Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000682-TA|BGIBMGA000682-PA|IPR013753|Ras, IPR003577|Ras
small GTPase, Ras type, IPR003579|Ras small GTPase, Rab type,
IPR003578|Ras small GTPase, Rho type
(151 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 102 1e-22
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 94 5e-20
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-20
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 89 1e-18
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 89 2e-18
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 87 8e-18
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 85 2e-17
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 85 3e-17
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 4e-17
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 84 4e-17
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 2e-16
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 78 3e-15
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 4e-15
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 73 1e-13
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 71 5e-13
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 70 9e-13
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-12
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 68 3e-12
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 65 3e-11
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 63 8e-11
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 62 1e-10
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 62 3e-10
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 61 3e-10
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 3e-10
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 61 4e-10
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 60 6e-10
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 59 1e-09
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 57 7e-09
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 56 2e-08
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 56 2e-08
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 55 3e-08
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 55 3e-08
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 53 9e-08
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 51 4e-07
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 51 5e-07
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 50 6e-07
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 50 1e-06
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 48 3e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 48 4e-06
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 46 1e-05
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 46 1e-05
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 45 2e-05
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 44 5e-05
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 44 7e-05
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 43 9e-05
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 42 2e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 2e-04
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 42 3e-04
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 40 7e-04
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 40 7e-04
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 40 9e-04
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 39 0.002
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 38 0.003
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 38 0.003
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 37 0.006
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.011
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.033
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.033
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 34 0.044
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.044
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 33 0.076
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 33 0.076
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.10
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 32 0.18
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 31 0.31
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 31 0.31
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 31 0.31
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 31 0.41
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.54
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 31 0.54
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.71
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 30 0.71
SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.71
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.71
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 30 0.94
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 30 0.94
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 30 0.94
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 0.94
SB_27497| Best HMM Match : Death (HMM E-Value=0.028) 29 1.2
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 29 1.6
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 29 1.6
