Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000686-TA|BGIBMGA000686-PA|IPR005399|KCNAB voltage-gated
K+ channel, beta subunit, IPR001395|Aldo/keto reductase
(529 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 53 4e-07
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 48 1e-05
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 46 5e-05
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 46 7e-05
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 45 2e-04
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 43 5e-04
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 42 8e-04
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 40 0.004
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 38 0.017
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 35 0.16
Z81030-7|CAB02711.1| 366|Caenorhabditis elegans Hypothetical pr... 31 2.7
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 30 3.5
AF026214-1|AAB71313.1| 140|Caenorhabditis elegans Hypothetical ... 29 6.1
U46671-5|AAA85750.2| 147|Caenorhabditis elegans Hypothetical pr... 29 8.1
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 53.2 bits (122), Expect = 4e-07
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 31/183 (16%)
Query: 114 VPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKK----RNVR 169
+P IG+G W + EE + V+ + G D ++ + EA++GRIL+K ++
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVY--NNEAKIGRILEKLLPANGLK 68
Query: 170 RTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH----KV 225
R I IT+K+ S G+ + ES++ SL L+VEY+D++L+H +
Sbjct: 69 REDIWITSKLAPSNA----------GVKKAR--ESIEESLSNLKVEYLDLLLIHWPGSSL 116
Query: 226 DPVCPMEELVRVMNY-----VINEGWVMYWGTARWSPSEIMDAYTNCRQFNCITPIVEQT 280
P + +RV ++ ++ EG + G + + + + ++ + + P V Q
Sbjct: 117 KSENPANKKLRVESWNVMCEMMAEGKLRSVGVSNFEICHLEE----LKKDSNVVPAVNQV 172
Query: 281 EYH 283
EYH
Sbjct: 173 EYH 175
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 48.4 bits (110), Expect = 1e-05
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKK---- 165
SG +P IGLG W E + + TA+ G D AH + + E+G LK+
Sbjct: 9 SGYSIPAIGLGTWQSKPGE-VAAAIKTAVAAGYRHIDC--AHVYQNQKEVGEALKEILDE 65
Query: 166 RNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
V+R + IT+K+ W+T FH+ ++ H E++ L LQ+ Y+D++L+H
Sbjct: 66 GKVKREELFITSKV-WNT-FHSE--------AKAH--ENIDIILSDLQLSYVDLMLIH 111
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 48.4 bits (110), Expect = 1e-05
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKK---- 165
SG +P IGLG W E + + TA+ G D AH + + E+G LK+
Sbjct: 9 SGYSIPAIGLGTWQSKPGE-VAAAIKTAVAAGYRHIDC--AHVYQNQKEVGEALKEILDE 65
Query: 166 RNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
V+R + IT+K+ W+T FH+ ++ H E++ L LQ+ Y+D++L+H
Sbjct: 66 GKVKREELFITSKV-WNT-FHSE--------AKAH--ENIDIILSDLQLSYVDLMLIH 111
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 46.4 bits (105), Expect = 5e-05
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 18/122 (14%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILK----K 165
SG +P +G G + + E ++ + AL G +FD ++ + E ELG LK K
Sbjct: 17 SGYNIPFVGFGTYKVTGE-NVPPAIDAALTAGYRMFDTAKYYL--NEKELGEALKILLPK 73
Query: 166 RNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLHKV 225
+ R+ + +T+K + +K N R RG V+ SL LQ +YID+ L+H
Sbjct: 74 HGLSRSDVFLTSKFFPESK---NCREACRGF--------VEESLQSLQTDYIDMYLVHYP 122
Query: 226 DP 227
P
Sbjct: 123 KP 124
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 46.0 bits (104), Expect = 7e-05
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
Query: 102 LRYKNLGKSGLRVPNIGLG---LWTMLS--EESIEDVVMTALENGINLFDLSEAHC-AKG 155
+ Y+ + + +R+ IG G + M E+SI +V TA++ GIN D + ++
Sbjct: 83 MNYRQIPGTDIRMSKIGFGAAAIGGMFGNVEDSIIKIVETAIKQGINYIDTGYWYSQSRS 142
Query: 156 EAELGRILKKRNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVE 215
E+ LG+ L K + R + I+TK+ +F + + K ++ES+ SL RLQ+
Sbjct: 143 ESILGKALSK--IPRKAYYISTKV---GRFELDYARTFDFRADK-ILESLTNSLKRLQLT 196
Query: 216 YIDV--VLLHKVDPVCPMEELV 235
YID+ V +H D P E +V
Sbjct: 197 YIDICYVQIHDAD-FAPNESIV 217
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 428 NSLNCSMSQLAVAWCLKNESVNCLLLGATSVEQFKENI 465
+S N S+S+LA+ + L +V C L+G SV+Q +N+
Sbjct: 312 SSKNISISKLALDYALNFPNVICCLVGMDSVQQVLDNL 349
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 44.8 bits (101), Expect = 2e-04
