GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000683-TA|BGIBMGA000683-PA|IPR001715|Calponin-like
actin-binding
         (367 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    28   0.47 
DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.        25   2.5  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 258 VVKKSLITFVNKHLSKVNLEVMD 280
           VVK+S   F+ KH+ K +L ++D
Sbjct: 10  VVKESFFHFIRKHIPKADLSIVD 32


>DQ013847-1|AAY40256.1|   93|Anopheles gambiae CYP325A3 protein.
          Length = 93

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 148 QKLTI-VLRAVNRVLYGTSKPVPKWSVDSIHSK 179
           QK+ + V R VN +LYG  + + K  +++ HS+
Sbjct: 1   QKMKVKVERVVNPILYGRREKLSKQRLENAHSE 33


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,982
Number of Sequences: 2123
Number of extensions: 12720
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 2
length of query: 367
length of database: 516,269
effective HSP length: 65
effective length of query: 302
effective length of database: 378,274
effective search space: 114238748
effective search space used: 114238748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)