SB_33177| Best HMM Match : Beach (HMM E-Value=0) 28 2.9
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 28 3.8
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 28 3.8
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 28 3.8
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 6.6
SB_17664| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 27 8.8
SB_35147| Best HMM Match : rve (HMM E-Value=0.019) 27 8.8
SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) 27 8.8
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 27 8.8
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 102 bits (245), Expect = 1e-22
Identities = 44/97 (45%), Positives = 69/97 (71%)
Query: 4 TTGGARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSI 63
T G K+VLLG+ VGK+SL+LR+++ +F+E +T+ A FL + + ++ V I
Sbjct: 15 TMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 64 WDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRK 100
WDTAGQE++H+L P+YYR + AI+VYDIT++D+F +
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFAR 111
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 93.9 bits (223), Expect = 5e-20
Identities = 37/87 (42%), Positives = 62/87 (71%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K++L+GD VGK+SLLLR+ +D F+ +++T+ F + L ++G + L IWDTAGQE+
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSF 98
F L YYR+++G +L+YD+ + ++F
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETF 96
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 93.9 bits (223), Expect = 5e-20
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQE 70
LK++++G+ VGK+SLLLR+ +D F+ T+ F K L + GN+ L+IWDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSFRK 100
+F L P YYR + G ILVYD ++F K
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDK 98
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/88 (45%), Positives = 58/88 (65%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K++++G+ VGKTS L RY +D F ++T+ F K + N RV L IWDTAGQE+
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSFR 99
+ + YYR + G IL+YDIT+E+SF+
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQ 110
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K+VL+GD VGK+SLL R+ ++F+ + +T+ F + + + G + +WDTAGQE+
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLERQEHNTQTEV 125
+ A+ YYR + GA+LVYD+T + +F+ D+ R +LE +EH T V
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQ--------DVERWLLEVREHADPTIV 119
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 86.6 bits (205), Expect = 8e-18
Identities = 37/87 (42%), Positives = 63/87 (72%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
KV++LGD VGK+SL+ R+ +D+FN + TT+ F +++G +V L +WDTAG+EK
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSF 98
+ AL ++R ++GA+LV+D++ ++SF
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESF 98
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 85.4 bits (202), Expect = 2e-17
Identities = 39/88 (44%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGN-RVNLSIWDTAGQE 70
+++L+GD VGK+SLL ++ E +F E T+ F + L + G+ R+ L IWDTAGQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSF 98
+F ++ YYRN+ G +++YDIT+ DSF
Sbjct: 75 RFRSITYSYYRNTVGCLIIYDITNRDSF 102
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 84.6 bits (200), Expect = 3e-17
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R K+VL GD VGK+S +LR ++F+ +TL F K L ++G L +WDTAG
Sbjct: 441 RMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAG 500
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
QE+F ++ Y+R ++G +L+YD+T E SF
Sbjct: 501 QERFRSIAKSYFRKADGVLLLYDVTCETSF 530
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 84.2 bits (199), Expect = 4e-17
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 8 ARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTA 67
A+ K++++GD VGKT L R KF E+ TT+ F K L +NG V L +WDTA
Sbjct: 44 AKTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTA 103
Query: 68 GQEKFH-ALGPIYYRNSNGAILVYDITDEDSF 98
GQE+F ++ YYRN N + +YDIT + SF
Sbjct: 104 GQERFRKSMVCHYYRNVNAVVFMYDITRKCSF 135
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 84.2 bits (199), Expect = 4e-17
Identities = 36/90 (40%), Positives = 56/90 (62%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R KVV +GD VGK+S L R+ D++ T+ F K +N+NG + + +WDTAG
Sbjct: 895 RVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAG 954
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
QE+F ++ Y+R ++G ++ YD+T E SF
Sbjct: 955 QERFRSITKQYFRKADGILIFYDVTAESSF 984
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/87 (41%), Positives = 57/87 (65%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K++L+GD VGKT L+ ++ + F T+ F K ++++G +V L IWDTAGQE+
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSF 98
F ++ YY N++G I+ YDIT++ SF
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSF 95
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 83.0 bits (196), Expect = 1e-16
Identities = 39/89 (43%), Positives = 59/89 (66%)
Query: 10 NLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQ 69
+ KV+++GD VGKTSL+ R+ + F + +T+ + L+I+G+RV L WDTAGQ
Sbjct: 11 SFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQ 70
Query: 70 EKFHALGPIYYRNSNGAILVYDITDEDSF 98
EKF + YYRN++ ILV+DIT+ +F
Sbjct: 71 EKFRGITQSYYRNADAVILVFDITNRGTF 99
