Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000690-TA|BGIBMGA000690-PA|IPR001478|PDZ/DHR/GLGF
(619 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 31 0.12
AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA methy... 29 0.37
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 27 1.1
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 27 1.5
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 26 3.4
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 26 3.4
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 26 3.4
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 5.9
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 7.9
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 25 7.9
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 30.7 bits (66), Expect = 0.12
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 511 YQQHHEKHVHRQSANTQHYSVYTRSHS--HYQP 541
+ QHH +H H H SV+ +H HYQP
Sbjct: 118 HHQHHHQHPHLPHVQQHHPSVHHPAHHPLHYQP 150
Score = 24.6 bits (51), Expect = 7.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 439 DNDRSETKSSPKIQYQSSHQHVKPKSWDN 467
++D+ T+ SP I Q Q P W N
Sbjct: 484 EDDKDSTRESPAIVEQHHQQQQYPIIWSN 512
>AF532982-1|AAQ10289.1| 459|Anopheles gambiae putative RNA
methylase protein.
Length = 459
Score = 29.1 bits (62), Expect = 0.37
Identities = 10/38 (26%), Positives = 23/38 (60%)
Query: 63 NGSYGFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAAL 100
N S+ T+++Y H+ + +++ I + ++ +EGP L
Sbjct: 107 NKSFKITVETYNKHFSQREKVAKIETMQYLPVEGPVNL 144
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 27.5 bits (58), Expect = 1.1
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 512 QQHHEKHVHRQSANTQHYSVYTRSHSHYQPTKSTESLIVVPKYQLESS 559
QQ ++H H Q Q + SH H+ P + L +Y E S
Sbjct: 305 QQQQQQHHHHQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELS 352
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 27.1 bits (57), Expect = 1.5
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 11/106 (10%)
Query: 510 EYQQHHEKHVHRQSANTQHYSVYT------RSHSHYQP----TKSTESLIVVPKYQ-LES 558
+ QHH H H N + V T RSHS P +S L V Y +
Sbjct: 651 QQHQHHHHHHHHHHQNPNDHFVNTNTDTIKRSHSAQLPQREDARSRTPLTAVSDYSPATA 710
Query: 559 SGSESRLACECTDSIEYYRRITTSKNPGEPQSANYYTPHFVYPSHS 604
+ + + A + + + Y TT+ P + TP PS++
Sbjct: 711 AAAAAAAAAKERELLMYETSSTTTTLTPPPSESGRETPLLSGPSYA 756
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 25.8 bits (54), Expect = 3.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 510 EYQQHHEKHVHRQSANTQHYS 530
+ QHH+ H H+ + QH+S
Sbjct: 645 QQHQHHQAHQHQGQHHAQHHS 665
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 510 EYQQHHEKHVHRQSANTQHYSVYTRSHSHYQ-PTKSTESLIVVPKYQLES 558
+ QQHH H+ +Q ++Y+R+ S P+ +T + Y ++S
Sbjct: 781 QQQQHHHHHLQQQQQIVGKNTLYSRNSSERMLPSGATGNNSTNSAYSMQS 830
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 25.8 bits (54), Expect = 3.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 385 CSSGHCSRYRYLTTESTQTSQCSLQSYATSNA 416
CS GHC+ Y +T E + + + T++A
Sbjct: 213 CSIGHCTLYTRMTIEMVEQLESMASAERTASA 244
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 514 HHEKHVHRQSANTQHYSVYTRSHSHYQPTKSTESLIVVPKYQ 555
+ + H HR T + T + + QP + SL+ P+ Q
Sbjct: 54 YSQVHHHRAQDPTPQQYIQTDQYQYAQPQRQHPSLVAGPQQQ 95
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.6 bits (51), Expect = 7.9
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 22 ANDSKEDSLDNSIRESFKSERSGGAKNEEDWRRRTIIVEKKNGSYGFTLQSYGIHYKKEQ 81
A +SKE +L NS+ + K + + A NE R++T+ LQ KKE
Sbjct: 370 AKESKESTLKNSLDKFAKVQANMRATNER--RKKTLEQIAAEEKRLLELQDVPKKNKKEI 427
Query: 82 E-----IEVIT-YVDHVEMEGPAALAGMREGDVIL--SINGMDVERAEHAAIVD----AI 129
E IE +T VE + A LA +++ +L + E E VD A+
Sbjct: 428 EESEAKIESLTRQKTEVEAKLTANLATLKDETKVLLEEKEKLQTELIELKRAVDESKSAL 487
Query: 130 NSCDSRMRMVVIFEDCV-RKVE-LHLKYINLQRTLQSKMRELEQL 172
+ +S +++ E RK+E L Y ++ L+ K L+ L
Sbjct: 488 SIAESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTL 532
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 24.6 bits (51), Expect = 7.9
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 67 GFTLQSYGIHYKKEQEIEVITYVDHVEMEGPAALAGMREGDVILSINGMDVERAEHAAIV 126
G + YG K ++ IT V + G AL R+GD + ++ +DV A ++A
Sbjct: 520 GLSDPQYGFR-KGRSTVDAITRVMN---NGKVALDKKRKGDRLCAVVTVDVRNALNSANW 575
Query: 127 DAINSCDSRMRMVVIFEDCVR 147
AI R F+ +R
Sbjct: 576 TAIGQALQRENTPPYFQALLR 596
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.313 0.126 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,343
Number of Sequences: 2123
Number of extensions: 25832
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 13
length of query: 619
length of database: 516,269
effective HSP length: 68
effective length of query: 551
effective length of database: 371,905
effective search space: 204919655
effective search space used: 204919655
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -