Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000688-TA|BGIBMGA000688-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004837|Sodium/calcium exchanger
membrane region
(427 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43713| Best HMM Match : Na_Ca_ex (HMM E-Value=7.9e-32) 182 7e-46
SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 1e-40
SB_42414| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 2e-39
SB_15681| Best HMM Match : Na_Ca_ex (HMM E-Value=1.9e-36) 142 6e-34
SB_28247| Best HMM Match : Na_Ca_ex (HMM E-Value=2e-27) 136 2e-32
SB_45810| Best HMM Match : Na_Ca_ex (HMM E-Value=0) 131 9e-31
SB_8443| Best HMM Match : Calx-beta (HMM E-Value=0) 41 0.002
SB_44420| Best HMM Match : Calx-beta (HMM E-Value=2e-22) 40 0.004
SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.036
SB_15333| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.083
SB_57886| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.15
SB_24792| Best HMM Match : 7tm_1 (HMM E-Value=8.7e-09) 34 0.19
SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81) 31 1.8
SB_49035| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_48823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_28146| Best HMM Match : Na_Ca_ex (HMM E-Value=0.039) 29 9.5
SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
>SB_43713| Best HMM Match : Na_Ca_ex (HMM E-Value=7.9e-32)
Length = 228
Score = 182 bits (442), Expect = 7e-46
Identities = 75/154 (48%), Positives = 111/154 (72%), Gaps = 1/154 (0%)
Query: 78 LTRFQRQ-HGFILLHCFLALYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAA 136
+T++QRQ G I+ H F+A+Y F L +VC++YFV ++E IC+ LN+ SD+AGATFMAA
Sbjct: 1 MTQYQRQKQGGIVFHVFVAIYTFAALATVCDEYFVSSLERICDGLNLKSDVAGATFMAAG 60
Query: 137 SSSPELFINCVGTFVTEGDLGVGAVVGSAVFNVLAVPACCALFAGAVIELDWWSVTRDCM 196
SS+PE F + +G F+T+GD+G+G +VGSAVFN+L + A C +FAG+V+ L WW +TRD
Sbjct: 61 SSAPEFFTSVIGVFITKGDIGIGTIVGSAVFNILFIVAICGMFAGSVLTLSWWPLTRDSF 120
Query: 197 MYXXXXXXLILTLLDDKIYWHEALLLVLMYTFYI 230
Y L++ D +++W+E + LVLMY Y+
Sbjct: 121 CYMLSVAALVIITYDKEVHWYEGMALVLMYLLYV 154
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 342 DTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGSNTFDILLCLGL 398
D LN+ + G T +AAG+S PE +SV+ G +GI +GS F+IL + +
Sbjct: 43 DGLNLKSDVAGATFMAAGSSAPEFFTSVIGVFITKGDIGIGTIVGSAVFNILFIVAI 99
>SB_42413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 164 bits (398), Expect = 1e-40
Identities = 72/183 (39%), Positives = 114/183 (62%)
Query: 82 QRQHGFILLHCFLALYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPE 141
+R+HG +++H F+ LYCF+ L +C++YF ++E +C+RL I +D+AGATFMAA SS P
Sbjct: 44 ERRHGAVIIHTFICLYCFVALAILCDNYFCASLEKLCKRLRIPTDVAGATFMAAGSSMPT 103