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 82.2 bits (194), Expect = 2e-16
Identities = 41/87 (47%), Positives = 56/87 (64%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K+V LGD VGK+SL R+I D F EK+ T+ F+ K + ++ V L IWDTAGQE+
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSF 98
F L Y R+S A++V+DIT+ SF
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSF 251
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 11/99 (11%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRL-----------NINGNRV 59
+K + LGD VGKTSLL +Y + FN + + T+ F KR+ + G R+
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 60 NLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
+L +WDTAGQE+F +L ++R++ G +LV+D+T E SF
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSF 205
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 77.8 bits (183), Expect = 4e-15
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 15 LLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEKFHA 74
L DG VGK+SL+ R++ KF+ + T+ FLNK + ++G L IWDTAGQE+F +
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 75 LGPIYYRNSNGAILVYDITDEDSF 98
L +YR S+ +LVY + D SF
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSF 299
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 74.9 bits (176), Expect = 3e-14
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 22/125 (17%)
Query: 12 KVVLLGDGCVGKTSLLLRYI---------------------EDKFNEKHLTTLQATFLNK 50
K++L+GD VGK+ LLLR+ +D + E +++T+ F +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 51 RLNINGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLT 110
+ ++G + L IWDTAGQE+F + YYR ++G I+VYD+TD++SF V++ ++
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESF-NNVKQWLQEID 128
Query: 111 REMLE 115
R E
Sbjct: 129 RYACE 133
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 72.5 bits (170), Expect = 1e-13
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 35 FNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITD 94
F+ ++TT+ F + +NI+G +V L IWDTAGQE+F + YYR ++G I+VYD+T
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 95 EDSF 98
D+F
Sbjct: 62 ADTF 65
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 70.5 bits (165), Expect = 5e-13
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
KVVLLG+ VGKTSL R E+ F T+ +K + I +V LS+WDTAG E+
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSFR 99
F + YYR ++ IL++++ D S +
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQ 100
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 69.7 bits (163), Expect = 9e-13
Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 3 TTTGGARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLS 62
T G + V+L+GD GKT+LL Y+ ++FNEK+ T+ + L+ + ++G R+ L+
Sbjct: 225 TRPNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNS-LSTAVEVDGERIELT 283
Query: 63 IWDTAGQEKFHALGPIYYRNSNGAILVYDIT 93
+WDT+G E + + P+ Y N + ++ +DI+
Sbjct: 284 LWDTSGHEDYDHVRPLSYNNVDIVLICFDIS 314
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/86 (34%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K+V++GDG GKT LL+ + +D+F E ++ T+ ++ + ++G +V L++WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 5989
Query: 72 FHALGPIYYRNSNGAILVYDITDEDS 97
+ L P+ Y +++ ++ + I DS
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDS 6015
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 68.1 bits (159), Expect = 3e-12
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
+ KVV+LG G VGK++L ++++ +F EK+ T++ F K + ++ N L I DTAG
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAG 60
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
E+F ++ +Y +N G +LVY + + +F
Sbjct: 61 TEQFASMRDLYIKNGQGFLLVYSLINRQTF 90
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 64.9 bits (151), Expect = 3e-11
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
+ K+V++G G VGK++L +++I+ F + T++ ++ K+ I+ +L I DTAG
Sbjct: 10 KQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSY-RKQCVIDERVAHLDILDTAG 68
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRK 100
QE+F A+ Y R+ G +LV+ +TD SF +
Sbjct: 69 QEEFSAMREQYMRSGEGFLLVFSVTDRSSFEE 100
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 63.3 bits (147), Expect = 8e-11
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 42 TLQATFLNKRLNINGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
T+ F +K +N+ G V L IWDTAGQE+F ++ YYR + GA+LVYDI+ ++F
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETF 183
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/107 (28%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
+N+K+V++GDG VGK++ L+ + F +++ T+ + + + ++G N+ +WDTAG
Sbjct: 4 QNVKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNY-SSNIMLDGKAYNVGLWDTAG 62
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLE 115
QE + L P+ Y ++ ++ +DI SF + +L M E
Sbjct: 63 QEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPE 109
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 62.5 bits (145), Expect = 1e-10
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQE 70
LK V++GDG VGKTSLL+ Y+ D F ++ T T+ + + +N + DTAGQE
Sbjct: 19 LKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTY-HVTVEVNKKLCMIEFCDTAGQE 77
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSF 98
F AL P+ Y +++ I+ + + SF
Sbjct: 78 DFDALRPLCYSSADVFIVCFSVVSPTSF 105
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 61.7 bits (143), Expect = 3e-10
