Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000690-TA|BGIBMGA000690-PA|IPR001478|PDZ/DHR/GLGF
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 1e-22
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-05
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.002
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 41 0.003
SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.006
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 40 0.008
SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11) 39 0.014
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.014
SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20) 38 0.018
SB_25105| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.018
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 38 0.024
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.032
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 37 0.042
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.055
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.073
SB_31638| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.073
SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18) 36 0.097
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 36 0.097
SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18) 35 0.17
SB_11669| Best HMM Match : PDZ (HMM E-Value=6.4e-15) 35 0.22
SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05) 34 0.39
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 33 0.52
SB_53163| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.68
SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.68
SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.90
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 32 1.2
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 32 1.2
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 32 1.6
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.6
SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0) 31 2.1
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 31 2.7
SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12) 31 2.7
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 31 3.6
SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 30 4.8
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 30 4.8
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 30 4.8
SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33) 30 6.3
SB_10935| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.3
SB_42888| Best HMM Match : EGF (HMM E-Value=8.4e-20) 30 6.3
SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 8.4
SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
>SB_12386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 105 bits (252), Expect = 1e-22
Identities = 53/128 (41%), Positives = 83/128 (64%), Gaps = 2/128 (1%)
Query: 53 RRRTIIVEKKN-GSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILS 111
RRRTI + + N G +GFTLQ+YGI ++ E+E +T+V VE +GPA +AGMR GD+I+S
Sbjct: 386 RRRTIQMTRNNEGGFGFTLQTYGI-VQQNGEVEFMTFVLAVEEDGPAYMAGMRPGDIIVS 444
Query: 112 INGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCVRKVELHLKYINLQRTLQSKMRELEQ 171
