GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000689-TA|BGIBMGA000689-PA|IPR001382|Glycoside
hydrolase, family 47, IPR003137|Protease-associated PA
         (822 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   2.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   2.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   2.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   2.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   2.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   2.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   2.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   2.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   2.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   4.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   4.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   4.8  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 73  STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 112


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)

Query: 485 STAARPPARLRPLNDPRQINALSDMG----ISVLTLPDGR 520
           ST   PP    PL+ P   NA    G    +SV T P G+
Sbjct: 117 STNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 117 YNNELLTMAEDLGKRVLPA 135
           YNN+LLT  +D   + +PA
Sbjct: 332 YNNQLLTRLDDNWNKYIPA 350


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 117 YNNELLTMAEDLGKRVLPA 135
           YNN+LLT  +D   + +PA
Sbjct: 332 YNNQLLTRLDDNWNKYIPA 350


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 117 YNNELLTMAEDLGKRVLPA 135
           YNN+LLT  +D   + +PA
Sbjct: 332 YNNQLLTRLDDNWNKYIPA 350


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,726
Number of Sequences: 317
Number of extensions: 8174
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 12
length of query: 822
length of database: 114,650
effective HSP length: 62
effective length of query: 760
effective length of database: 94,996
effective search space: 72196960
effective search space used: 72196960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)