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 56 GNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
G ++ L IWDTAGQE+FH + YYR + G +LVYD+T+E SF
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSF 44
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 61.3 bits (142), Expect = 3e-10
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 16 LGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEKFHAL 75
+GDG GKT+ + R++ +F +K++ TL + + ++WDTAGQEKF L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 76 GPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTR 111
YY AI+++D+T ++ K V DL R
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTY-KNVPNWHRDLER 132
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 61.3 bits (142), Expect = 3e-10
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
+ +K V++GDG VGKT LL+ Y +KF +++ T+ + + I G L ++DTAG
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAG 60
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLT 110
QE + L P+ Y ++ ++ + + SF E+ ++T
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT 102
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 60.9 bits (141), Expect = 4e-10
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
K+ +LG G VGKTSLL + KF+EKH+ T+ F++ +N++G + I DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHS-VNMDGVYYSTCIVDTAGTYA 72
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSFRKGVE 103
F + + I+V+ I E SFR+ E
Sbjct: 73 FPVMRRLAIHTCQAFIVVFAINSESSFREAFE 104
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 60.5 bits (140), Expect = 6e-10
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 54 INGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
+N +IWDTAGQE+F +L P+YYR++ AILVYDIT E +F
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTF 48
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 59.3 bits (137), Expect = 1e-09
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R LKVVL GD VGKTS L+ + NE T L + + L +WDT G
Sbjct: 5 RKLKVVLTGDNNVGKTSFLINLTQ---NELEGTPTAFANYELGLEVGSQKFLLDLWDTEG 61
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREML 114
++ L P+ Y+ S+ +L +DI++ +F + +E +L T ++L
Sbjct: 62 TTEYDRLRPLTYQGSDIILLCFDISNRQTFER-IESKWLPETTQVL 106
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 57.6 bits (133), Expect = 4e-09
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNR-VNLSIWDTA 67
RN KV+++GD GK S + RY+ + ++ + T+ F K + N + L IW A
Sbjct: 17 RNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIA 76
Query: 68 GQEKFHALGPIYYRNSNGAILVYDI 92
GQE+F ++ +YY+ ++ ++++D+
Sbjct: 77 GQERFSSMTRVYYKGADACVVLFDL 101
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGN-RVNLSIWDTAGQE 70
+VV+LG G VGKTSL+ R+I F+E++ T+ K + ++ + L I DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTV-GDLYEKSVTLSKDFNAFLEIMDTAGSY 167
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSFRKGVE 103
F A+ + +N++ +LVY + ++ S ++ +E
Sbjct: 168 PFPAMKKLTIQNADAFVLVYSVDEKASLQEALE 200
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 7 GARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
G L+++++G GKT++L K +E + T+ N + + + ++WD
Sbjct: 87 GKDELRLLMVGLDAAGKTTILYHL---KLDEP-VNTIPTIGFNVEV-VEYKNIKFTVWDI 141
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLER 116
GQ+K L +Y++ + G I V D D D ++ EELF L E L+R
Sbjct: 142 GGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKR 191
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 55.6 bits (128), Expect = 2e-08
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 59 VNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFR 99
V L IWDTAGQE+F + YYR+ NG I+ YDIT D+F+
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFK 135
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 54.8 bits (126), Expect = 3e-08
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R +V G VGKTSL+LR++ FN+ + T++ F+ K + N L I DT+G
Sbjct: 27 RRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFI-KHVFFNNETYELQIIDTSG 85
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRK 100
+F A+ + + +LVY +SF K
Sbjct: 86 TYEFPAMRKVDIAKGDAFVLVYSQDHPESFTK 117
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
++ K+ ++G VGK+SL ++++E +F + + T++ TF K + G L + DTAG
Sbjct: 5 KSRKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAG 63
Query: 69 QEKFHALGPIYYRNSNGAILVYDIT 93
Q+++ Y +G ILVY +T
Sbjct: 64 QDEYSIFPQSYSMGIHGYILVYAVT 88
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 54.4 bits (125), Expect = 4e-08
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQE 70
LK+ ++GDG VGKT+L + + F +++ T N++G + ++D+AG E
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGE 66
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSF 98
F L P+ Y N++ ++ +DI SF
Sbjct: 67 DFDRLRPLGYPNTDIFLVCFDIAHRASF 94
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 53.2 bits (122), Expect = 9e-08
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTT---LQATFLNKRLNINGNRVNLSIWDTAG 68
K +++G+ VGK+ L+ + F+ K +T+ + F L N ++ L+I DTAG
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDN-KKIKLTIGDTAG 410
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
QE++ ++ P Y+R G LV+DIT E +F
Sbjct: 411 QERYFSILPAYFRGVQGVFLVFDITVEITF 440
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
