Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000686-TA|BGIBMGA000686-PA|IPR005399|KCNAB voltage-gated
K+ channel, beta subunit, IPR001395|Aldo/keto reductase
(529 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_51365| Best HMM Match : ig (HMM E-Value=0.00037) 53 5e-07
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 48 2e-05
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 46 8e-05
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 8e-05
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 42 0.001
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 39 0.011
SB_3970| Best HMM Match : Drf_FH1 (HMM E-Value=1.2) 31 2.3
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 31 3.0
SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.0
SB_49745| Best HMM Match : A2M_comp (HMM E-Value=0) 30 4.0
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 29 7.0
SB_226| Best HMM Match : Tektin (HMM E-Value=0) 29 7.0
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 29 9.3
SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1) 29 9.3
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 55.2 bits (127), Expect = 1e-07
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 127 EESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKRNVRRTSIIITTKIYWSTKFH 186
E EDV + AL+NG + D ++ + + E E+G ++K ++R I +TTK+ S + H
Sbjct: 43 ETGCEDVCLFALKNGYRMLDTADIY--QNEKEVGSAVRKSGLKREDIYVTTKLKPSEEGH 100
Query: 187 TNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLHKVDPVCPMEELVRVMNYVINEGW 246
+N + K+ ES+K +L + Y+D+ L+H P + ++ + EG
Sbjct: 101 SN--------ALKYAKESIK----KLDIGYVDLFLIHTPRPGNIIAAYDALLT-LKEEGL 147
Query: 247 VMYWGTARWSPSEIMDAYTNCRQFNCITPIVEQTEYHMFCREK 289
+ G + + + + R+ C TP + Q E + F R++
Sbjct: 148 IRSVGVSNFGVHHLEE----LRKAGCRTPAINQIEINPFWRQE 186
>SB_51365| Best HMM Match : ig (HMM E-Value=0.00037)
Length = 498
Score = 53.2 bits (122), Expect = 5e-07
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 148 SEAHCAKGEAELGRILKKRNVRRTSIIITTKIYWSTKFHTNNRSDER---GLSRKHVIES 204
S AH + A + +++ + I+ + T+ HT + S R GL V+E
Sbjct: 284 SSAHISNTRAVVKQLMPSTSATPHPTTISLVVANGTQ-HTPSGSRNRVAGGLKFDRVLEQ 342
Query: 205 VKASLGRLQVEYIDVVLLHKVDPVCPMEELVRVMNYVINEGWVMYWGTARWSPSEIMDAY 264
+ SL R++ + +D+ LH D P+EE ++ ++ + EG +G + ++ E+ + Y
Sbjct: 343 MNTSLKRMKRDKVDIFYLHAPDHKTPIEESLKAVDQLHKEGKFKEFGLSNYAAWEVAEIY 402
Query: 265 TNCRQFNCITPIVEQTEYH 283
C+ N I P + Q Y+
Sbjct: 403 YLCKANNYILPTLYQGMYN 421
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 47.6 bits (108), Expect = 2e-05
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 111 GLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKRNVRR 170
G ++P GLGL+ L E+ + V+ ALENG + D + ++ E +G L++ V R
Sbjct: 6 GYKIPRFGLGLYD-LDEKHTKQAVLWALENGYRMIDTAASY--NNEKRVGEALRESAVPR 62
Query: 171 TSIIITTKIYWSTK-FHTNNRSDERGLS 197
+ + + TK+Y + + ++ +R LS
Sbjct: 63 SEVYLVTKVYHTDHGYEKTMKAYDRSLS 90
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 46.0 bits (104), Expect = 8e-05
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 111 GLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKRNVRR 170
G ++P +GLG + S+++ V+ ALE+G L D + + E +G ++ N+ R