+ DVE +H +V + +R+VV+F D +R++ L+ + L+ LQSK E E
Sbjct: 445 VENRDVEEEDHRVLVSLLQEAPVSIRLVVVFVDAIRRMHLNTRIKVLKTELQSKEDEFEA 504
Query: 172 LSIRERQL 179
L +E+++
Sbjct: 505 LCRKEQEI 512
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 47.6 bits (108), Expect = 3e-05
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 53 RRRTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSI 112
R RT + ++ G +GFT++ G +V +VE + PA GMR GD++L +
Sbjct: 79 RIRTFDLRRRRGRFGFTVRGSGP-----------VFVHNVEPKSPAFTVGMRTGDLVLKV 127
Query: 113 NGMDVERAEHAAIVDAINSCDSRMRMVVI 141
NG+ V A + + +C + +V+I
Sbjct: 128 NGVSVRHANAEQVQQVVEACGPIVSVVLI 156
Score = 39.1 bits (87), Expect = 0.010
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 89 VDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
V V+ PAA A ++ GD IL ING++V HA +V+ + S+ ++V
Sbjct: 486 VRSVDKGSPAAQARLKPGDHILEINGLNVRNKTHAHVVELLKGSGSQPTLLV 537
Score = 38.7 bits (86), Expect = 0.014
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 92 VEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
V+ PAA A ++ GD IL ING++V HA +V+ + S+ ++V
Sbjct: 321 VDKGSPAAQARLKPGDHILEINGLNVRNKTHAHVVELLKGSGSQPTLLV 369
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 44.0 bits (99), Expect = 4e-04
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 59 VEKKNGSYGFTLQSYGIHYKKEQEIEVITY-VDHVEMEGPAALAG-MREGDVILSINGMD 116
VE K S G S GIH I V HV G AA G +R+GD +LS+NG
Sbjct: 2507 VELKKDSKG----SLGIHVSGGVGTNCIDVTVRHVVPLGVAAKDGRIRKGDRVLSVNGRS 2562
Query: 117 VERAEHAAIVDAINSCDSRMRMVVIFEDCVRKVELHLKYINLQRTLQSKMRELEQLSIRE 176
+ H +++ + + R+ +VV + RK L L +N+ L +K E +E
Sbjct: 2563 TKGLTHQEVLNLLQNLPRRVVLVVSRSNFPRKRSLSLSSLNI---LHNKSSE------KE 2613
Query: 177 RQLFDANWKTH-SLPSQKKKSSPNDV----ISDVEDSNESQNMGTTY 218
W T P +K SP+DV + + + E +N +TY
Sbjct: 2614 PTTESGAWPTKMESPKKKNLMSPSDVNPPSLEKIPLTLERENTDSTY 2660
>SB_33963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 60 EKKNGSYGFTL-QSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVE 118
E + SYG TL + YG E++ VD + + PA LAG+ +GDV+++++G +E
Sbjct: 209 ETSSISYGMTLIKEYG-----NTEMDKFIMVDVITPKSPADLAGLHKGDVLIAVDGQKIE 263
Query: 119 RAEHAA 124
+ AA
Sbjct: 264 SLKQAA 269
Score = 29.5 bits (63), Expect = 8.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 191 SQKKKSSPNDVISDVEDSNESQNMGTTYRPTLSSENVTAAKP 232
S K++SS IS +E S+N+ RP SS T KP
Sbjct: 346 STKQRSSTLSTISPIETKETSKNVTEATRPIRSSTVATDGKP 387
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 40.7 bits (91), Expect = 0.003
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 89 VDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSC 132
+D + PA A +R GD IL +NG VE HA ++ +I+ C
Sbjct: 70 IDSIAQGSPAERANLRIGDEILEVNGTSVENFSHAEVILSIHKC 113
>SB_36084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 39.9 bits (89), Expect = 0.006
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 88 YVDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVI-FEDCV 146
+V V GPA AG+ GD I+S+NG V ++ +++ I ++ + VI EDCV
Sbjct: 188 FVRQVAPNGPADKAGLSSGDQIVSVNGNQVLNRTYSQVIELIQKSVEQVELGVIPKEDCV 247
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 39.5 bits (88), Expect = 0.008