Query: 142 LFINCVGTFVTEGDLGVGAVVGSAVFNVLAVPACCALFAGAVIELDWWSVTRDCMMYXXX 201
LFI F+ EGD+G+G ++GS++FN+L + A C LF+G VI L W + RD +Y
Sbjct: 104 LFIAIASVFMGEGDIGLGTIIGSSMFNILFITAICGLFSGMVISLHTWPIVRDSCVYVVN 163
Query: 202 XXXLILTLLDDKIYWHEALLLVLMYTFYILEKINPLDASQRMTPRSVQNGDLERGIEMTR 261
L++ + D+ I+++EAL+ ++YT YIL + D+ +G+EM
Sbjct: 164 LVGLLIVIHDNVIHFYEALIFPVLYTGYILIMVFNTRLENAFESAFETCCDINKGMEMVE 223
Query: 262 RHD 264
D
Sbjct: 224 MED 226
Score = 133 bits (322), Expect = 2e-31
Identities = 54/121 (44%), Positives = 88/121 (72%), Gaps = 3/121 (2%)
Query: 284 SFWKKLFWVLTWPIRLILWATIPDCRHR--HSIYPLTFIMCITWIGSVSYLVAWIITVVG 341
+F K++ W+ P+ L + T+PDCR + + YP TF + I W+ ++SY++ W ++++G
Sbjct: 416 TFSKRIVWIFMLPVHLAFYVTMPDCRVKKWEAWYPATFALSIIWMAALSYVLVWTVSIIG 475
Query: 342 DTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGSNTFDILLCLGLPWL 401
+T ++P+ I GLT+LAAG+S+P+ +SS++V K G G M ++N IGSN FD+ LCLGLPWL
Sbjct: 476 ETFSIPEYIMGLTLLAAGSSVPDVMSSLIVAKHGMGDMALANCIGSNIFDV-LCLGLPWL 534
Query: 402 V 402
+
Sbjct: 535 L 535
Score = 42.7 bits (96), Expect = 5e-04
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 344 LNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGSNTFDIL 393
L +P + G T +AAG+S+P ++ G G +G+ IGS+ F+IL
Sbjct: 83 LRIPTDVAGATFMAAGSSMPTLFIAIASVFMGEGDIGLGTIIGSSMFNIL 132
Score = 37.1 bits (82), Expect = 0.027
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 114 IEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVTEGDLGVGAVVGSAVFNVLAV 172
+ II E +I I G T +AA SS P++ + + GD+ + +GS +F+VL +
Sbjct: 471 VSIIGETFSIPEYIMGLTLLAAGSSVPDVMSSLIVAKHGMGDMALANCIGSNIFDVLCL 529
>SB_42414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 160 bits (389), Expect = 2e-39
Identities = 81/240 (33%), Positives = 139/240 (57%), Gaps = 20/240 (8%)
Query: 189 WSVTRDCMMYXXXXXXLILTLLDDKIYWHEALLLVLMYTFYIL-----EKINPL--DASQ 241
W + RD +Y L++++ D+K+YW+E L+ V++Y YI+ +++ L +
Sbjct: 57 WKM-RDSTVYVASVIVLMVSIYDNKVYWYEGLIFVIVYAIYIVIMYFNDQVEGLCKTVKK 115
Query: 242 RMTPRSVQNGDLERGIEMTRRHDSTGSDISTSSVWSF---PGDKIS----FWKKLFWVLT 294
++ + V+ +G++ +S +++ S W F P ++ + WV T
Sbjct: 116 KLKKKKVKPEGEGQGVDEDGGEESE-DELNKSEDWGFHDTPRTRLKPPEGACARALWVFT 174
Query: 295 WPIRLILWATIPDCRHR--HSIYPLTFIMCITWIGSVSYLVAWIITVVGDTLNVPDSITG 352
P L+ + TIPDCR + Y +TF + + W+ +SY + W++ ++G T +P+ + G
Sbjct: 175 LPSILVFYVTIPDCRKKTWRKFYLVTFTVAVIWMAVLSYFLVWMVAIIGYTYTIPECVMG 234
Query: 353 LTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGSNTFDILLCLGLPWLVKSLF-YPSTP 411
+T LAAG+SLP+A++S++V KQG G M +SN IGSN FD +LCLG+PWL+KS F P P
Sbjct: 235 MTFLAAGSSLPDAIASLVVAKQGSGDMAVSNCIGSNVFD-MLCLGIPWLIKSAFLQPGKP 293
Score = 37.9 bits (84), Expect = 0.016
