GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000683-TA|BGIBMGA000683-PA|IPR001715|Calponin-like
actin-binding
         (367 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.28 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   1.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   6.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query: 153  VLRAVNRVLYGTSKPVPK 170
            +LR +NRVL G +KP PK
Sbjct: 2181 LLRTINRVLRGYAKPDPK 2198


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 267 VNKHLSKVNLEVMDLDTQFHDGVYLCLLMGLLEEFFVPLYDFHLTPQDFDQKV 319
           ++K  ++ N+ V DL     D   L +  G+ E       D HL  +DFDQKV
Sbjct: 13  LDKKGAEQNILVYDLGGGTFDVSILTIDNGVFE-VVATSGDTHLGGEDFDQKV 64


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 275 NLEVMDLDTQFHDGVYLC 292
           N ++++L+ +FH   YLC
Sbjct: 13  NTQLLELEKEFHFNKYLC 30


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 275 NLEVMDLDTQFHDGVYLC 292
           N ++++L+ +FH   YLC
Sbjct: 144 NTQLLELEKEFHFNKYLC 161


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 56  PTAPEIPPEEY 66
           PT P+IPP E+
Sbjct: 209 PTVPKIPPAEF 219


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 56  PTAPEIPPEEY 66
           PT P+IPP E+
Sbjct: 209 PTVPKIPPAEF 219


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,430
Number of Sequences: 317
Number of extensions: 3011
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 6
length of query: 367
length of database: 114,650
effective HSP length: 58
effective length of query: 309
effective length of database: 96,264
effective search space: 29745576
effective search space used: 29745576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)