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 54 RRTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSIN 113
R I++EK YGFTLQ+ ++Y V V V+ A AG+R GD++ +N
Sbjct: 370 RPPIVLEKGPRGYGFTLQAIRVYYGDTNYFTVHHLVSGVDHGSSAFEAGLRPGDLLTHVN 429
>SB_33275| Best HMM Match : PDZ (HMM E-Value=5.2e-11)
Length = 881
Score = 38.7 bits (86), Expect = 0.014
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 63 NGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEH 122
+G YGFTL S G + + PA AG++ GD IL +NG VER H
Sbjct: 286 SGGYGFTLSSQGP-----------CVLSCILASSPAHKAGLKPGDQILYVNGSSVERHPH 334
Query: 123 AAIVDAI-NSCDSRMRMVV 140
+V I S D R+ + V
Sbjct: 335 EQVVKLIARSPDGRVNLGV 353
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 38.7 bits (86), Expect = 0.014
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 55 RTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSING 114
R +I+E+K+ GF + G KE EI V++ VD + A AG+++GD IL +N
Sbjct: 2554 RVVILERKSRRTGFGFKIQG-ELLKEMEI-VVSQVDEWSI---AERAGLQKGDRILRLND 2608
Query: 115 MDVERAEHAAIVDAINSCD 133
+ ERA +V+ + S +
Sbjct: 2609 VCCERAIKLDVVNLVKSAN 2627
Score = 37.9 bits (84), Expect = 0.024
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 92 VEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVI--FEDCVRKV 149
VE PA AG+R+GD IL +NG V+ H IV I + S +++ + E R +
Sbjct: 2688 VEDGSPAERAGVRKGDFILQVNGNAVKGLPHFQIVRLIITAASPIKLTLKPGSERSSRSM 2747
Query: 150 ELHLKYINLQRTLQSKMRELEQLSIRERQLFD 181
L + N++ + +S + + + L++R + D
Sbjct: 2748 PLEVDE-NVENSAESLVMQAKTLALRSQSSND 2778
>SB_56567| Best HMM Match : PDZ (HMM E-Value=5.6e-20)
Length = 285
Score = 38.3 bits (85), Expect = 0.018
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 54 RRTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEM-----EGPAAL-AGMREGD 107
+R + ++K +GS GF ++ K ++ + Y V + GPA G+R GD
Sbjct: 138 QRVVEIDKVDGSLGFNIKGGEKKRLKNEQWLIYRYYSPVFIVSITPNGPADKHGGLRPGD 197
Query: 108 VILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
++L++N + EH+ V + S +R+ V
Sbjct: 198 ILLAVNDRSLVGLEHSQAVRILKSVSGTVRLTV 230
>SB_25105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 38.3 bits (85), Expect = 0.018
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 101 AGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCVRKVELH 152
AG++ GD+++ +NG DV+ EH +V+ I + + VI ++ V H
Sbjct: 2 AGVQVGDIVIGVNGEDVKWGEHHDVVETIRHMTEHVTLQVITPHSLKDVAAH 53
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 37.9 bits (84), Expect = 0.024
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 55 RTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSING 114
RT+IV K + G + G KE + ++ H M A G+ GD IL++NG
Sbjct: 245 RTVIVNKDK-TEGLGISITG---GKEHGVPILISEIHDGMPA-ARCGGLYVGDAILAVNG 299
Query: 115 MDVERAEHAAIVDAINSCDSRMRMVVIF 142
+D++ A+H V ++S + M V++
Sbjct: 300 IDLQDAKHNDAVKILSSIHGEITMEVLY 327
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 37.5 bits (83), Expect = 0.032
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 102 GMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
G++ GD +LS+NG+ VE H VD + +R+VV
Sbjct: 575 GLKRGDQLLSVNGVSVEGENHEKAVDLLKEAQGSVRLVV 613