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 104 SVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVTEGDLGVGAVVG 163
+V + V + II I + G TF+AA SS P+ + V GD+ V +G
Sbjct: 209 AVLSYFLVWMVAIIGYTYTIPECVMGMTFLAAGSSLPDAIASLVVAKQGSGDMAVSNCIG 268
Query: 164 SAVFNVLAV 172
S VF++L +
Sbjct: 269 SNVFDMLCL 277
>SB_15681| Best HMM Match : Na_Ca_ex (HMM E-Value=1.9e-36)
Length = 183
Score = 142 bits (343), Expect = 6e-34
Identities = 64/137 (46%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Query: 97 YCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFV-TEGD 155
Y FL L C+++FVP++ +I E+L + D+AGATFMAA S+PELF + +GTF+ + +
Sbjct: 3 YMFLALAIACDEFFVPSLTVIIEKLELKEDVAGATFMAAGGSAPELFTSFIGTFIDPKSN 62
Query: 156 LGVGAVVGSAVFNVLAVPACCALFAGAVIELDWWSVTRDCMMYXXXXXXLILTLLD-DKI 214
+G+G +VGSAVFNVL V CA+F+ V+EL WW + RDC+ Y LI+ L D I
Sbjct: 63 VGIGTIVGSAVFNVLFVIGMCAMFSKGVLELTWWPLFRDCIFYSLALIILIIFFLSGDVI 122
Query: 215 YWHEALLLVLMYTFYIL 231
W E+L+L+L Y Y++
Sbjct: 123 VWWESLVLLLCYFAYVI 139
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 337 ITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVT-KQGHGTMGISNSIGSNTFDILLC 395
+TV+ + L + + + G T +AAG S PE +S + T +GI +GS F++L
Sbjct: 20 LTVIIEKLELKEDVAGATFMAAGGSAPELFTSFIGTFIDPKSNVGIGTIVGSAVFNVLFV 79
Query: 396 LGL 398
+G+
Sbjct: 80 IGM 82
>SB_28247| Best HMM Match : Na_Ca_ex (HMM E-Value=2e-27)
Length = 236
Score = 136 bits (330), Expect = 2e-32
Identities = 61/138 (44%), Positives = 95/138 (68%), Gaps = 5/138 (3%)
Query: 269 DISTSSVWSFPGDKISFWKKLFWVLTWPIRLILWATIPDCRHR--HSIYPLTFIMCITWI 326
D++ S +S P + W ++ WVL PI L + TIPD + L+FI+CI WI
Sbjct: 22 DLTLGSPFSPPEN---VWPRICWVLGLPINLSFFLTIPDVKKPSCEKWVVLSFIICIVWI 78
Query: 327 GSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIG 386
G SY++ W++TV+G T +PDS+ GL+++A G+S+P+ +SS+ V ++G G M +S+++G
Sbjct: 79 GVTSYVLVWMVTVIGYTFLIPDSVMGLSLVAFGSSVPDCLSSLFVARKGDGDMAVSHTVG 138
Query: 387 SNTFDILLCLGLPWLVKS 404
SN FDILLCLG+PWL+K+
Sbjct: 139 SNVFDILLCLGIPWLIKT 156
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 96 LYCFLLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVTEGD 155
+ C + +G V V + +I I + G + +A SS P+ + +GD
Sbjct: 72 IICIVWIG-VTSYVLVWMVTVIGYTFLIPDSVMGLSLVAFGSSVPDCLSSLFVARKGDGD 130
Query: 156 LGVGAVVGSAVFNVL 170
+ V VGS VF++L
Sbjct: 131 MAVSHTVGSNVFDIL 145
>SB_45810| Best HMM Match : Na_Ca_ex (HMM E-Value=0)
Length = 582
Score = 131 bits (317), Expect = 9e-31
Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 4/164 (2%)
Query: 100 LLLGSVCEDYFVPAIEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVTEGDLGVG 159
L L VC+D+FVP++E I E+L+++ D+AGATFMAA SS+PELF + G V + D+GVG
Sbjct: 29 LALAIVCDDFFVPSLEAISEKLDLSEDVAGATFMAAGSSAPELFTSIAGVTV-DSDVGVG 87
