct: 437 PAVERQSSTMNTRMSQPSSAVNTNRSYGSEQIPSYADSQGNSGANNNFI 485
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.306 0.132 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,416,210
Number of Sequences: 5004
Number of extensions: 235369
Number of successful extensions: 403
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 323
Number of HSP's gapped (non-prelim): 85
length of query: 1257
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1176
effective length of database: 1,957,154
effective search space: 2301613104
effective search space used: 2301613104
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 59 (27.9 bits)
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