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 37.1 bits (82), Expect = 0.042
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 84 EVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEH 122
E YV V+ EGPAA G++ GD IL +NG+++ H
Sbjct: 558 ETSIYVTKVQPEGPAAF-GLKPGDKILEVNGINLRNTTH 595
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 36.7 bits (81), Expect = 0.055
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 25 SKEDSLDNSIRESFKSERSGGAKNEE---DWRRRTII-VEKKNGSYGFTLQSYGIHYKKE 80
+++ S S+R++ S S +++E D R ++ +EK S G ++ S G++
Sbjct: 1219 TEQSSQRESLRDTMTSHSSVTSEDEMYQGDSEMRFVVELEKIGSSLGLSV-SGGVN--TT 1275
Query: 81 QEIEVITYVDHVEMEGPAALAG-MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMV 139
++ I YV + + GPA G +R GD IL +NG+ + H V+ I R R+V
Sbjct: 1276 VKLGGI-YVKSLMLNGPADRNGKIRIGDRILEVNGVSLVGVTHKQAVEIIKRAPQRCRLV 1334
Query: 140 V 140
+
Sbjct: 1335 I 1335
Score = 30.7 bits (66), Expect = 3.6
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 97 PAALAG-MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCV----RKVEL 151
PA G +++GD IL ++ +D+ +H A V+ + + +R+ V+ V K
Sbjct: 1707 PAKSDGRLQKGDQILQVDDVDISEMKHMAAVNVLRATKKHVRLEVLRRPTVVVSDSKSGE 1766
Query: 152 HLKYINLQRTLQSKM 166
+ +NL RT++ ++
Sbjct: 1767 TYETVNLTRTVRGRI 1781
Score = 29.5 bits (63), Expect = 8.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 103 MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
+R GD IL +NG DV+ HA ++ + + + + +
Sbjct: 1952 LRVGDQILKVNGEDVQGMSHARVIGMLRKISTTVDLEI 1989
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 36.3 bits (80), Expect = 0.073
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 71 QSYGIHYKKEQEIEVITYVDHVEMEGPAALAG-MREGDVILSINGMDVERAEHAAIVDAI 129
Q YG + QE+++ YV + G A L G ++ GD +L ING + H + I
Sbjct: 1280 QGYGFSIRGGQEMDMPIYVLKIAEGGVADLDGRIKVGDEVLEINGRSTQHMLHTDAISMI 1339
Query: 130 NSCDSRMRMVV 140
S++R+V+
Sbjct: 1340 RG-GSKVRLVL 1349
>SB_31638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1526
Score = 36.3 bits (80), Expect = 0.073
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 120 AEHAAIVDAINSCDSRMRMVVIFEDCVRKVELHLKYINLQRTLQSKMRELEQLSIRERQL 179
A+HA + +SC + RM ++ + L +++ NL RT S M Q + + +
Sbjct: 436 AQHADSLKVTSSCSAWQRMQILMDRVPLVNILLVQFANLYRTASSAMAS-NQTTPKPKTP 494
Query: 180 FDANWKTHSLPSQKKKSSPNDV-ISDVEDSNESQNMGTTYRPTLSSE 225
A+ PSQ K+ P V SD +E G + LSS+
Sbjct: 495 AKAD-SGKKTPSQSKRDDPATVSYSDGSSEDEDSLFGRLFEDILSSD 540
>SB_51123| Best HMM Match : PDZ (HMM E-Value=3.8e-18)
Length = 182
Score = 35.9 bits (79), Expect = 0.097
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 89 VDHVEMEGPAALAG-MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCVR 147
+ V +G AA G + GD IL +N D+ A H ++A+ + +R+ V+ ++
Sbjct: 56 IHEVYEDGAAAKDGRLWAGDQILEVNNCDLREATHDMAINALRQTPAIVRLRVLRDESQY 115
Query: 148 KVELHLKYINLQ 159
K E +Y+N++
Sbjct: 116 KDEDAFEYLNVE 127
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 35.9 bits (79), Expect = 0.097
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 88 YVDHV-EMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
+V HV E A L ++ GD IL ++G D+ A H V+ I S +R VV
