GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000683-TA|BGIBMGA000683-PA|IPR001715|Calponin-like
actin-binding
         (367 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   2.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.1  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 42  VQAEGKYAIDSPGSPTAPEIPPE 64
           V  E  + +     PTAP IPPE
Sbjct: 90  VADENGFQVQGSHIPTAPPIPPE 112


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 150 LTIVLRAVNRVLYGTSKPVPKWSVDSIHSKSIVSILHLL 188
           L I  + +  V+ GT K   K  + S H  +I S+LH L
Sbjct: 230 LRIFTKHMLDVVSGTQKKKRKIYLFSGHESNIASVLHAL 268


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 150 LTIVLRAVNRVLYGTSKPVPKWSVDSIHSKSIVSILHLL 188
           L I  + +  V+ GT K   K  + S H  +I S+LH L
Sbjct: 245 LRIFTKHMLDVVSGTQKKKRKIYLFSGHESNIASVLHAL 283


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.137    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,504
Number of Sequences: 429
Number of extensions: 3839
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 367
length of database: 140,377
effective HSP length: 59
effective length of query: 308
effective length of database: 115,066
effective search space: 35440328
effective search space used: 35440328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)