Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000688-TA|BGIBMGA000688-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004837|Sodium/calcium exchanger
membrane region
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0564 - 4176177-4178096 58 1e-08
11_01_0292 - 2200714-2201478,2202691-2203395 54 2e-07
11_06_0626 - 25620409-25620706,25620814-25620943,25621034-256212... 52 7e-07
03_05_0545 + 25419031-25420758 49 6e-06
10_08_0133 + 15100049-15101836,15103344-15103382 48 1e-05
12_02_1175 + 26702744-26704507 40 0.005
02_05_0116 - 25976234-25976394,25976485-25976701,25977345-259774... 35 0.11
03_01_0176 - 1416316-1416405,1416705-1416761,1416885-1417010,141... 33 0.58
02_05_0396 - 28600855-28601475,28601579-28601761,28601970-286021... 31 1.8
10_08_0854 + 21086253-21086258,21086320-21086480,21087065-210871... 30 3.1
04_04_1408 + 33349232-33349450,33349715-33349782,33349853-333498... 30 4.1
11_01_0566 + 4466318-4466695,4466736-4466909,4466941-4467038,446... 29 9.4
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295... 29 9.4
06_03_1386 + 29816744-29816941,29817030-29817330,29817421-298175... 29 9.4
>03_01_0564 - 4176177-4178096
Length = 639
Score = 58.4 bits (135), Expect = 1e-08
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 92 CFLALYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFV 151
C AL F +LG+ DYF ++E + L + +AG T + + +P++F +
Sbjct: 137 CLAAL--FYMLGNTAADYFCCSLEKMSALLRLPPTVAGVTLLPFGNGAPDVFASIAAFMG 194
Query: 152 T-EGDLGVGAVVGSAVF-NVLAVPACCALFAGAVIELDWWSVTRDCMMYXXXXXXLILTL 209
T GD+G+ +V+G AVF + V A A +++D RD + L + L
Sbjct: 195 TGAGDVGLNSVLGGAVFVTCVVVGAVSLCVAEKNVQIDRRCFVRDVGFFLMTLVALSIIL 254
Query: 210 LDDKIYWHEALLLVLMYTFY 229
+ K+ A++ V +Y Y
Sbjct: 255 IVGKVTVWGAIMFVSIYVVY 274
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 319 FIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSV-LVTKQGHG 377
F+M I W ++ + ++ G L + SI GLT+LA G S+ + +S+V L G G
Sbjct: 478 FVMSIIWFYIIANELVALLVAFGVILGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDG 537
Query: 378 T-MGISNSIGSNTFDILLCLGLPWLV 402
+ +S F+ L LG+ L+
Sbjct: 538 VQIAMSGCYAGPMFNTLAGLGISMLL 563
>11_01_0292 - 2200714-2201478,2202691-2203395
Length = 489
Score = 54.0 bits (124), Expect = 2e-07
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 94 LALYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVTE 153
L L F +L + +F PA+ + RL ++ +A T +A + +P+ F +
Sbjct: 45 LLLLHFRVLAAAAGTHFSPAVSRLAARLRLSPSMAAVTLLALGNGAPDAFASAAALGGAG 104
Query: 154 G--DLGVGAVVGSAVFNVLAVPACCALFAGAVIELDWWSVTRDCMMYXXXXXXLILTLLD 211
G G+ A++ + F V AL A A + S RD Y L L
Sbjct: 105 GMRRAGLAAILSAGAFVSAFVVGAVALIA-APFAVPPASFARDVFFYLLAASGLFYIYLS 163
Query: 212 DKIYWHEALLLVLMYTFYI 230
+IY +A+ LVL Y F++
Sbjct: 164 AEIYLWQAIGLVLFYVFFV 182
Score = 53.2 bits (122), Expect = 4e-07
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 317 LTFIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGH 376
++F+M + WI +++ + + +G ++ P +I G+T+LA G S+ + V+ V + K G
Sbjct: 334 ISFVMSVFWISTMAGELLNCLAAIGVIMDFPPAILGMTVLAWGNSVGDLVADVALAKSGQ 393
Query: 377 GTMGISNSIGSNTFDILLCLGLPWLVKSL-FYP 408
T+ I+ F++L+ LG ++++ YP
Sbjct: 394 PTIAIAGCFAGPMFNMLVGLGTALVIQTARVYP 426
>11_06_0626 -
25620409-25620706,25620814-25620943,25621034-25621250,