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 111 GLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKR---- 166
G +P IGLG+ + +++ ++ + AL++G FD A+ K E LG LKK
Sbjct: 17 GYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFD--TANLYKNETFLGNSLKKYLPQF 74
Query: 167 NVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
+ R + ITTK+ T E+ L+ SL LQ +Y+D++L+H
Sbjct: 75 GLTREDVFITTKV--RTLNENTVEETEKQLAN---------SLATLQTDYVDLLLIH 120
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 44.4 bits (100), Expect = 2e-04
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKRNVR 169
+G+ +P IGLG W E I V TA++ G L D + + + E +G +K+ +
Sbjct: 12 NGVEMPVIGLGTWQSSPAEVIT-AVKTAVKAGYRLIDTASVY--QNEEAIGTAIKE--LL 66
Query: 170 RTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH------ 223
++ +++ +TK T+ L+ + ++ SL +LQ+EY+D+ L H
Sbjct: 67 EEGVVKREELFITTKAWTHE------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFN 120
Query: 224 ---KVDPVCPMEELVRVMNYVINEGWVMYWGTARWSPSEIMDA 263
P+E++ R + V G G + W+ +I A
Sbjct: 121 DDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRA 163
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 44.4 bits (100), Expect = 2e-04
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRIL----KK 165
+G ++P GLG W + E + + AL+ G L D AH + E +G++L
Sbjct: 10 TGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLID--TAHLYQNEHIIGKVLHEYISS 67
Query: 166 RNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
++R I +T+K+ ++ + + V + V++ L LQ+EYID+ L+H
Sbjct: 68 GKLKREDIFVTSKLPFTAH------------APEDVPKCVESQLKALQLEYIDLYLIH 113
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 43.2 bits (97), Expect = 5e-04
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 21/118 (17%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGR----ILKK 165
+G P IGLG + ++ ++ + V+ AL G LFD ++ + E E+G +L K
Sbjct: 7 TGYDCPLIGLGTYKIIGDQVLP-VLDAALTAGYRLFDTAKVY--NNEKEIGDALEILLPK 63
Query: 166 RNVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
N++R I ITTK++ +T + DE SL L+ YID+ L+H
Sbjct: 64 HNLKREDIFITTKMHPNTVENVKKLVDE--------------SLSLLKTSYIDMYLIH 107
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 42.3 bits (95), Expect = 8e-04
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 109 KSGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILKKRNV 168
K+G +P + LG + ++ V AL+ G FD ++ + + E +LG LK
Sbjct: 5 KNGQEIPKLALGTYEAKGDQLFA-AVDEALKVGYRSFDTAKYY--ENEKDLGLALKTLLP 61
Query: 169 RRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLHKVDPV 228
R I + IY ++K + + L RK V ES++ L +Y+D+VL+H P+
Sbjct: 62 RHN--ICSEDIYLTSKVFPYSSKNAAELIRKDVNESLEL----LDRKYLDLVLVHYPRPL 115
Query: 229 CPME-----ELVRVMNYVI-----NEGWVMYWGTARWSPSEIMDAYTNCRQFNCITPIVE 278
+ ++ R ++ EG + G + + P I + R + I P V
Sbjct: 116 DTEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEE----MRSYITIEPQVN 171
Query: 279 QTEYHMFCREK 289
Q EYH + K
Sbjct: 172 QIEYHPHFQRK 182
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 39.9 bits (89), Expect = 0.004
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAK---GEAELGRILKKR 166
+G+ +P+IGLG W M EE + V+ A+ G D + + + G+A L + +
Sbjct: 12 NGVLMPSIGLGTWQMTGEEG-KTVIRNAVLAGYRHIDTATLYQNEHQIGDA-LAELFAEG 69
Query: 167 NVRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
++R I ITTK + ++ V E+++ SL RL+++Y+D+ L H
Sbjct: 70 ILKREDIFITTKAFCHE------------VAPDVVEEALRNSLKRLRLDYVDLYLAH 114
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 37.9 bits (84), Expect = 0.017
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALENGINLFD--LSEAHCAKGEAELGRILKKRN 167
SG +P IG G W L + + V ALE G D LS + + A + K R
Sbjct: 11 SGYEMPVIGYGTW-QLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRK 69
Query: 168 VRRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
VRR + +++KI W+T +H+ NR ++ + L + Y+D++++H
Sbjct: 70 VRREELFLSSKI-WNT-YHSRNR----------CMQQIDEMLEIFETTYMDLIVIH 113
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 34.7 bits (76), Expect = 0.16
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 114 VPNIGLGLWTMLSEESIEDVVMTALENGINLFDLSEAHCAKGEAELGRILK----KRNVR 169
+P +GLG W +E+ I V A++NG +L D + + E +G +K + V+
Sbjct: 56 MPAVGLGTWQSNAEDVI-SAVKAAVKNGYSLIDTASGY--NNEEFIGTAIKEVIAEGVVK 112
Query: 170 RTSIIITTKI 179
R + ITTK+
Sbjct: 113 REDLFITTKV 122
>Z81030-7|CAB02711.1| 366|Caenorhabditis elegans Hypothetical
protein C01G10.9 protein.