KVVL+GD VGK++LL R+ ++FN + +T+ F + + ++G + IWDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 50.8 bits (116), Expect = 5e-07
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 7 GARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
G + ++++++G GKT++L + K E +TT+ N ++ ++ ++WD
Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKL---KLGEI-VTTIPTIGFNVE-SVEYKNISFTVWDV 68
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEEL 105
GQ+K L Y++N+ G I V D D + + EEL
Sbjct: 69 GGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEEL 107
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 50.8 bits (116), Expect = 5e-07
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 63 IWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFR 99
IWDTAGQE+F +LG +YR ++ +LV+D+T +SF+
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFK 37
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 50.4 bits (115), Expect = 6e-07
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQ-E 70
++ LLGD VGKT+LL+R++ +F ++ T++ + K +NI+ V L I DTA + +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTASRGQ 65
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSF 98
L + R +G I+VY D +F
Sbjct: 66 NSCKLRDQFVREGDGFIVVYSTADRSTF 93
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 7 GARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
G + ++++++G GKT++L + K E +TT+ N + ++ ++WD
Sbjct: 14 GKKEMRILMVGLDAAGKTTILYKL---KLGEI-VTTIPTIGFNVE-TVEYKNISFTVWDV 68
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEEL 105
GQ+K L Y++N+ G I V D D + + EEL
Sbjct: 69 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREEL 107
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTA 67
K+VL+GD VGK++LL RY +++F+ T+ ++ + I G V IWDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 48.4 bits (110), Expect = 3e-06
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 7 GARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
G R +++V+LG GKT++L + K E T F + L N V L+IWD
Sbjct: 16 GNRQVRIVMLGLDAAGKTTILYKL---KLKETVSTIPTIGFNVETLQPTKN-VTLTIWDV 71
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEEL 105
GQ+K L Y++ + G + V D +D + EEL
Sbjct: 72 GGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEEL 110
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 47.6 bits (108), Expect = 4e-06
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKF--NEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQ 69
K+ L G VGKTS+ R D+F E+ L + F+ + I ++ + +WDT G
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFI-PLVCICNKKLKIHLWDTLGM 68
Query: 70 EKFHALGPIYYRNSNGAILVYDITDEDS 97
E++ +L +Y NS ++VY + DS
Sbjct: 69 EEYESLTRNHYSNSKVVLVVYSLDLPDS 96
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 46.8 bits (106), Expect = 8e-06
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R+ +VLLG VGK++LL+R+ +F ++ TL+ T+ + I+ + L I DTA
Sbjct: 126 RDYSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTY-DVSATIDEDPATLHITDTAS 184
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLERQEHNT 121
+ P+Y + G I+VY I + +F + + L RE+ +++ T
Sbjct: 185 TYE-----PVYLSQNEGFIVVYSINELRTFETAKQ--LVKLIREIKKQKALTT 230
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R VV+LG GKTS+L R +KF E ++ T+ T N + +WD G
Sbjct: 20 RPFHVVMLGLDKSGKTSILYR---NKFRE-YVNTVPTTAFNVETIRPFKGIRFKVWDIGG 75
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELF 106
+E+ L Y R ++ I V D T + +ELF
Sbjct: 76 REQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELF 113
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 15 LLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEKFHA 74
++G GKT++L R K E ++T+ N + ++ ++WD GQ+K A
Sbjct: 1 MIGLDNAGKTTILYRL---KLEEV-VSTVPTLGFNVE-TVTYKNISFTVWDIGGQDKIRA 55
Query: 75 LGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLER 116
L +YY+ G I V D D + + EL L E L++
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQ 97
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 17/90 (18%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
+ KVV+LG G VGK++L ++++ +F EK+ T++ + TAG
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-----------------DFYHTAG 44
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
E+F ++ +Y +N G +LVY + + +F
Sbjct: 45 TEQFASMRDLYIKNGQGFLLVYSLINRQTF 74
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 50 KRLNINGNRVNLSIWDTAGQEK--FH---ALGPIYYRNSNGAILVYDITDEDSFRK 100
+RL + G V+L I DT G+ + FH + P+ YR +GA++V+D+TD SF +
Sbjct: 8 ERLELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFER 63
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 43.6 bits (98), Expect = 7e-05
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 55 NGNR-VNLSI-WDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFR 99
NGN +N++I DTAG+EK+ L Y R ++ AI+ YDIT E S +
Sbjct: 266 NGNLGINVTISMDTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLK 312
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 43.6 bits (98), Expect = 7e-05
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 11 LKVVLLGDGCVGKTSLL-LRYIEDKFNEKHLT---TLQATFLNKRLNINGNRVN-LSIWD 65
+++ ++GD VGKTSL+ L E+ + T T++ + + + G + L WD
Sbjct: 7 VRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWD 66
Query: 66 TAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
G I+Y NG ILV+D+T+ SF
Sbjct: 67 IGGSANHENSRSIFYNGINGLILVHDLTNRKSF 99
