GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000688-TA|BGIBMGA000688-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004837|Sodium/calcium exchanger
membrane region
         (427 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            28   0.56 
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    26   2.3  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    26   2.3  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    26   2.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   9.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   9.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   9.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.9 bits (59), Expect = 0.56
 Identities = 10/26 (38%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 402  VKSLFYPSTPENHWVTDLYFIRINNG 427
            +K+ F P+ P+N W+   +++RI NG
Sbjct: 1367 LKATFTPTEPKNLWIVS-FWVRIGNG 1391


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 114 IEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVT 152
           ++I+C++   A  I+GA F      S +LF + +G  VT
Sbjct: 434 VQIVCQQCQKAMTISGAKFFTV---SLDLFASVLGAVVT 469


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 114 IEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVT 152
           ++I+C++   A  I+GA F      S +LF + +G  VT
Sbjct: 287 VQIVCQQCQKAMTISGAKFFTV---SLDLFASVLGAVVT 322


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 114 IEIICERLNIASDIAGATFMAAASSSPELFINCVGTFVT 152
           ++I+C++   A  I+GA F      S +LF + +G  VT
Sbjct: 434 VQIVCQQCQKAMTISGAKFFTV---SLDLFASVLGAVVT 469


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 145 NCVGTFVTEGDLGVGAVVGSAVFNVLAVPACCALFAG 181
           + V  F+T GDL +    G  VF  L + A  ++ AG
Sbjct: 359 HAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAG 395


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 8/47 (17%)

Query: 283 ISFWKKLFWVLTWPIRLILWATIPDCRHRHSIYPLTFIMCITWIGSV 329
           ++F  + F V+ +P++   W T+   +        T I C+T +GSV
Sbjct: 130 VAFTFERFIVVRYPLKRQSWCTVRRAK--------TIIACLTMVGSV 168


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 109 YFVPAIEIICERLNIASD 126
           ++ PAIE++CE   +A +
Sbjct: 293 WWTPAIEVLCENCRLAKE 310


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.141    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,962
Number of Sequences: 2123
Number of extensions: 16687
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 7
length of query: 427
length of database: 516,269
effective HSP length: 66
effective length of query: 361
effective length of database: 376,151
effective search space: 135790511
effective search space used: 135790511
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 49 (23.8 bits)