Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000684-TA|BGIBMGA000684-PA|IPR001611|Leucine-rich
repeat, IPR003591|Leucine-rich repeat, typical subtype
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 53 1e-07
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 39 0.002
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 39 0.002
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 36 0.015
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 33 0.080
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 32 0.24
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 31 0.43
SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 31 0.56
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 30 0.98
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 1.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 28 4.0
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 28 4.0
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 27 5.3
SPAC824.03c |||conserved fungal protein|Schizosaccharomyces pomb... 27 6.9
SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyc... 27 6.9
SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces... 27 9.2
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 27 9.2
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 27 9.2
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 27 9.2
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 27 9.2
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 52.8 bits (121), Expect = 1e-07
Identities = 73/332 (21%), Positives = 132/332 (39%), Gaps = 32/332 (9%)
Query: 106 LQNLRVLNLTHNNLTSVVADNFRGLINLTELHLDHNHIEQMSSETFRHLTSLKTLILANN 165
L L LN +HN L S ++ L+ L L+L N + + L +L+T+ L+ N
Sbjct: 547 LSQLETLNFSHN-LLSQISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYN 605
Query: 166 QISTLVS-------RLFRMLAKL-----------SILDLSDNPLTDLNPEVFKDIQHLRI 207
I+ + S + L + +D S PLT ++P +L
Sbjct: 606 AITNIASLSECPKLNSINVACNLLSFYEYSNPSATFIDFSFCPLTTIDPAF--SYSNLVY 663
Query: 208 FKCRRCLLRRINTQIYHLVPRLEELDLGENLFKYLTSDEFISLKRLKKLKLDGNQLSVIV 267
F L + + + +E + + N F + SD +++ LK L ++S +
Sbjct: 664 FDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSI-SDAISAMQNLKYLSCTNCEMSYVS 722
Query: 268 DNMFGRNRELHVLTLSRNRXXXXXXXXXXXXXXXXXXDISHNKIDRFHL-----QTFAPV 322
N+ G+ + L L L N ++S N +++ L +
Sbjct: 723 PNL-GKLKHLVHLDLHANNIKIFPEEVWQVSSLKVV-NLSSNILEKIKLPVATSKKLTRT 780
Query: 323 VDSLKTIN-FSGNNLPLNEIAIVLQILPEIHGVGLANLSLQEIPQNFFTYNEHLVALDLS 381
+ LK + SGN P++ ++ ++P + + L + L Y + L L+LS
Sbjct: 781 ISQLKIMRTLSGN--PVSSLSSQEFVMPTVEELYLVDNRLGNDCFTALEYFKCLKVLNLS 838
Query: 382 WNKLSRFPFKLLSKTKFLQRLDISHNKLQTLS 413
+N L+ P K L+ L +S N+L LS
Sbjct: 839 YNYLTEIPSKFFQNFSDLKHLFVSGNELANLS 870
Score = 38.7 bits (86), Expect = 0.002
Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 18/306 (5%)
Query: 112 LNLTHNNLTSVVADNFRGLINLTELHLDHNHIEQMSSETFRHLTSLKTLILANNQISTLV 171
L+++ +NL + + L L++ HN + + LK L ++NN + +
Sbjct: 410 LDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNN-LRSPR 468
Query: 172 SRLFRMLAKLSILDLSDNPLTDLNPEVFKDIQH--LRIFKCRRCLLRRINTQIYHLVPRL 229
+ L +L +L++S N + +L+P +F + L+ L + +LV L
Sbjct: 469 GKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLV-NL 527
