Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000683-TA|BGIBMGA000683-PA|IPR001715|Calponin-like
actin-binding
(367 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 36 0.007
SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 28 1.8
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 27 3.2
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 27 3.2
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 4.2
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.3
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 26 7.3
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 7.3
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 7.3
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 26 9.7
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 26 9.7
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 36.3 bits (80), Expect = 0.007
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 258 VVKKSLITFVNKHLSKVNL-EVMDLDTQFHDGVYLCLLMGLLEEFFVPLYDFHLTPQDFD 316
V ++ + N LS +L V DL DG+ L L+ ++ + + Y+ + P+
Sbjct: 9 VQNRTFTKWFNTKLSSRDLPSVFDLRKDLSDGILLIQLLEIIGDENLGRYNRN--PRMRV 66
Query: 317 QKVHNVSFAFELMQDVGLGKPKARPEDIVNLDLKSTLRVLYNLFTKY 363
++ NV+ A E ++ G+ P DIV+ +LK L +++ L ++
Sbjct: 67 HRLENVNKALEYIKSKGMPLTNIGPADIVDGNLKLILGLIWTLILRF 113
>SPBC947.15c |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 235 DLGMKCERDAFDALFDHAPDKLLVVKKSLITFVNKHLSKVNLEVM 279
D+ + ++D L + AP L + KSLIT+ +N+++M
Sbjct: 283 DMFPELQKDIHVTLIEAAPGVLPMFTKSLITYTENLFKNLNIKIM 327
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 254 DKLLVVKKSLITFVNKHLSKVNLEVMDLDTQFHDGVYLCLLM 295
D L +K L+ N H+ + + L F G YLCL+M
Sbjct: 565 DSLKKIKGLLLEKRNMHIQRYGPNTVKLYYAFDSGDYLCLVM 606
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 259 VKKSLITFVNKHLSKVNLEVMDLDTQFHDGVYL 291
+ KS + F H +KVNLE++ DG Y+
Sbjct: 334 IAKSELEFYGSHKAKVNLEILQRLAHRRDGHYV 366
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 43 QAEGKYAIDSPGSPTAPEIPPEEYT---LNENEERAIIEPRSLEDPRVRDLIQVLI 95
Q G Y+ +PG+P P+ P E+ +N+ + + IE +L R L Q ++
Sbjct: 485 QPSGYYSSGAPGAPVQPQKPIEDLNKIPINQGMDSSQIENTNLMLSSQRPLSQQIV 540
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 302 FVPLYDFHLTPQDFDQKVHNVSFA 325
F +DF LTP F + +H VSF+
Sbjct: 2057 FETTFDFVLTPAAFSRFLHRVSFS 2080
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 227 ETITTTY-DDLGMKCERDAFDALFDHAP 253
ET+ + Y D+LGM+C F L D AP
Sbjct: 647 ETLRSRYLDELGMRCRNQLFSRL-DQAP 673
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 57 TAPEIPPEEYTLNENEERAI 76
+AP I PEEYT +E + RA+
Sbjct: 523 SAPYIAPEEYTESEFDPRAV 542
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.2 bits (55), Expect = 7.3
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 55 SPTAPEIPPEEY-TLNENEERAIIEPRSLEDPRVRDLIQVLIDWINDELASQRIIVQDII 113
+P+AP PP+EY LN + + ++ L+ + ++ +D I E SQ I ++I
Sbjct: 166 NPSAPPPPPQEYRQLNVTDALSYLDLVKLQFHQEPEIYNEFLD-IMKEFKSQAIETPEVI 224
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 46 GKYAIDSPGSPTAPEIPPEEYTLNENEERAIIEPRSLEDPRVRDLIQVLIDWINDELASQ 105
GK + G + E +Y NE A + R+ E+P+++ ++ + ++ D Q
Sbjct: 540 GKEISEMDGEDVS-EFSDSDYDTNEQVSTAFEKIRNEEEPKLKGVLG--MKFMRDASNRQ 596
Query: 106 RIIVQDIIEDLYD 118
+ +VQD ++ D
Sbjct: 597 KALVQDEMQAFED 609
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 9.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 225 LIETITTTYDDLGMKCERDAFD--ALFDHAPDKLL--VVKKSLITFVNKHLSKVNLEVMD 280
L+ T YDD+G + D FD A+F +L + KK + +VN + + LE +
Sbjct: 127 LLRIPTVCYDDMGDVGDDDRFDIFAVFQDKVRELYPNIFKKLKVEYVNTYGLLITLEGSN 186
Query: 281 LD 282
D
Sbjct: 187 KD 188
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.137 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,612,211
Number of Sequences: 5004
Number of extensions: 63629
Number of successful extensions: 166
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 160
Number of HSP's gapped (non-prelim): 11
length of query: 367
length of database: 2,362,478
effective HSP length: 74
effective length of query: 293
effective length of database: 1,992,182
effective search space: 583709326
effective search space used: 583709326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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