Query: 160 AVVGSAVFNVLAVPACCALFAGAVIELDWWSVTRDCMMYXXXXXXLILTLLDDKIYWHEA 219
+VGSA+FN+L + A A F+G V++LDW + RD + Y I+ D K +EA
Sbjct: 88 TIVGSAIFNLLVIIALTAAFSGQVLQLDWRPLLRDSVAYSLSIAFFIIFSWDGKFEMYEA 147
Query: 220 LLLVLMYTFYI-LEKINP--LDASQRMTPRSVQNGDLERGIEMT 260
+L+++Y YI + K NP +D + P+ Q + E+T
Sbjct: 148 AVLLILYIAYIVVMKFNPKLMDLLAEVGPKGGQVSPQGQPTEVT 191
Score = 97.9 bits (233), Expect = 1e-20
Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Query: 289 LFWVLTWPIRLILWATIPDCR--HRHSIYPLTFIMCITWIGSVSYLVAWIITVVGDTLNV 346
+ +VL++P + TIPDC H + +F M I WI +S+ + ++ G LNV
Sbjct: 381 VLFVLSFPFVCLYTWTIPDCSKPHNRKWFLASFTMSIVWIAILSFGLVTVVGRSGCILNV 440
Query: 347 PDSITGLTILAAGTSLPEAVSSVLVTKQGHGTMGISNSIGSNTFDILLCLGLPWLVKSLF 406
GL I+A GTS+P+A+SS++V + G G M +SN+IGSN FDI L LGLP++++ L
Sbjct: 441 DKFTMGLVIIAIGTSVPDALSSIIVARDGFGDMAVSNAIGSNVFDINLGLGLPFVIRILI 500
Query: 407 YPSTP 411
P
Sbjct: 501 DKMEP 505
Score = 36.7 bits (81), Expect = 0.036
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 337 ITVVGDTLNVPDSITGLTILAAGTSLPEAVSSVL-VTKQGHGTMGISNSIGSNTFDILLC 395
+ + + L++ + + G T +AAG+S PE +S+ VT +G+ +GS F++L+
Sbjct: 43 LEAISEKLDLSEDVAGATFMAAGSSAPELFTSIAGVTVD--SDVGVGTIVGSAIFNLLVI 100
Query: 396 LGL 398
+ L
Sbjct: 101 IAL 103
>SB_8443| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 694
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 127 IAGATFMAAASSSPELF---INCVGTFVTEGDLGVGAVVGSAVFNVLAVPACC 176
++ T MA SS+PE+ I +G GDLG +VGSA FN+ + C
Sbjct: 66 VSNLTLMALGSSAPEILLSVIEIIGNNFKAGDLGPSTIVGSAAFNLFVIIGVC 118
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 319 FIMCITWIGSVSYLVAWIITVVGDTLNVPDSITGLTILAAGTSLP 363
F++ I WIG ++ ++ + + G T+ + DS+ +T +A GTSLP
Sbjct: 649 FVVSILWIGVLTAVIGDLASHFGCTIYLADSVVAITFVALGTSLP 693
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 348 DSITGLTILAAGTSLPEAVSSVLVTKQGH---GTMGISNSIGSNTFDILLCLGL 398
++++ LT++A G+S PE + SV+ + G +G S +GS F++ + +G+
Sbjct: 64 ETVSNLTLMALGSSAPEILLSVIEIIGNNFKAGDLGPSTIVGSAAFNLFVIIGV 117
>SB_44420| Best HMM Match : Calx-beta (HMM E-Value=2e-22)
Length = 461
Score = 39.9 bits (89), Expect = 0.004
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 127 IAGATFMAAASSSPELFINCVGTFVTEG----DLGVGAVVGSAVFNVLAVPACCAL 178
+A T MA SS+PE+ ++ + + G LG +VGSA FN+L + C +
Sbjct: 98 VANLTLMALGSSAPEILLSIIEITIMNGFEAGALGPSTIVGSAAFNLLCITGVCVM 153
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 348 DSITGLTILAAGTSLPEAVSSVL-VTKQG---HGTMGISNSIGSNTFDILLCLGL 398
+++ LT++A G+S PE + S++ +T G +G S +GS F++L G+
Sbjct: 96 ETVANLTLMALGSSAPEILLSIIEITIMNGFEAGALGPSTIVGSAAFNLLCITGV 150
>SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 36.7 bits (81), Expect = 0.036
