Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000689-TA|BGIBMGA000689-PA|IPR001382|Glycoside
hydrolase, family 47, IPR003137|Protease-associated PA
(822 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 318 1e-87
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 89 3e-18
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 36 0.023
SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like factor|Schizosacchar... 31 0.49
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 30 1.5
SPBC1718.02 |hop1||linear element associated protein Hop1|Schizo... 29 2.6
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 28 4.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 8.0
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 318 bits (782), Expect = 1e-87
Identities = 169/445 (37%), Positives = 256/445 (57%), Gaps = 10/445 (2%)
Query: 1 MFYHAYHAYMENAYPADELMPLSCKGRWKGI-TPSRGDMDDALGNFXXXXXXXXXXXXXM 59
+FYH Y+ YM+ A+P DEL PLSC+G P+ ++D G++ +
Sbjct: 42 LFYHGYNNYMQFAFPNDELAPLSCEGLGPDYENPNNIGVNDVRGDYLLTLVDVLDTLVVL 101
Query: 60 GDFSEFNHAIQLVIKDVSFDQDIVVSVFETNIRMLGGLLSAHVLAETLKS--DIPLLQWY 117
GD F A+ VI ++F++D V VFE IR+LGGLLS+H+ A K IPL Y
Sbjct: 102 GDREGFQDAVDKVIHHINFERDTKVQVFEATIRILGGLLSSHIFASEEKYGFQIPL---Y 158
Query: 118 NNELLTMAEDLGKRVLPAFNTSTGIPHGKINLRHGIRDLTESRETCTACAGTMILEMAAL 177
ELLT+A +L +R+LPAF T TGIP +INL G+ E E C A A +++LE + L
Sbjct: 159 KGELLTLATELAERLLPAFRTPTGIPFARINLMKGVA-YREVTENCAAAASSLVLEFSML 217
Query: 178 TRLTGNPIYEQKAHKSMDRLWKIRHRTSDLMGTVINIHSGDWVRKDSGVGAGIDSYYEYC 237
T LTGN ++ A + +WK R L+G I++ SG W+ SGVGAGIDS+YEY
Sbjct: 218 TALTGNNKFKASAENAFFSVWK-RRSGIGLLGNSIDVLSGRWIYPVSGVGAGIDSFYEYA 276
Query: 238 LKAYILLGDEKYLARFTRHYNAIMKYISRGPVMLAVHMHRPH-LQSRNFMDALLAFWPGL 296
K+YI LGD +YL + + ++ Y + +++ + + ++D+L A++PGL
Sbjct: 277 FKSYIFLGDPRYLEVWQKSLESLRHYTASLNEYYYQNVYSANGMVMSRWVDSLSAYFPGL 336
Query: 297 QVLLGDVRPAVETHEMLYQVMQRHTFIPEAFTSDFQ-VHWGQHPLRPEFLESTYFLHRAT 355
VL G++ A + H + + + +PE + + + +PLRPEF ESTY+L+RAT
Sbjct: 337 LVLAGELELAKKMHLYYFSIYLKFGQLPERYNLYTKSIELNGYPLRPEFAESTYYLYRAT 396
Query: 356 EDDHYLQVGKTVLKALQQHTRVPCGYASVNDVRTRAHEDRMDSFVLAETFKYLYMLFGDE 415
+D YL VG+ +L ++ H PCG+A+V ++ +RM+SF L+ET KYL++LF D+
Sbjct: 397 KDVFYLHVGELLLSNIENHLWTPCGFAAVENLEKYTLSNRMESFFLSETLKYLFLLFDDD 456
Query: 416 KDFPIKLEDYVLTTEAHFLPLSLAT 440
D++ TTE H P++ T
Sbjct: 457 NPIHRSHHDFIFTTEGHLFPVTNQT 481
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 616 IAKRGHCTFAQKVRNMQKAGVKLAIIID----NIPDSTHETTALF 656
IA G+C++ Q+ +N KAG+ L +I D N ++ H +LF
Sbjct: 688 IAPLGNCSWVQQAKNTNKAGL-LILITDGEFINPLENIHSQNSLF 731
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 88.6 bits (210), Expect = 3e-18
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 17/211 (8%)
Query: 59 MGDFSEFNHAIQLVIKDVSFDQDIV-VSVFETNIRMLGGLLSAHVLAETLKSDIPLLQWY 117
MG + A + V ++++QD VSVFET IR+LGGLLS++ L++
Sbjct: 100 MGLDEQVLRAREWVNNSLTWNQDDEEVSVFETTIRILGGLLSSYHLSQ------------ 147
Query: 118 NNELLTMAEDLGKRVLPAFNTSTGIPHGKINL-RHGIRDLTESRETCTACAGTMILEMAA 176
+ L A DL R+L A+NTSTG+P +NL R T TA +GT+ +E+
Sbjct: 148 DKLYLDRAVDLADRLLAAYNTSTGLPRSNVNLGTRKSRKRTREYFVSTAESGTVQMELRY 207
Query: 177 LTRLTGNPIYEQKAHKSMD-RLWKIRHRTSDLMGTVINIHSGDWVRKDSGVGAGIDSYYE 235
L+ LTG+P Y A K+M+ L + L+ +N+ +G +V ++ +G+ DSYYE
Sbjct: 208 LSYLTGDPKYWITADKTMEVLLGDATWSHTGLVPITVNLITGAYVGRNIRLGSHGDSYYE 267
Query: 236 YCLKAYILL--GDEKYLARFTRHYNAIMKYI 264
Y LK + L Y F + I++Y+
Sbjct: 268 YLLKQDLQLFSSGTVYRKAFDLSVDGIIEYL 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 337 QHPL-RPEFLESTYFLHRATEDDHYLQVGKTVLKALQQHTRVPCGYA-----SVNDVRTR 390