Sbjct: 1321 HVRHVLENSSVARLGELKAGDQILEVDGHDLRNASHEEAVEVIRRARSPVRFVV 1374
Score = 31.1 bits (67), Expect = 2.7
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 92 VEMEGPAALAGM-REGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
V EGP G+ + GD ++ +NG+ V H +V I S R+VV
Sbjct: 833 VNPEGPVGKNGIIQSGDHLIEVNGVGVLDLGHNEVVTLIQSLPMEFRLVV 882
>SB_52290| Best HMM Match : PDZ (HMM E-Value=8.6e-18)
Length = 124
Score = 35.1 bits (77), Expect = 0.17
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 88 YVDHVEMEGPAALAG-MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVV 140
Y+ + G AAL G ++ DVIL +NG ++R + + + +C +R++V
Sbjct: 34 YIKRLVPGGSAALCGQLQVNDVILQVNGKSLDRLTYREALSILRNCPPEVRLLV 87
>SB_11669| Best HMM Match : PDZ (HMM E-Value=6.4e-15)
Length = 85
Score = 34.7 bits (76), Expect = 0.22
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 73 YGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSC 132
+G K ++ I V + G A G+R D ILSINGM E H ++I
Sbjct: 16 WGFRLKGGKDFGQIPTVSQLTPGGKAITNGLRVEDQILSINGMGCEDMTHMEAQESIKRT 75
Query: 133 DSRMRMVV 140
+ +R+ V
Sbjct: 76 GNALRLQV 83
>SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05)
Length = 84
Score = 33.9 bits (74), Expect = 0.39
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 88 YVDHVEMEGPAALAG-MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCV 146
++ + +G A G ++ GD +LSIN D++ A+H V+ + S S + ++V + +
Sbjct: 3 FISKIAKDGTAERDGRLKVGDKVLSINSRDMKNAKHDDAVNMLTSGPSFVTLIVYRDRVI 62
Query: 147 RK 148
K
Sbjct: 63 NK 64
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 33.5 bits (73), Expect = 0.52
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 41 ERSGGAKNEEDWRR--RTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPA 98
+++ ++D+ R R +++ K N GF + +E E I ++ + G A
Sbjct: 168 KKTPAVPEDDDFTREERKVVLHKGNTGLGFNIVG-------GEENEGI-FISFILAGGVA 219
Query: 99 ALAG-MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFE-DCVRKVELHLKYI 156
L+G +R GD I ++N +D+ A H A+ S + + ++ + + E + ++
Sbjct: 220 DLSGELRRGDQIKAVNDVDLTNATHEQAAAALKGAGSTVTITAQYKPEEYNQFETKIHHL 279
Query: 157 NLQRTLQSKMRELEQL--SIRERQLFDAN-WKTHSLPSQKKKSSPNDVISDVEDSNE 210
+ + S + + + R LFD + K LPSQ D++ S++
Sbjct: 280 REKMMVTSNQGVVTSVKRQLYVRALFDYDKTKDSGLPSQGLSFKYGDILHVTNASDD 336
>SB_53163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 33.1 bits (72), Expect = 0.68
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 160 RTLQSKMRELEQLSIRERQLF--DANWKTHSLPSQKKKSSPNDVISDVEDSNES 211
R LQ K+R+LE+ + ++ D LPSQ+K+S +D + +++ N+S
Sbjct: 53 RELQVKLRQLEKEKAKGEEMLKTDILQLKQQLPSQEKESQNSDYLRQLQEENQS 106
>SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 33.1 bits (72), Expect = 0.68
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 334 PCCDPHC-VPHTRKKVRRKKEC-SKDHKRREKYQVDKSTQKPDNVPPPRMKKVCSSGHCS 391
PCC C R K +C K + KS +PDN + ++VCS G C+
Sbjct: 483 PCCGRDCRYVGNDISCRNKTDCLDKAMCSGSSVECPKSVYQPDNTVCDKGRRVCSVGECA 542
Query: 392 RYRYLTTESTQTSQCS 407
+ T + + QC+
Sbjct: 543 K-SICTKYALEECQCT 557
>SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 32.7 bits (71), Expect = 0.90
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 57 IIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAG-MREGDVILSINGM 115