Sbjct: 73 GRKIPLLGLGAHDIHSKQA----VLWALESGYRLIDTASRY--HNEQSVGEAVRCSNIPR 126
Query: 171 TSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLHKVDPVCP 230
I + TK+Y++ E G K +++ SL RL + Y+D+ L+H P
Sbjct: 127 CEIYVVTKVYFT----------EHGY--KETMDAFYKSLTRLGLGYVDLYLIHFPVPSGV 174
Query: 231 MEELVRVMNYVINEGWVMYWGTARWSPSEIMDAYTNCRQFNCITPIVEQTEYHMFCREK 289
+ + M + + G + G + ++ + RQ + P V Q E H F + K
Sbjct: 175 VGSW-QAMIDLRSRGLIRSIGVSNFNIQHL----EALRQQTGVVPAVNQIEVHPFLQMK 228
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 46.0 bits (104), Expect = 8e-05
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKRNVR 169
SG +P +G G T L E+++ VV TALE G L D ++ + E ++ + + +
Sbjct: 333 SGYTMPVMGFGTAT-LGEDTLS-VVKTALETGYRLIDTAQGY-PLSEPQVAKAIADSGIP 389
Query: 170 RTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
R I I TK++ R L + ++SV+ SL L +YID+ L+H
Sbjct: 390 RKDIFIITKLH------------PRYLGYEPTLKSVEMSLRALSTDYIDLFLIH 431
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 43.6 bits (98), Expect = 4e-04
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 18/117 (15%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKK---R 166
+GL +P +GLG W +E+ V A++ G D + A+ + E E+G L++
Sbjct: 8 NGLEMPVLGLGTWKS-KPGQVENAVKFAIKEGYRHIDCAYAY--RNEKEVGDALRELLGS 64
Query: 167 NVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
V R + IT+K+ W+TK +N D R + ++S+K LG ++Y+D+ L+H
Sbjct: 65 VVERKDLFITSKL-WNTK---HNPKD----VRSNCVDSLK-DLG---LDYLDLYLIH 109
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 41.9 bits (94), Expect = 0.001
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 126 SEESIEDVVMTALENGINLFDLSEAHCAKGEA--ELGRILKKRNVRRTSIIITTKIYWST 183
S+E + + V A+E G D +E + +GE L +L + V+R + +T+K+ W
Sbjct: 63 SKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL-WCD 121
Query: 184 KFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
H ++ V+ + +A+L LQ++Y+D+ L+H
Sbjct: 122 SHHPDD-----------VLPACQATLKNLQLDYLDLYLIH 150
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 38.7 bits (86), Expect = 0.011
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 197 SRKHVIESVKASLGRLQVEYIDVVLLHKVDPVCPMEELVRVMNYVINEGWVMYWGTARWS 256
S ++ S + SL RL ++ ID+ LLH V P+EE V +++EG + WG +
Sbjct: 40 SEMKMMLSCEKSLERLGIDRIDLYLLHWEGRV-PLEETVDAFRELVDEGMIARWGVSNLD 98
Query: 257 PSEIMDAYTNCRQFNCITPIVEQ 279
+ ++ + CR + +V Q
Sbjct: 99 LGDPLE--STCRHASLALAVVLQ 119
>SB_3970| Best HMM Match : Drf_FH1 (HMM E-Value=1.2)
Length = 558
Score = 31.1 bits (67), Expect = 2.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 4 KGVEGGGKEGSQMSRSESTVSRCTPHTPLGLPDSASVDSN 43
K EGGG EG+ +S S+ + TP P+ + + ++DS+
Sbjct: 319 KKEEGGGLEGTTQRQSVSSSTSSTPKEPIPIKEVLAMDSS 358
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 399 MRSSGSKEQVTGE---EPRTYGDKLRDLANLANSLNCSMSQLAVAWCLKNESVNC 450
+R + KE+V G EPR K + + L+N + + V C K+ESVNC
Sbjct: 1228 LRGNNDKEEVVGAQNIEPRKDNVKDQITSELSNKRKLIVDEENVGNCDKDESVNC 1282
>SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 30.7 bits (66), Expect = 3.0
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 160 GRILKKRNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDV 219
G L + N + ++ITT+ +ST +T+N + L + + ++ S RL + ++
Sbjct: 43 GTKLCENNSQHLPVLITTRHDYSTSANTHNARNSSNLLKINSVKITPDSAPRLHLATWNI 102