25621894-25622015,25622119-25622267,25622642-25622759,
25622840-25623185
Length = 459
Score = 52.4 bits (120), Expect = 7e-07
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 300 ILWATIPDCRHRHSIYPLTFIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAG 359
+L+A +P H + FI + +I ++Y V I + V + T LAAG
Sbjct: 275 MLFAFVPPYEIAHGW--IAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 332
Query: 360 TSLPEAVSS-VLVTKQGHGTMGISNSIGSNTFDILLCLGLPWLVKSLF 406
TS P+ V+S + +Q I+N SN+ +I + +G+PWLV +++
Sbjct: 333 TSWPDLVASKIAAERQITADSAITNITCSNSVNIYVGIGVPWLVDTMY 380
Score = 32.3 bits (70), Expect = 0.76
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 127 IAGATFMAAASSSPELFINCVGTF-----VTEGDLGVGAVVGSAVFNVLAVPACCALFAG 181
IA +A +S P++ + + +T G LG G +VGSA F++ + A C +
Sbjct: 83 IADVALLAFGTSFPQISLATIDAIRNLGQLTAGGLGPGTLVGSAAFDLFPIHAVCVVMPR 142
Query: 182 A 182
A
Sbjct: 143 A 143
>03_05_0545 + 25419031-25420758
Length = 575
Score = 49.2 bits (112), Expect = 6e-06
Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 16/224 (7%)
Query: 99 FLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVTE-GDLG 157
F LLG +YF ++E + L + IAG T ++ + +P++F + V + G +G
Sbjct: 128 FYLLGDTASEYFCASLEGLSAELRLPPAIAGVTLLSLGNGAPDVFASVVSFAAGDGGGVG 187
Query: 158 VGAVVGSAVFNVLAVPACCALFA-------GAVIELDWWSVTRDCMMYXXXXXXLILTLL 210
+ + +G A+F V AL A G V+EL + V C + L + +
Sbjct: 188 LNSALGGALFVSTVVAGVVALAAASRAGRGGVVVELRGF-VRDICFLLLALCSLLAILVT 246
Query: 211 DDKIYWHEALLLVLMYTFYILEKINPLDASQRMTPRSVQNGDLERGIEMTRRHDSTGSDI 270
W A V +Y Y+L S+ P DL + + D + +
Sbjct: 247 GTVTVWVSA-SFVSLYVAYVLLVWTSHCCSE---PGKPPQADLAAPLLLD--DDGGVTPL 300
Query: 271 STSSVWSFPGDKISFWKKLFWVLTWPIRLILWATIPD-CRHRHS 313
+ S S P K ++ L + P+ L TIPD HR S
Sbjct: 301 PSYSKNSAPSKKRAYLHCLLSAILIPLYLPRRLTIPDIAGHRWS 344
Score = 37.9 bits (84), Expect = 0.015
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 319 FIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQ---G 375
F+M + W +++ + ++ +G + V S+ G+T+LA G SL + VS+V + G
Sbjct: 412 FLMSVLWAYTLARELVALLVAIGYMVGVRASVLGVTVLAWGDSLGDLVSNVAMALHGGAG 471
Query: 376 HGTMGISNSIGSNTFDILLCLGL 398
+S F+ ++ LGL
Sbjct: 472 GAQTAVSGCYAGPLFNTVVGLGL 494
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 344 LNVPDSITGLTILAAGTSLPEAVSSVLVTKQGH-GTMGISNSIGSNTF 390
L +P +I G+T+L+ G P+ +SV+ G G +G+++++G F
Sbjct: 150 LRLPPAIAGVTLLSLGNGAPDVFASVVSFAAGDGGGVGLNSALGGALF 197
>10_08_0133 + 15100049-15101836,15103344-15103382
Length = 608
Score = 48.0 bits (109), Expect = 1e-05
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 306 PDCRHRHSIYPLTFIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEA 365
P H + F+M + W +V+ + ++ + V + GLT+LA G SL +
Sbjct: 427 PPADHLAAWLAAGFVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTVLAWGNSLGDL 486
Query: 366 VSSVLVTKQGHGTMG----ISNSIGSNTFDILLCLGLPWLVKS 404
V+++ V +G G G ++ G FD+L+ LG+ L+ S
Sbjct: 487 VANLAVASRGGGGGGAQVAVAGCYGGPVFDVLVGLGVSMLLSS 529
Score = 44.8 bits (101), Expect = 1e-04
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 82 QRQHGFILLHCFLALYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPE 141
+R G+ ++ +LA+ F LLG YF ++E + L ++ IAG T ++ + +P+
Sbjct: 114 RRVLGYAVMAAWLAVL-FYLLGDTAAVYFCSSLEGLSRLLRLSPAIAGVTLLSLGNGAPD 172