Query: 230 EELDLGENLFKYLTSDEFIS-LKRLKKLKLDGNQLSVIVDNMFGRNRELHVLTLSRNRXX 288
LDL N ++T I+ L +L+ L N LS I + G +L L L N
Sbjct: 528 TYLDLSYN--NFVTFPLIITELSQLETLNFSHNLLSQI-SSKIGSLVKLKHLYLQFNDLS 584
Query: 289 XXXXXXXXXXXXXXXXDISHNKIDRFHLQTFAPVVDSLKTINFSGNNLPLNEIAIVLQIL 348
D+S+N I + P L +IN + N L E +
Sbjct: 585 NRLPQEIGLLKNLETIDLSYNAITNIASLSECP---KLNSINVACNLLSFYEYS-----N 636
Query: 349 PEIHGVGLANLSLQEIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTKFLQRLDISHNK 408
P + + L I F+Y+ +LV D+S KL ++ ++ + +++N
Sbjct: 637 PSATFIDFSFCPLTTI-DPAFSYS-NLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNH 694
Query: 409 LQTLSE 414
++S+
Sbjct: 695 FTSISD 700
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 356 LANLSLQEIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTKFLQRLDISHNKLQTLSEQ 415
++ +L+ IP + Y L++L++S N P + + L+RLDIS+N L++ +
Sbjct: 412 ISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNN-LRSPRGK 470
Query: 416 DLQRLEAIAEVNLMKNN 432
+ L + +N+ +N+
Sbjct: 471 PITALRQLEVLNMSRND 487
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 39.1 bits (87), Expect = 0.002
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Query: 82 FVNLRELHIVNSNVPSIGQFSFWGLQN--LRVLNLTHNNLTSVVADNFRGLINLTELHLD 139
F L++L +++ I QF + LR L ++HN LTS L NL L +
Sbjct: 188 FEKLQKLSLLSIQSNRITQFENLACLSHCLRELYVSHNGLTSF--SGIEVLENLEILDVS 245
Query: 140 HNHIEQMSSETFRHLTSLKTLILANNQISTL--VSRLFRMLAKLSILDLSDNPLTDLNPE 197
+N I+ +S L +L L +NN++S+ + L KL + NPL NP
Sbjct: 246 NNMIKHLSY--LAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQKTNPA 303
Query: 198 VFKDIQHLRIFKCRRCL--LRRINTQI 222
V+++ K R CL LR+I+ I
Sbjct: 304 VYRN-------KVRLCLPQLRQIDATI 323
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 38.7 bits (86), Expect = 0.002
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 31/298 (10%)
Query: 131 INLTELHLDHNHIEQMSSETFRHLTSLKTLILANNQISTLVSRLFRMLAKLSILDLSDNP 190
+ + +L+ N + ++S F +L +L+ L ++ NQ+ L L L L + N
Sbjct: 646 VTIRDLNAVENRLSSLTS--FSNLLNLQYLDISYNQLEDLTG--LSSLIHLRELKVDSNH 701
Query: 191 LTDLNPEVFKDIQHLR-IFKCRRCLLRRINTQIYHL-VPRLEELDLGENLFKYLTSDEFI 248
L L+ IQHL + K C R + + RLEEL LG N + + +E
Sbjct: 702 LWSLD-----GIQHLDGLLKLSACNNRIKELSFTNSNLHRLEELLLGNNEIEEI--EEIS 754
Query: 249 SLKRLKKLKLDGNQLSVIVDNMFGRNRELHVLTLSRNRXXXXXXXXXXXXXXXXXX---- 304
SL+ L L+LD N+L+ + + L +L +S N
Sbjct: 755 SLQNLMVLQLDNNKLTNLKASQ--PMIHLRILRISNNAIHQLEVDQFPHLRTLYMDLNRF 812
Query: 305 ----DISHNK-IDRFHLQTFAPVVDSLKTI-NFSGNNLPL-NEIAIVLQILPEIHGVG-- 355
DI K + F +T P + + NL L N + L GV
Sbjct: 813 NRPPDIRRLKRLVNFSFRTQDPEASNFVIQPSLDIRNLYLSNNTFVTLDCKHMFLGVRYL 872
Query: 356 -LANLSLQEIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTKFLQRLDISHNKLQTL 412
LAN+ L+E+P+ T +L LDLS N +S + L + + RL + N+++ +
Sbjct: 873 ELANVQLKEVPKYIATSMPNLRVLDLSHNYIS--DIESLKPLQMIHRLYLVGNRIKKM 928
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 82 FVNLRELHIVNSNVPSIGQFSFWGLQNLRVLNLTHNNLTSVVADNFRGLINLTELHLDHN 141
F+ +R L + N + + ++ + NLRVL+L+HN ++ + ++ + L + L+L N
Sbjct: 866 FLGVRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI--ESLKPLQMIHRLYLVGN 923
Query: 142 HIEQMSS--ETFRHLTSLKTLILANNQIS 168
I++M + + +L L L L N ++
Sbjct: 924 RIKKMRNLCDILANLKQLNVLDLRMNPLN 952
Score = 30.3 bits (65), Expect = 0.75
Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 17/199 (8%)
Query: 225 LVPRLEELDLGENLFKYLTSDEFISLKRLKKLKLDGNQLSVIVDNMFGRNRELHVLTLSR 284
L P +EEL L N YLT ++++ L ++ N+LS + F L L +S
Sbjct: 624 LCPSIEELTLEGNEIAYLTGCP-VTIRDLNAVE---NRLSSLTS--FSNLLNLQYLDISY 677
Query: 285 NRXXXXXXXXXXXXXXXXXXDISHNKIDRFHLQTFAPVVDSLKTINFSGNNLPLNEIAIV 344
N+ + K+D HL + + + S N + E++
Sbjct: 678 NQ-------LEDLTGLSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLSACNNRIKELSFT 730
Query: 345 LQILPEIHGVGLANLSLQEIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTKFLQRLDI 404
L + + L N ++EI + + ++L+ L L NKL+ K L+ L I
Sbjct: 731 NSNLHRLEELLLGNNEIEEIEE--ISSLQNLMVLQLDNNKLTN--LKASQPMIHLRILRI 786
Query: 405 SHNKLQTLSEQDLQRLEAI 423
S+N + L L +
Sbjct: 787 SNNAIHQLEVDQFPHLRTL 805
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 35.9 bits (79), Expect = 0.015
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 357 ANLSLQEIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTKFLQRLDISHNKL 409
++ L+ IP+N F + LV+LDLS N+L+ P+ L + L L+++ NK+
Sbjct: 340 SSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPY-ALGELPQLCSLNLASNKI 391
Score = 31.9 bits (69), Expect = 0.24
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 323 VDSLKTINFSGNNLPLNEIAIVLQILPEIHGVGLANLSLQEIPQNFFTYNEHLVALDLSW 382
+ SL +++ SGN L EI L LP++ + LA+ + + HL L LS
Sbjct: 355 LQSLVSLDLSGNEL--TEIPYALGELPQLCSLNLASNKITGCRTFYHISLSHLQILVLSR 412
Query: 383 NKLSRFPFKLLSKTKFLQRLDISHNKLQTLSE 414
N L+ L L++LDI N + + E
Sbjct: 413 NHLT--SLSGLENVPSLEKLDIRDNSITDVVE 442
Score = 28.7 bits (61), Expect = 2.3
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 106 LQNLRVLNLTHNNLTSVVADNFRGLINLTELHLDHNHIEQMSSETFRHLTSLKTLILANN 165
L L LNL N +T L +L L L NH+ +S ++ SL+ L + +N
Sbjct: 378 LPQLCSLNLASNKITGCRTFYHISLSHLQILVLSRNHLTSLSG--LENVPSLEKLDIRDN 435
Query: 166 QISTLVSRLFRMLAKLSILD---LSDNPLT 192
I+ +V FR L + + LS NP T
Sbjct: 436 SITDVVE--FRRLVGNTNFEEAYLSLNPFT 463
Score = 27.9 bits (59), Expect = 4.0
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 146 MSSETFRHLTSLKTLILANNQISTLVSRLFRMLAKLSILDLSDNPLTDLNPEVFKDIQHL 205
+SS ++ L L+ ++ ++ ++ +F L L LDLS N LT++ P ++ L
Sbjct: 326 LSSSSWSQLLYLRC---SSCKLKSIPKNVFLSLQSLVSLDLSGNELTEI-PYALGELPQL 381
Query: 206 RIFKCRRCLLRRINTQIYHL-VPRLEELDLGENLFKYLTSDEFISLKRLKKLKLDGNQLS 264
+ T YH+ + L+ L L N L+ E ++ L+KL + N ++
Sbjct: 382 CSLNLASNKITGCRT-FYHISLSHLQILVLSRNHLTSLSGLE--NVPSLEKLDIRDNSIT 438
Query: 265 VIVD 268
+V+
Sbjct: 439 DVVE 442
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 33.5 bits (73), Expect = 0.080
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 108 NLRVLNLTHNNLTSVVADNFRGLINLTELHLDHN-HIEQMSSETFRHLTSLKTLILANNQ 166
+L VL L N + A +F+ L L L L +N ++ + L L++
Sbjct: 218 SLEVLYLEANEIILSKATSFKNLQFLQTLSLANNLNLYSADGYAVDVFQGINNLNLSSTS 277
Query: 167 ISTLVSRLFRMLAKLSILDLSDNPLTDLNP----EVFKDIQHLRI 207
++ + L KL+ LD+S+N + D+ ++++HLRI
Sbjct: 278 LADVAELPVHTLHKLTFLDISENNIRDIRSLDHLRTLENLKHLRI 322
Score = 28.3 bits (60), Expect = 3.0
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 75 IFTQPAPFVNLRELHIV----NSNVPSIGQFSFWGLQNLRVLNLTHNNLTSVVADNFRGL 130
I ++ F NL+ L + N N+ S ++ Q + LNL+ +L V L
Sbjct: 230 ILSKATSFKNLQFLQTLSLANNLNLYSADGYAVDVFQGINNLNLSSTSLADVAELPVHTL 289