I +E+ GF++ + + + + Y+ V G AA G ++ D ILS+NG
Sbjct: 162 ITLERGGSGLGFSIAGGTDNPHVDDDFGI--YITKVIPGGAAAQDGRLQVNDCILSVNGT 219
Query: 116 DVERAEHAAIVDAINSCDSRMRM 138
+ EH VDA+ + S++ +
Sbjct: 220 NTVDIEHQQAVDALKAAGSQVTL 242
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 32.3 bits (70), Expect = 1.2
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 8 ERCSSVLGNGKKLLANDSKEDSLDNSIRESFKSERSGGAKNEEDWRRRTIIVEKKNGSYG 67
E+ V+ G+K + ++++ + +++E + + K EE+ +++ E+ G
Sbjct: 241 EQNQEVIEGGEKTIEKNTEQSVVVEAVQEKAVTSDANKDKQEEESNVQSLSEEQTAQPEG 300
Query: 68 FTLQSYGIHYKKEQE----IEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEHA 123
+ I +E+ + ++ + E AALA E L +NG+DV+R
Sbjct: 301 EKVAKEEIGESEEKANGPALPLLDLPKTISSEELAALASSDENIESLGVNGLDVDRVSEG 360
Query: 124 A 124
A
Sbjct: 361 A 361
>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1772
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 74 GIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVDAINSCD 133
G+ + E + Y+ V+ A+ AG++ GD I+ +NG HA+ + A+ +
Sbjct: 1321 GLKIRGGAEYGLGIYIAGVDEHSAASRAGLKCGDQIMDVNGTSFLNISHASAIKALKANK 1380
Query: 134 SRM 136
+ M
Sbjct: 1381 NMM 1383
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 511 YQQHHEKHVHRQSANTQHYSVYTRSHSHYQPTKSTESLIVVPKYQLESSGSESRLACECT 570
+ HH+ H H + H+ Y H Y + + LI L + + S L +
Sbjct: 923 HHHHHQHHGHYRRRRHYHHPYYPYYHQPYHHHQYHQLLI---SSSLSTPSTSSSLLASTS 979
Query: 571 DSIEYYRRITTSKNPG 586
+I Y T K PG
Sbjct: 980 PTINYLSVGTVEKGPG 995
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Query: 287 RASEIYKSTNSKHSKMHRSNHSHSCA----PCMPVYNNPDANSLEAYDLASPCCDPHCVP 342
R+ +NS+ K RS SH+ P +Y + + S E L SP P
Sbjct: 251 RSKHSRSRSNSRDQKRSRSRRSHTPPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRGQS 310
Query: 343 HTRKKVRRKKECSKDHKRREKYQVDKSTQKPD 374
+ +RK + +RR + + +S ++ D
Sbjct: 311 SRERNTKRKSKSPSLERRRSRARRSRSIERRD 342
Score = 29.9 bits (64), Expect = 6.3
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 339 HCVPHTRKKVRRKKECSKDHKRREKYQVDKSTQKPDNVPPPRMKKVCSSG 388
H +KK +++K+ KD K + K + + S KPD + P KK+ G
Sbjct: 164 HSKDKKKKKHKKEKKREKD-KHKHKQEKESSDDKPDELSTP--KKISEKG 210
>SB_40268| Best HMM Match : NO_synthase (HMM E-Value=0)
Length = 465
Score = 31.5 bits (68), Expect = 2.1
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 58 IVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDV 117
+V++K G GF + K+ + D V+ ++ ++ GD+IL +NG +
Sbjct: 10 LVKRKVGGLGFLV-------KERASKPCVEISDIVKGSAAEGVSNLQPGDIILEVNGKSI 62
Query: 118 ERAEHAAIVDAINSCDSRMRMVVIFEDCVR 147
E + VD ++ ++ + + + VR
Sbjct: 63 EESHFKDAVDVLSGVETGSSVSLKIKPSVR 92
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 31.5 bits (68), Expect = 2.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 88 YVDHVEMEGPAALAGMRE-GDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVI 141
+V +V P+A G+ E GD ++ ING++ E H +D I S ++ + ++
Sbjct: 171 FVRNVIPGSPSAEGGVLERGDEVVGINGVNTEDMTHQQAMDLIKSSPGKIDLKIV 225
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 31.1 bits (67), Expect = 2.7
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 120 AEHAAIVD--AINSCDSRMRMVVIFEDCVRKVE-LHLKYINLQRTLQSKMRELEQLSIRE 176