Query: 142 LFINCVGTFVT---EGD---LGVGAVVGSAVFNVLAVPACCALFAGA-VIELDWWSVTRD 194
++ + +F + EG+ +G+ V+GSA+ AV + GA + +D RD
Sbjct: 173 A-LSTIASFASGGGEGETTAVGLNGVLGSAMLVSSAVLGVIGVRLGARGVAVDRVDFYRD 231
Query: 195 CMMYXXXXXXLILTLLDDKIYWHEALLLVLMYTFYIL 231
+ + L ++ AL +Y Y++
Sbjct: 232 ASFLLAALAAVAVVLAAGEVTIWGALAFTSLYVVYVV 268
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 344 LNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGSN 388
L + +I G+T+L+ G P+A+S++ G G G + ++G N
Sbjct: 152 LRLSPAIAGVTLLSLGNGAPDALSTIASFASGGGE-GETTAVGLN 195
>12_02_1175 + 26702744-26704507
Length = 587
Score = 39.5 bits (88), Expect = 0.005
Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 25/252 (9%)
Query: 86 GFILLHCFLALYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFIN 145
G+ L +L L F LLG YF ++E + L + IAG T ++ + +P++ +
Sbjct: 110 GYAALALWL-LVLFYLLGDTASAYFCASLEGLSAVLRLPPAIAGVTLLSLGNGAPDVLSS 168
Query: 146 CV-------------GTFVTEGDLGVGAVVGSAVFNVLAVPACCALFA-----GAVIELD 187
V G GD+G+ V+G A+F V A+ A G + ++
Sbjct: 169 VVAFAAGARGGDGGGGGGEDAGDVGLSGVLGGALFVSTVVAGVVAIVAGRRGGGEPVIIE 228
Query: 188 WWSVTRDCMMYXXXXXXLILTLLDDKIYWHEALLLVLMYTFYILEKINP---LDASQRMT 244
RD L+ LL + A + +Y Y+L +AS +
Sbjct: 229 RRGFVRDVCFLLVALCYLLAVLLTGAVTVWSAASFLSLYAGYVLLVWTSHCCANASDELE 288
Query: 245 PRSVQ--NGDLERGIEMTRRHDSTGSDISTSSVWSFPGDKISFWKKLFWVLTWPIRLILW 302
+ DL + + D++ + SS +F ++L +L P+ L
Sbjct: 289 VDDTKQPTSDLAAPLLVVDDDDASPPPLPVSSSSKPTSAPRTFARRLVDLLHSPLYLPRR 348
Query: 303 ATIPD-CRHRHS 313
TIPD HR S
Sbjct: 349 LTIPDIAAHRWS 360
Score = 37.1 bits (82), Expect = 0.027
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 319 FIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSV-LVTKQGHG 377
F+M + W ++ + ++ +G V + G T+LA G SL + V+ V L T++G G
Sbjct: 426 FLMSVLWSYVLARELVALLVSIGVAAGVEAGVLGATVLAWGNSLGDLVADVALATRRGDG 485
Query: 378 TMGISNSI----GSNTFDILLCLGL 398
G ++ + F+ ++ LGL
Sbjct: 486 GAGAQTAVAGCYAAPAFNTVVGLGL 510
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 344 LNVPDSITGLTILAAGTSLPEAVSSVLVTKQG 375
L +P +I G+T+L+ G P+ +SSV+ G
Sbjct: 144 LRLPPAIAGVTLLSLGNGAPDVLSSVVAFAAG 175
>02_05_0116 -
25976234-25976394,25976485-25976701,25977345-25977466,
25977570-25977718,25978095-25978212,25978293-25978638
Length = 370
Score = 35.1 bits (77), Expect = 0.11
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 300 ILWATIPDCRHRHSIYPLTFIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAG 359
+L+A IP H + FI + +I ++Y V I + V + T LAAG
Sbjct: 275 MLFAFIPPYEIAHGW--IAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAG 332
Query: 360 TSLPEAVSSVLVTKQ 374
TS P+ V+S + ++
Sbjct: 333 TSWPDLVASKIAAER 347
Score = 32.3 bits (70), Expect = 0.76
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 127 IAGATFMAAASSSPELFINCVGTF-----VTEGDLGVGAVVGSAVFNVLAVPACCALFAG 181
IA +A +S P++ + + +T G LG G +VGSA F++ + A C +
Sbjct: 83 IADVALLAFGTSFPQISLATIDAIRNLGQLTAGGLGPGTLVGSAAFDLFPIHAVCVVMPR 142
Query: 182 A 182
A
Sbjct: 143 A 143
>03_01_0176 -
1416316-1416405,1416705-1416761,1416885-1417010,
1417944-1418150,1418235-1418714
Length = 319
Score = 32.7 bits (71), Expect = 0.58
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 328 SVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGS 387
+V Y AW + V G+T + P+S + LTI G S A+ + V QG G + ++ G+