Query: 131 INLTELHLDHNHIEQMSS-ETFRHLTSLKTLILANNQIS--TLVSRLFRMLAKLSILDLS 187
LT L + N+I + S + R L +LK L + + + T +++L + S++ L+
Sbjct: 290 HKLTFLDISENNIRDIRSLDHLRTLENLKHLRITLSYFNKPTDIAKLLVIARIPSLVKLN 349
Query: 188 D 188
D
Sbjct: 350 D 350
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 31.9 bits (69), Expect = 0.24
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 193 DLNPEVFKDIQHLRIFKCRRCLLRRINTQIYHLVPRLEELDLGENLFKY--LTSDEFISL 250
D+NPE + L R LLRR+ T++ +P E + L K D+FI+
Sbjct: 656 DMNPEAMNTVAKLHRV-LRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINR 714
Query: 251 KRLKKLKLDGNQLSVI 266
R +++ GN +S+I
Sbjct: 715 ARTREILASGNFMSII 730
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 31.1 bits (67), Expect = 0.43
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 112 LNLTHNNLTSVVADNFRGLINLTELHLDHNHIEQMSSETFRHLTSLKTLILANNQISTLV 171
L+L L +V D F+ LTEL+++HN++ ++ E + L +L L + N I T+
Sbjct: 163 LDLGGIGLRNVSTDLFKFSF-LTELYINHNNLTRLPPEIGK-LKNLVILDASGNSIKTIP 220
Query: 172 SRLFRMLAKLSILDLSDNPLTDLNPEV 198
L +L +L + L DN ++ + E+
Sbjct: 221 PEL-GLLTELREVLLFDNMISVIPAEL 246
>SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 283
Score = 30.7 bits (66), Expect = 0.56
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 432 NWHCDQCSASNMLLYMTTTVLNSTIRVLKCHSPLR--LRGATFGSLSFEQLDPCPTTHEA 489
+W C+ + Y+ T N T + C+S LR GAT ++ ++ C T+++
Sbjct: 190 DWSCNMTLCNTDYPYLVNTCFNGTQYPVNCNSALRTPFGGATCRNIGYKGQGICVYTNDS 249
Query: 490 QMSV 493
++ V
Sbjct: 250 RIPV 253
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 29.9 bits (64), Expect = 0.98
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 151 FRHLTSLKTLILANNQISTLVSRLFRMLAKLSILDLSDNPLTDL 194
F + L+TL+ NN+I+ + + ++L L L L+ N L ++
Sbjct: 59 FPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEI 102
Score = 28.3 bits (60), Expect = 3.0
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 106 LQNLRVLNLTHNNLTSVVAD-----NFRGLINLTELHLDHNHIEQMSSETFRHLTSLKTL 160
++NL VL H+ + D NF + L L +N I ++ + + L +LKTL
Sbjct: 33 IENLGVLRDVHDAIDFTDNDIRYLGNFPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTL 92
Query: 161 ILANNQISTLVS-RLFRMLAKLSILDLSDNPL 191
LA N + + +L+ L DNP+
Sbjct: 93 SLAQNHLQEIADLDPLASCPQLTNLSCIDNPV 124
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 105 GLQNLRVLNLTHNNLTSVVADNFRGLINLTELHLDHNHIEQMSSETFRHLTSLKT-LILA 163
G +L + NL ++L ++DN + L L EL +++ +EQ S++ L SL+ L
Sbjct: 860 GKLSLDLKNL-RSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLL 918
Query: 164 NNQISTLVSRLFRMLAKLSILDLSDNPL 191
+ + L RL ++ KL I + + L
Sbjct: 919 HTENEELHIRLDKLTGKLKIEESKSSDL 946
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 212 RCLLRRINTQIYHLVPRLEELDLGENLFKYLTSDEFISLKRLKKLKLDGNQLSVIVDNMF 271
R L ++ L+ + E++D E + L D S + L+ KL+ L ++DN+
Sbjct: 664 RTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLK 723
Query: 272 GRNREL 277
G++ L
Sbjct: 724 GKHETL 729
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 90 IVNSNVPSIGQFSFWGLQNLRVLNLTHN 117
I+ S+ P IG SFW L R+ N+T+N
Sbjct: 260 ILASSNP-IGDLSFWDLSKRRIQNVTYN 286
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 135 ELHLDHNHIEQMSSETFRHLTSLKTLILANNQISTLVSRL----FRMLAKLSILDLSDNP 190