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 348 DSITGLTILAAGTSLPEA--VSSVLVTKQGHGTMGISNSIGSNTFDILLCLGLPWLVKSL 405
D I GL + LP + V+ V VT++ T G + S F I CL LPWL KS+
Sbjct: 573 DFIEGLLVKDPTIKLPPSTCVARVQVTREAPITDGTLSCFSSERFTIAECLTLPWLKKSI 632
>SB_15333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 35.5 bits (78), Expect = 0.083
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 127 IAGATFMAAASSSPELFINCVGT---------FVTEGDLGVGAVVGSAVFNVLAVPACCA 177
+A T MA SS+PE+ + V T T+G LG +VGSA FN+L + A C
Sbjct: 95 VANLTLMALGSSAPEILLAVVETGQELALGQTTATDG-LGTFTIVGSASFNLLLITAVCV 153
Query: 178 L 178
+
Sbjct: 154 V 154
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 348 DSITGLTILAAGTSLPEAVSSVLVTKQ----GHGT----MGISNSIGSNTFDILL 394
+++ LT++A G+S PE + +V+ T Q G T +G +GS +F++LL
Sbjct: 93 ETVANLTLMALGSSAPEILLAVVETGQELALGQTTATDGLGTFTIVGSASFNLLL 147
>SB_57886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 34.7 bits (76), Expect = 0.15
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 339 VVGDTLNVPDSITGLTILAAGTSLPEAVSSVLVTKQGHG 377
++G +++ +S+TG+TI+A GTSLP+ ++S Q G
Sbjct: 49 LLGCVVDLRNSVTGITIIAIGTSLPDTMASRSAALQDTG 87
>SB_24792| Best HMM Match : 7tm_1 (HMM E-Value=8.7e-09)
Length = 303
Score = 34.3 bits (75), Expect = 0.19
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 303 ATIPDCRHRHSIYPLTFIMCI-TWIGSVSYLVAWIITVVGDTLNVP-DSITGLTILAAGT 360
AT+ RHR + + I C+ TW+ S Y W I + GD N+ S+ G+T L T
Sbjct: 128 ATLLPLRHRRTSTRMYLICCVYTWVASGLY--TWWIMMGGDMANMKFASVAGITCLMVIT 185
Query: 361 SLPEAVSSVLVTKQGHGTMGISN 383
+ A+ L K H +SN
Sbjct: 186 TSYLAI--FLKVKHQHHQHNMSN 206
>SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81)
Length = 468
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 317 LTFIMCITWIGSVSYLVAWIITV---VGDTLNVPDSITGLTILAAGTSLPEAVSS 368
+T +TW+ +VS+ V W++TV V + V S+T + ++ +L VSS
Sbjct: 135 VTISSSVTWVVTVSFSVTWVVTVSFNVTWVVTVCSSVTWVFTVSYSVTLVVTVSS 189
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 317 LTFIMCITWIGSVSYLVAWIITV---VGDTLNVPDSITGLTILAAGTSLPEAVSSVL--V 371
+T +TW+ +VS+ V W++TV V + V S+T + +++ + VSS + V
Sbjct: 255 VTVSFSVTWVVTVSFNVTWVVTVSYSVTLVVTVSYSVTLVVTVSSSVTWVVTVSSSVTWV 314
Query: 372 TKQGHGTMGISNSIGSNTFDILLCLGLPWLVKSLF 406
+ S T+ + + + W+V F
Sbjct: 315 VTVSSSVTSVVTVSSSVTWVVTVSFSVTWVVTVSF 349
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 317 LTFIMCITWIGSVSYLVAWIITV---VGDTLNVPDSITG-LTILAAGTSLPEAVSSV 369
+T +TW+ +VS V W++TV V + V S+T +T+ ++ TS+ SSV
Sbjct: 395 VTVSSSVTWVVTVSSSVTWVVTVSSNVTRVVTVSSSVTWVVTVSSSVTSVVTVSSSV 451
Score = 28.7 bits (61), Expect = 9.5
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 317 LTFIMCITWIGSVSYLVAWIITV---VGDTLNVPDSITGLTILAAGTSLPEAVSS---VL 370