Query: 220 -VLLHKVDPVCPMEELVRVMNYVINEGWVMYWGTARWSPSEIMDAYTNCRQFNCITPIVE 278
+ K +C + R+ + E W+ ++ + + D T NC P V
Sbjct: 103 RAMNRKAASICDLVISKRIDVLALVETWLTAENNSK--STVVEDTSTRLPVPNCSDPTVA 160
Query: 279 QTEYHMFCREKPELYMPELYHKIGVG 304
++ R+ +++P G+G
Sbjct: 161 DVINNL--RDFDFIHLPRAGRGGGIG 184
>SB_49745| Best HMM Match : A2M_comp (HMM E-Value=0)
Length = 1079
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 103 RYKNLGKSGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSE 149
RYK GK+G+ + ++G+ + E S+++ + +E I +++SE
Sbjct: 959 RYKKAGKTGMAIIDVGVFTGFAVDERSLKE-LQKKMEGSIGKYEISE 1004
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 169 RRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGR 211
R+TS++ W ++ S+E L RKH+ E ++A LGR
Sbjct: 648 RKTSLMSRYMWQWDRSSGLDSDSEEDLLDRKHLQEFIQAELGR 690
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 29.5 bits (63), Expect = 7.0
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 158 ELGRILKKRNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYI 217
E GR++++R VRRT +TTK +T+ T++++ + K V+ES + G E
Sbjct: 2064 EEGRVVRRRIVRRT---VTTKTL-TTRTVTSDQAGPEEMPTKEVLESAEPVKGTEVPEEG 2119
Query: 218 DV 219
DV
Sbjct: 2120 DV 2121
>SB_226| Best HMM Match : Tektin (HMM E-Value=0)
Length = 534
Score = 29.5 bits (63), Expect = 7.0
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 358 SAITTGKGLGREEITGLFAKSRFNRKYSTFSWCEEDLAVPEMRSSGSKEQVTGEEPRTYG 417
S I G G E + SR KYS W ++ SSG KE+ T E R
Sbjct: 65 SKILNGSSSGLEHLPYTAVSSRAIHKYSPQQWRSSNMLNV---SSGEKERATAERLRDEC 121
Query: 418 DKLRDLANL 426
+LR +L
Sbjct: 122 SRLRTETSL 130
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 29.1 bits (62), Expect = 9.3
Identities = 25/123 (20%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 371 ITGLFAKSRFNRKYSTFSWCEEDLAVPEMRSSGSKEQVTGEEPRTYGDKLRDLANLANSL 430
+T LF+KSR + ++ + + A+ ++ ++ +++Q EP+ D + D L N++
Sbjct: 3 LTFLFSKSRIDEEFKRRVLAKYEQAIDDIDANAARDQAL--EPQELRDTITDSTELENAI 60
Query: 431 NCSMSQLAVAWCLK----NESVNCLLLGATSVEQFKENIHALQVYIKKIFKVCVKSFKLL 486
++ + K E V LL + + + + N Q+ K + V + +LL
Sbjct: 61 ESLHTKFSKRMSFKLTELQEEVGNDLLTDSGLSEEEAN----QIVAKLMANVAATNKRLL 116
Query: 487 QQS 489
+++
Sbjct: 117 EEA 119
>SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 782
Score = 29.1 bits (62), Expect = 9.3
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 158 ELGRILKKRNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYI 217
E GR++K+R VRRT +TTK +T+ T++++ + + V+ES + G E
Sbjct: 595 EEGRVVKRRIVRRT---VTTKTL-TTRTVTSDQAGPEEMPTEEVLESAEPVKGTEVPEEG 650
Query: 218 DV 219
DV
Sbjct: 651 DV 652
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,408,478
Number of Sequences: 59808
Number of extensions: 704466
Number of successful extensions: 1534
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1523
Number of HSP's gapped (non-prelim): 19
length of query: 529
length of database: 16,821,457
effective HSP length: 85
effective length of query: 444
effective length of database: 11,737,777
effective search space: 5211572988
effective search space used: 5211572988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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