+EH A +D A N D++ R+ + ++ RK+E K+ LQ L +ELE+ R+
Sbjct: 514 SEHEATMDFAADNLADAQARLDLRTKEENRKIEEAKEKFAELQTRLAKSAKELEEELERK 573
Query: 177 RQLFDANWKTHSLPSQKKKSSPNDVISDVE 206
R+ ++ KKK + S++E
Sbjct: 574 REDYNTAADERRYQMAKKKDTLQATRSELE 603
>SB_19067| Best HMM Match : PDZ (HMM E-Value=1.6e-12)
Length = 217
Score = 31.1 bits (67), Expect = 2.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 88 YVDHVEMEGPAALAGMREGDVILSING 114
+V V + PAAL G+R GD IL I+G
Sbjct: 67 FVAFVHKDSPAALGGLRFGDQILQIDG 93
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 31.1 bits (67), Expect = 2.7
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
Query: 103 MREGDVILSINGMDVERAEHAAIVDAINSCDSRMRMVVIFEDCVRKVELHLKYINLQRTL 162
++ GD ILSI+G V A D I + D RKV LH+K N Q+
Sbjct: 546 LKPGDKILSIDGQSVTNVLQAQAHDLIRAAD-------------RKVCLHIKEANAQKVR 592
Query: 163 QSKMRELEQLSI 174
QS + L S+
Sbjct: 593 QSVVNHLSGRSV 604
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 30.7 bits (66), Expect = 3.6
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 11/49 (22%)
Query: 515 HEKHVHRQSANTQHYSV-----------YTRSHSHYQPTKSTESLIVVP 552
H H H A TQHY++ TRSHS +Q T T +L V P
Sbjct: 71 HTLHYHTHVATTQHYNITLTTRHYTITLMTRSHSRHQHTYYTTTLTVRP 119
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 30.7 bits (66), Expect = 3.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 22 ANDSKEDSLDNSIRESFKSERSGGAKNEEDWRRRTIIVEKKNGSYGFTLQ 71
+ D K+ +++ R SE+ G N +D + + I EKK G T++
Sbjct: 883 STDIKDHAVEKETRRKVDSEKEVGKANHDDAKPKVIPKEKKKNGNGTTMK 932
Score = 29.9 bits (64), Expect = 6.3
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 24 DSKEDSLDNSIRESFKSERSGGAKNEEDWRRRTIIVEKKNGSYGFTLQ---SYGIHYKK- 79
D K+ +++ R SE+ G N +D + + I EKK G T S G+ K
Sbjct: 778 DIKDHTVEKGTRGKVDSEKEVGKSNHDDAKTKVIPKEKKKNGNGTTTMKEASEGVSNKHV 837
Query: 80 EQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIVD 127
IE ++ + + + G + I S+ D +R + + D
Sbjct: 838 PHSIEPTKNINTSKNDPDLSSKGSTSKNKISSVRNGDHDRLVNVSSTD 885
>SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 30.7 bits (66), Expect = 3.6
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 160 RTLQSKMRELEQLSIRERQLF--DANWKTHSLPSQKKKSSPNDVISDVEDSNES 211
R LQ K+R+LE+ + ++ D L SQ+K+S +D + +++ N+S
Sbjct: 102 RELQGKLRQLEKEKAKGEEMLKTDILQLKQQLSSQEKESQNSDYLRQLQEENQS 155
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 30.3 bits (65), Expect = 4.8
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 510 EYQQHHEKHVHRQSANTQHYSVYTRSHSHY 539
++ QHH H H+ + + H++ + H HY
Sbjct: 212 QHHQHHHHHHHQHNHHHHHHNHHHHHHHHY 241
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 30.3 bits (65), Expect = 4.8
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 41 ERSGGAKNEEDWRRRTIIVEKKNGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAAL 100
+R G +E+D ++ GFT+ + + ++ Y+ +V G AA
Sbjct: 501 KRRGSVDSEKDVLTVVLVKGMAGKGLGFTI----VGGRGSPRGDLPIYIKNVLPGGAAAA 556
Query: 101 AG-MREGDVILSINGMDVERAEHAAIVD 127
G +R G +LS+NG D+ H +D
Sbjct: 557 DGRLRRGYEVLSVNGTDMTSVTHREALD 584
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 30.3 bits (65), Expect = 4.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 511 YQQHHEKHVHRQSANTQHYSVYTRSHSHYQPTKSTESLI 549