EL D N+ ++F+ L TL+L + +ST VS+L ++ + + L++ +
Sbjct: 523 ELVADLNYRLDYLRKSFQ--PELSTLLLRRDALSTTVSKLQNAYSTVMEETAYLNVKNTE 580
Query: 191 LTDLNPEVFKDIQHLR 206
L LN ++ +++ +LR
Sbjct: 581 LVSLNNQLERELAYLR 596
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 116 HNNLTSVVADNFRGLINLTELHLDHNHIEQMS 147
H+NL SV+A + LIN+ +L+ N +S
Sbjct: 242 HSNLASVLATTYEALINMHTAYLEINQSINLS 273
>SPAC824.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 90 IVNSNVPSIGQFSFW--GLQNLRVLNLTHNNLTS 121
I+ S FSF GL LR L++THNNL S
Sbjct: 3 ILKSGFNRCRNFSFMNRGLLGLRNLSVTHNNLVS 36
>SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 306 ISHNKIDRFHLQTFAPVVDSLKTINFSGNNLPLNEIAIVL 345
++HN + +H T PV D + +F N+LP+ +++
Sbjct: 294 LAHNYLAPYHDPTDEPVADEVFDWSFQDNDLPVETWKVMM 333
>SPCC1393.06c |||rRNA processing protein Ipi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 9.2
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 7/128 (5%)
Query: 119 LTSVVADNFRGLINLTELHLDHNHIEQMSSET--FRHLTSLKTLILANNQISTLVSRLFR 176
LT + + L+ T+ L+ + + F HL + AN + TL
Sbjct: 25 LTDFLETKTQALVLPTQAALEKEDFNTTAKDQAYFAHLLGMLKHHNANQRQETLEKLTQY 84
Query: 177 MLAKLSILDLSDNPLTDLNPEVFKDIQHLRIFKCRRCLLRRINTQIYHLVPRLEELDLGE 236
+L+ SIL S L L + D R CL R + IY + P L E ++G
Sbjct: 85 VLSHTSILTTSTALLLKLTSPLILDESS----SVRDCLYRFLEKFIYIMGPELLEPNIG- 139
Query: 237 NLFKYLTS 244
+F Y S
Sbjct: 140 MIFLYTHS 147
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 26.6 bits (56), Expect = 9.2
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 137 HLDHNHIEQMSSETFRHLTSLKTLILANNQ-------ISTLVSRLFRM---LAKLSILD- 185
H+++ H+E+ + + LK L+ AN + + L LFR L LS++
Sbjct: 654 HVEYCHMEETQLSLYLSVLELKNLVNANRENILMQLRKAALHQLLFRSQYNLETLSLMSK 713
Query: 186 --LSDNPLTDLNPE-VFKDIQHLRIFKCRRCLLRRINTQIYHLVP 227
L ++ D NP+ +F+D++ + F+ L ++ Q HL P
Sbjct: 714 RILREDAYLDANPQYIFEDMEVMSDFE-----LHKLADQYRHLHP 753
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 26.6 bits (56), Expect = 9.2
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 185 DLSDNPLTDLNPEVFK-DIQHLRIFKCRRCLLRRINTQIYHLVPRLEELDLGENLFKYLT 243
D S +T E FK D+++L F + +N + + + L LG+N+ +YL
Sbjct: 657 DPSIRKVTTAAAEGFKLDVEYLESFAAQVPDQSIVNADSFIELRQCANLLLGDNMEEYLD 716
Query: 244 SDEFI 248
+D+F+
Sbjct: 717 TDKFM 721
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 378 LDLSWNKLSRFPFKLLSKTKFLQRLDISHNKLQTLSE 414
L++ N L FP + L + + L+ LDIS NK++ L E
Sbjct: 80 LNIRSNVLREFP-ESLCRLESLEILDISRNKIKQLPE 115
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 363 EIPQNFFTYNEHLVALDLSWNKLSRFPFKLLSKTK 397
E P +F N+H V S N LS P LLS K
Sbjct: 602 EFPMSFTHLNDHAVKYGPSENTLSLIPELLLSPIK 636
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.136 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,380,847
Number of Sequences: 5004
Number of extensions: 95138
Number of successful extensions: 284
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 251
Number of HSP's gapped (non-prelim): 36
length of query: 563
length of database: 2,362,478
effective HSP length: 76
effective length of query: 487
effective length of database: 1,982,174
effective search space: 965318738
effective search space used: 965318738
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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