Sbjct: 95 AVYYRFAWQMEV-GNTPS-PNSRSHLTITQFGNSFAAALKFLRVLDQGSGEIPVTEMFGT 152
Query: 388 NTFDILLCLGLP----WLVKSLFYPSTPENH 414
+ +G+ W ++L++ S H
Sbjct: 153 FALSVGAAVGMEFWARWAHRALWHASLWHMH 183
>02_05_0396 -
28600855-28601475,28601579-28601761,28601970-28602129,
28602217-28602795,28603044-28603618,28604161-28604176,
28605566-28605663,28605774-28606286
Length = 914
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 263 HDSTGSDISTSSVWSFPGDKISFWKKLFWVLTWPIRL 299
HD + S W+ P D++ F + W L PIR+
Sbjct: 731 HDICQDSLPADSPWTCPNDRVFFDASVIWGLIGPIRI 767
>10_08_0854 +
21086253-21086258,21086320-21086480,21087065-21087175,
21087275-21087329,21087796-21087963,21088232-21090082,
21090355-21090690
Length = 895
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 247 SVQNGDLERGIEMTRRHDS-TGSDISTSSVWS 277
S+ G LER M R++++ SD STSS+WS
Sbjct: 646 SISRGSLERNNLMERQNNTRNNSDASTSSLWS 677
>04_04_1408 +
33349232-33349450,33349715-33349782,33349853-33349881,
33349973-33350169,33350247-33350459,33350621-33350755,
33351122-33351238,33351332-33351385,33351574-33351690,
33352199-33352292,33352575-33352585
Length = 417
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 321 MCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMG 380
M W+ +S + I D+LN+P + + +L + E S+++ + +
Sbjct: 270 MLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDIT 329
Query: 381 ISNSIGSNT----FDILLCLGLPWLV 402
+ +IGS+T F I C+ + W++
Sbjct: 330 LGVAIGSSTQISMFVIPFCVVIGWMM 355
>11_01_0566 +
4466318-4466695,4466736-4466909,4466941-4467038,
4467211-4467346
Length = 261
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 318 TFIMCITWIGSVSYLVAWIITVVGDTLNVPDSITG 352
T + C+T + S LVA T G +N PDS G
Sbjct: 93 TMVTCVTSVESSMELVATDSTTKGTHINTPDSTKG 127
>08_02_0986 +
23328056-23328145,23328289-23329227,23329313-23329570,
23330384-23330692
Length = 531
Score = 28.7 bits (61), Expect = 9.4
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 254 ERGIEMTRRHDSTGSDISTSSVWSFPGDKISFWKKLFWVLTWP-IRLILWATIPDCRHRH 312
++ + HD TGS T S+W FP DK+ + ++LT P I I + + D +H
Sbjct: 302 DQAVTFVDNHD-TGS---TQSLWPFPSDKV--MQGYAYILTHPGIPCIFYDHVFDWNLQH 355
Query: 313 SIYPLTFI 320
I L I
Sbjct: 356 EIATLAEI 363
>06_03_1386 +
29816744-29816941,29817030-29817330,29817421-29817579,
29818916-29819211,29819534-29819761
Length = 393
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 218 EALLLVLMYTFYILEKI--NPLDASQRMTPRSVQNGDLERGIEMTRRHDSTGSDIST--- 272
+ L L FY + ++ N D + PR ++ DLE+ + +R+ + ST
Sbjct: 291 DILELCKQAAFYPIRELLNNEKDGRKADKPRPLRQSDLEKALSTSRKGKRAANGTSTGLQ 350
Query: 273 SSVWSFPGD 281
S VW P D
Sbjct: 351 SPVWIRPSD 359
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.327 0.141 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,387,033
Number of Sequences: 37544
Number of extensions: 515306
Number of successful extensions: 1342
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1317
Number of HSP's gapped (non-prelim): 26
length of query: 427
length of database: 14,793,348
effective HSP length: 84
effective length of query: 343
effective length of database: 11,639,652
effective search space: 3992400636
effective search space used: 3992400636
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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