Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000687-TA|BGIBMGA000687-PA|IPR001734|Na+/solute
symporter
         (320 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   3.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.1  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   9.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.1  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 35  FDWLDYVVFGAMLL-LSSLIGVYFAFFASKKQNTTSE 70
           F W    +FG ++L L S +G  F  +ASKKQ T  E
Sbjct: 174 FGWSLIFLFGRIVLQLLSSLG--FLLYASKKQFTFEE 208


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 289 VSVDGCEGNFTVPKEPSMSTETEF 312
           V+V+ CEG+     +PS+ T T F
Sbjct: 54  VAVNKCEGSCKSQVQPSVITPTGF 77


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 200 IIVVAIGATCVALVFLVEHMGALIQAGKSLAGITA 234
           II++++G   +A+VFL+  + AL++ G +L   TA
Sbjct: 129 IIIISLGCLILAVVFLLT-LSALLE-GFTLYHTTA 161


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 200 IIVVAIGATCVALVFLVEHMGALIQAGKSLAGITA 234
           II++++G   +A+VFL+  + AL++ G +L   TA
Sbjct: 129 IIIISLGCLILAVVFLLT-LSALLE-GFTLYHTTA 161


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 200 IIVVAIGATCVALVFLVEHMGALIQAGKSLAGITA 234
           II++++G   +A+VFL+  + AL++ G +L   TA
Sbjct: 129 IIIISLGCLILAVVFLLT-LSALLE-GFTLYHTTA 161


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 21  VRAHHSNCIMTIVYFDWLDYVVFGAMLLLSSLIGVY 56
           +  +  N   TI Y  +  +  FG +LL+ +  GV+
Sbjct: 247 IAGYEFNANFTISYILFALFNTFGTILLIMTCSGVH 282


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 286 PKAVSVDGCEGNFTVPKEPSMS 307
           P A+ ++GC     +  +PSM+
Sbjct: 47  PAALPIEGCNETGFINSQPSMA 68


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 286 PKAVSVDGCEGNFTVPKEPSMS 307
           P A+ ++GC     +  +PSM+
Sbjct: 47  PAALPIEGCNETGFINSQPSMA 68


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.138    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,014
Number of Sequences: 317
Number of extensions: 2358
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 8
length of query: 320
length of database: 114,650
effective HSP length: 57
effective length of query: 263
effective length of database: 96,581
effective search space: 25400803
effective search space used: 25400803
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)