QH L RPE +ES + L+R T D+ Y + G + + +++R+P A SV + +
Sbjct: 407 QHNLMRPETVESLFILYRITRDEIYREWGWNIFVSFLRYSRLPGRDAFTCLDSVESKKVK 466
Query: 391 AHEDRMDSFVLAETFKYLYMLFGDEKDFPI-KLEDYVLTTEAHFLP 435
D+ +SF AET KYLY+LF E DF I L +Y TEAH P
Sbjct: 467 DQRDKTESFWFAETLKYLYLLF--EDDFSILPLTNYTFNTEAHPFP 510
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 605 ENEEEISNGFGIAKRGHCTFAQKVRNMQKAGVKLAIIIDNIPDSTHETTALFAMSGDGND 664
E+++E F + +RG CT+ K Q+ G K I+ DN S+ + A
Sbjct: 135 ESKDEAILDFLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDES 194
Query: 665 DIEIPAVFL 673
+ IP++F+
Sbjct: 195 KVHIPSLFV 203
>SPCC24B10.14c |xlf1|nej1, mug104|xrcc4 like
factor|Schizosaccharomyces pombe|chr 3|||Manual
Length = 203
Score = 31.5 bits (68), Expect = 0.49
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 693 VTVGELKNLKKHYDNSCDEGGCEAVVDSQNLPADK-ESFDHLKKVLSQLV------AQFE 745
V V + +L + + +C +S+ P D ++F+ L VL++++ ++ +
Sbjct: 26 VQVIHITDLVRVWSCTCSRNQIVNQAESERCPIDPFQTFETLVDVLAEVLVNVSSESRIQ 85
Query: 746 LSLSNEEGNTQNSCAEEIAESIHLE 770
L SN+EG+ + C +IA+ I LE
Sbjct: 86 LRGSNDEGSLKIFCTSKIAKDIFLE 110
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Query: 702 KKHYDNSCDEGGCEAVVDSQNLPADKESFDHLKKVLSQLVAQFELSLSNEEGNTQNSCAE 761
KK E + V + N+P DK+S D L++ ++ E S S +E E
Sbjct: 4 KKSAAKKAREALVQKKVINSNVPTDKKSIDQLQENVTSKSHLLEESSSEDEEINSFQINE 63
Query: 762 EIAESI-HLEKGEFVHNVARKTSSVKTIQQSVTIEPVGPSEVAPKESVQDTGE 813
E A+ H +K E + + K Q + ++ G E + +E GE
Sbjct: 64 EYAKRFEHNKKREELQKLEAKYGE----QMANGVDGEGSDESSSEEEEDSDGE 112
>SPBC1718.02 |hop1||linear element associated protein
Hop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 29.1 bits (62), Expect = 2.6
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 675 SKEGEYLSNALKNNPELTVTVGELKNLKKHYD--NSCDEGGCEAV---VDSQNLPADKES 729
+K G +L+ + + GE K++ Y+ N C + ++ + +KES
Sbjct: 183 TKAGVFLNTVETKDCMSWLNRGEFKDIVSFYESNNGIAISHCSHAFVPISTEKIMINKES 242
Query: 730 --FDHLKKVLSQLVAQFELSLSNEEGNTQNSCAEEIAESIHLEKGEFVHNVARKTSSVK 786
FD +K+ SQL + +E G+TQ + + +S+ K E + N +R +K
Sbjct: 243 SLFDSQEKIDSQLEKFLQPLKYDEIGSTQILDEQSVEKSLSQGKCEKMQNESRGLREIK 301
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 28.3 bits (60), Expect = 4.6
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 328 TSDFQVHWGQHPLRPEFLESTYFLHRATEDDHYLQVGKTVLKALQQHTR-VPCGYASVND 386
T +F G+ + ++ ST L R +HYL V + + K + QH R + GY S ND
Sbjct: 430 TKEFASWVGRTKKKNIYVIST--LKRPVPLEHYLWVKQNMFKIVDQHGRFLMDGYKSAND 487
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 8.0
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 80 QDIVVSVFETNIRMLGGLLSAHVLAETLKSDIPLLQWYNNELLTMAEDLGKRVLP-AFNT 138
QD +VS+ T+IRMLGG ++ L +D + +N + + + LG+ P +N
Sbjct: 270 QDYLVSLKITDIRMLGGKFGEEII-NLLGTD-SIKDVWNMSMDFLIDKLGQTNGPLVWNL 327
Query: 139 STGIPHGKINLRHGIRDLTESR 160
GI + +I + I+ + ++
Sbjct: 328 CHGIDNTEITTQVQIKSMLSAK 349
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,751,355
Number of Sequences: 5004
Number of extensions: 159776
Number of successful extensions: 424
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 409
Number of HSP's gapped (non-prelim): 10
length of query: 822
length of database: 2,362,478
effective HSP length: 79
effective length of query: 743
effective length of database: 1,967,162
effective search space: 1461601366
effective search space used: 1461601366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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