+T +TW+ +V V W++TV V + V S+T + +++ + VSS +
Sbjct: 185 VTVSSSVTWVVTVCSSVTWVVTVSSSVTLVVTVSSSVTWVVTVSSSVTWVVTVSSSVTSV 244
Query: 371 VTKQGHGTMGISNSIGSNTFDILLCLGLPWLV 402
VT T ++ S S T+ + + + W+V
Sbjct: 245 VTVSSSVTRVVTVSF-SVTWVVTVSFNVTWVV 275
>SB_49035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 29.9 bits (64), Expect = 4.1
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 258 EMTRRHDSTGSDISTSSVWSFPGDKISFWKKLFWVLTWPIRLILWATIPDCRHRHSIYPL 317
E TR D+ + + S W + F+++ F+ T L+ +TIP S P+
Sbjct: 35 EKTRDSDTRFNTLEYS--WKYIRITSGFYRRAFFADTDSTILVTDSTIPVS---DSTIPV 89
Query: 318 TFIMCITWIGSVSYLVAWIITVVGDTLNVPDS---ITGLTILAAGTSLPEAVSSVLVT 372
T + S + I V T+ V DS +T TIL +++P S++LVT
Sbjct: 90 TDSTILV-TDSTILVTDCTILVTDSTIPVTDSTIPVTDSTILVTDSTIPVTDSTILVT 146
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 1 MLIRTRQYERKHRVATIVRVVLFFGIPIVYMVAK-SIASNQVIVFDEPEAFSSRH 54
++ + R E VA + +LFFG+PI +++A ++ + +V++ E + +H
Sbjct: 1451 LICKARNVELASTVAQTIDTLLFFGVPIGFILAPFAVEARRVVLTICGEGMAQQH 1505
>SB_48823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 226 YTFYI-LEKINPLDASQRMTPRSVQNGDLERGIEMT--RRHDSTGSDISTSSVWSFPGDK 282
YT + LEK +P + + R++Q GD RGI T R + G SFPG
Sbjct: 105 YTVRVQLEKEHPQSQGKALKARALQEGDRYRGIRGTCIRYVEYRGGTQWVECDASFPGHS 164
Query: 283 ISFWKKLFWVLTWPIRLILWATIPD 307
++ + +T +I ++P+
Sbjct: 165 LTITITIEITITITTTIIYCKSLPE 189
>SB_28146| Best HMM Match : Na_Ca_ex (HMM E-Value=0.039)
Length = 751
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 163 GSAVFNVLAVPACCALFAGAVIELDWWSVTRDCMMYXXXXXXLILTLLDDKIYWHEALLL 222
G+ +F V L G L+ TRD + Y + +T+ +I EA+
Sbjct: 567 GAGIFVTTVVVGSVTLCTGG-FHLNNRPFTRDVLFYLGAVSWMFITMYRQRITMLEAIGF 625
Query: 223 VLMYTFYILEKINPLDASQRMTPRSVQN 250
++ Y Y++ I +QR R ++
Sbjct: 626 IIFYFAYVVVVIVGRYVNQRWKRRQEED 653
>SB_10268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 116 IICERLNIASDIAGATFMAAASSSPELFINCVGTFVTEGDLGVGAVVGSAVFNV 169
++ RL IAS MA ++ L + G V EG++ VG + A++ V
Sbjct: 54 LVGARLAIASGAFSGVVMAVGQAAIVLVLWYGGKLVNEGEMNVGILTAFALYTV 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.327 0.141 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,715,788
Number of Sequences: 59808
Number of extensions: 526717
Number of successful extensions: 1450
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1381
Number of HSP's gapped (non-prelim): 46
length of query: 427
length of database: 16,821,457
effective HSP length: 84
effective length of query: 343
effective length of database: 11,797,585
effective search space: 4046571655
effective search space used: 4046571655
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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