Length = 366
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 385 STFSWCEEDLAVPEMRSSGSKEQVTGEEPRTY--GDKLRDLANLANSLNCSM-SQLAVAW 441
+T SW + + S + V E R Y G +L + L + + + AW
Sbjct: 186 ATISWGTALGVIRALHSENRLKLVYVLETRPYNQGIRLTSIELLHGEVPFKLITDSMAAW 245
Query: 442 CLKNESVNCLLLGATSVEQFKENIHALQVYI 472
+KN V+C+L GA +V + + + + Y+
Sbjct: 246 AMKNHQVDCVLTGADNVARNGDTANKIGTYM 276
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 30.3 bits (65), Expect = 3.5
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 110 SGLRVPNIGLGLWTMLSEESIEDVVMTALEN-GINLFDLSEAHCAKGEAELGRILKKRNV 168
+ + +P IGLG T S D V+ +++ G L D ++ + E +LG +K +V
Sbjct: 9 NNVEMPLIGLG--TTHSGGYYHDAVLHSIKKCGYRLIDTAKRYGV--EKQLGIAVKNCSV 64
Query: 169 RRTSIIITTKIYWSTKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVVLLH 223
R + ++TK+ W + DE V + + S +LQ +Y+D+ ++H
Sbjct: 65 PREEMFLSTKL-WPV-----DCGDE-------VYNAFQTSCEKLQTDYLDMYMIH 106
>AF026214-1|AAB71313.1| 140|Caenorhabditis elegans Hypothetical
protein F52H2.3 protein.
Length = 140
Score = 29.5 bits (63), Expect = 6.1
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 369 EEITGLFAKSRFNRKYSTFSWCEED--LAVPEMRSSGSKEQVTGEEPR--TYGDKLRDLA 424
E + + RF R++S F CEED L+ E S++Q E R Y LR +
Sbjct: 21 EAVVKMKRLQRFTRQFSIFVHCEEDKLLSSSENAKLRSEKQDENNEERLFKYPGNLRAIK 80
Query: 425 NLANSLNCSMSQLAV 439
N N S+ + V
Sbjct: 81 RKRNISNESIKNVGV 95
>U46671-5|AAA85750.2| 147|Caenorhabditis elegans Hypothetical
protein C14E2.5 protein.
Length = 147
Score = 29.1 bits (62), Expect = 8.1
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 128 ESIEDVVMTALE-----NGINLFDLSEAHCAKGEAELGRILKKRNVRRTSIIITTKIYWS 182
+S D+V TA+E +N S+ + + R+L + S+I K W+
Sbjct: 2 DSDYDIVHTAMEIPTFARALNAEPKSQLFLKENQDSQPRLLVSTAEKNGSVISNFKSSWN 61
Query: 183 TKFHTNNRSDERGLSRKHVIESVKASLGRLQVEYIDVV 220
+ +N S + +S+ V +S L L EY+ ++
Sbjct: 62 HYYIEDNSSSDENISQTTVFDSESCRLDDL-AEYVQML 98
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,013,163
Number of Sequences: 27539
Number of extensions: 549647
Number of successful extensions: 1133
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1119
Number of HSP's gapped (non-prelim): 20
length of query: 529
length of database: 12,573,161
effective HSP length: 85
effective length of query: 444
effective length of database: 10,232,346
effective search space: 4543161624
effective search space used: 4543161624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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