+Q+H +H HR + H+ Y R H ++ T +I
Sbjct: 326 HQRHRHRHRHRHRHHHHHHHEYNRRHRYFTDINITIQII 364
>SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33)
Length = 644
Score = 29.9 bits (64), Expect = 6.3
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 284 DCYRASEIYKSTN--SKHSKMHRSNHSHSCAPCMPVYNNP 321
DC ++KS KH K H N H C C + P
Sbjct: 327 DCRVCERVFKSHELLEKHIKNHAENRPHKCPQCPKGFKQP 366
>SB_10935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 29.9 bits (64), Expect = 6.3
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 345 RKKVRRKKECS-KDHKRREKYQVDKSTQKPDNVPPPRMKKVCSSGHCSRYRYLTTESTQT 403
R K +RKK S K+ K ++K K + + P P K S +TTE T T
Sbjct: 192 RTKHKRKKNSSLKEAKNQQKNTSSKKPIQKSSAPVPTSKATDGSSTTDDKLSMTTEETMT 251
Query: 404 SQCSLQSYATSNATV 418
L + ++T+
Sbjct: 252 VDEKLINETDQSSTI 266
>SB_42888| Best HMM Match : EGF (HMM E-Value=8.4e-20)
Length = 167
Score = 29.9 bits (64), Expect = 6.3
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 333 SPCCDPHCVPHTRKKVRRKKECSKDHKRREKYQVDKSTQKPDNVPPPRMKKVCSSGHCS- 391
SP +PHC+PH K R E + + + + D C GHC+
Sbjct: 87 SPIVEPHCLPHPCKNGGRCIERQYGYDCQCDVRYTGPHCEVDRCADCDANAECCDGHCTC 146
Query: 392 RYRYLTT 398
RY Y+ T
Sbjct: 147 RYGYVGT 153
>SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 29.5 bits (63), Expect = 8.4
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 95 EGPAALAG-MREGDVILSINGMDVERAEHAAIVDAI 129
+GPA +G +R GD+ILS+N +D+ + I+ AI
Sbjct: 237 DGPALKSGELRIGDLILSLNKLDLNSSNMNTILAAI 272
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 29.5 bits (63), Expect = 8.4
Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 9/110 (8%)
Query: 293 KSTNSKHSKMHRSNHSHSCAPCMPVYNNPD--ANSLEAYDLASPCCDPHCVPHTRKKVRR 350
KS +H K+H + C C +N A+ L + P C + V
Sbjct: 459 KSNLDQHLKLHTGERPYQCTQCEKGFNAKSHLADHLRTHSQDRPFACNECEKKFKHPVSL 518
Query: 351 KKECSKDHKRREKY---QVDKSTQKPDNVPPPRMKKVCSSGH----CSRY 393
K H Y Q DK + D + R+K + H C +Y
Sbjct: 519 NKHVRGVHSLERPYKCDQCDKKFVRKDYLSTHRLKHSKAKTHYCAICDKY 568
>SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 29.5 bits (63), Expect = 8.4
Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 291 IYKSTNSKHSKMHRSNHSHSCAPCMPVYNNPDANSLEAYDLAS---PCCDPHCVPHTRKK 347
+ K ++ KM R + PV D ++ +D PCCD K
Sbjct: 122 VEKDVSAYVEKMARMRILDDSSEGAPVLTEDDHFMVKRWDFIENNDPCCDSKSTKKPSKS 181
Query: 348 VRRKKECSKDHKRREKYQVDKSTQKPDNVPPPRMKK 383
+K E +K K + DK + P +KK
Sbjct: 182 -SKKSEIAKSEKHKSAKSHDKKDKSPKRHEEKHVKK 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.126 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,417,059
Number of Sequences: 59808
Number of extensions: 915600
Number of successful extensions: 2605
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2528
Number of HSP's gapped (non-prelim): 98
length of query: 619
length of database: 16,821,457
effective HSP length: 86
effective length of query: 533
effective length of database: 11,677,969
effective search space: 6224357477
effective search space used: 6224357477
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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