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 43.2 bits (97), Expect = 9e-05
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
++ + G VGKTS++ R+ KF+E++ T++ + +K LN NG+ + L+ D++G +
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCY-SKVLNKNGSIMVLNTTDSSGSYQ 68
Query: 72 FHALGPIYYRNSNG 85
F A+ + + ++G
Sbjct: 69 FPAMREVAIKRASG 82
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 57 NRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
N+ + S W+ AGQE+F + YYR ++G ++VYDIT +S+
Sbjct: 367 NKNDESGWE-AGQERFRTITSSYYRGAHGVMIVYDITKRESY 407
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R +KVV++G+ VGK++L +R++ +F ++ TL++T+ + + G V + + DTAG
Sbjct: 860 RIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTDTAG 918
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
+ L +++Y IT SF
Sbjct: 919 ENSPAKLERC-LEIGEVFVVLYSITSRHSF 947
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQE 70
+++ L+G GKT+ + +F+E + T+ N R GN V + +WD GQ
Sbjct: 21 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG---FNMRKVSKGN-VTIKVWDIGGQP 76
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSFRKGVEEL 105
+F ++ Y R N + + D D D EL
Sbjct: 77 RFRSMWERYCRGVNCIVYMVDAADHDKLEASKNEL 111
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 41.1 bits (92), Expect = 4e-04
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 9 RNLKVVLLGDGCVGKTSLLLR--YIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
RN+++V+LGD VGKT LLL+ Y + + KHL ++ ++ + ++G L + D
Sbjct: 17 RNIRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYV-ANIIVDGKVYKLELCDV 75
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDSFR 99
+ P + +++ L + + D DSFR
Sbjct: 76 DNLDT-KISKP--FSDTDVFCLCFSVGDMDSFR 105
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 40.7 bits (91), Expect = 5e-04
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
++++LG GK+ L + +++ TT F L +G +NL+IW+ G EK
Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDG--LNLNIWEIGGDEK 225
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREML 114
+ A P + ++ + V D +D D F + + L L+ +L
Sbjct: 226 YRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLL 268
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 40.3 bits (90), Expect = 7e-04
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQ- 69
++VV+LG VGK++L +R++ +F ++ TL++T L I+ V+L I DTAG+
Sbjct: 17 VRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTH-RHILQIDNEDVSLDISDTAGEV 75
Query: 70 -EKFHALGPI---YYRNSNG 85
++ LG I Y NS+G
Sbjct: 76 RVRYPNLGRISGQYSDNSDG 95
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 59 VNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREML 114
++ ++WD GQ+K L Y++N+ G I V D D + + EEL L + L
Sbjct: 510 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDEL 565
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLN 49
K++L+GD VGKT +L R+ +D FN ++T++ LN
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTIENVLLN 48
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFL-----NKRLNINGNRVN--L 61
R LK+ ++GD VGKT +L R+ + + + + T+ + + N + +RVN +
Sbjct: 7 RRLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIV 66
Query: 62 SIWDT---AGQEK--FHALGPIYYRNSNGAILVYDITDEDSFR 99
+ WDT A E+ L P+ YR+++ I+ +DIT+ SF+
Sbjct: 67 TYWDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQ 109
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 55 NGNRVNLSIWDTAGQEKFHALGPIYYR 81
NG + L +WDTAGQE+F A+ YYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF---RKGVEEL 105
QE++ A+ YYR + GA+LVYDI SF K VEEL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEEL 41
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQE 70
+KVV +GD VGKTS L F + ++ + +K + I+G R + + DT G
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGY-SKTMEIDGKRYTVLLCDTPGTM 68
Query: 71 KFHALGPIYYRNSNGAILVYDITDEDSF 98
+++ ++ +L +DI + +SF
Sbjct: 69 HPRIPPQHWFQYASVFLLCFDIANRESF 96
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF---RKGVEEL 105
QE++ A+ YYR + GA+LVYDI SF K VEEL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEEL 41
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 59 VNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEEL 105
+ S+WD GQ+K L Y++ + G I V D D++ + EEL
Sbjct: 154 ITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREEL 200
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 36.3 bits (80), Expect = 0.011
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 NLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
+ K+ +LG VGKTSL+ + F +H+ T+ ++ LN +G N+ + DT
Sbjct: 187 DFKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 34.7 bits (76), Expect = 0.033
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNIN 55
+ L + +LG+G VGK+SL+ + + F E+++ T++ F++K L N
Sbjct: 26 KKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIE-EFVSKHLLYN 71
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 34.7 bits (76), Expect = 0.033
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R ++++LLG GKT++L + + H+T Q + + G R+N +WD G
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASE--DVLHITPTQGFNIKSVQSKGGFRLN--VWDIGG 71
Query: 69 QEKFHALGPIYYRNSN 84
Q K Y+ N++
Sbjct: 72 QRKIRPYWKNYFENTD 87
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 34.3 bits (75), Expect = 0.044
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 57 NRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
N+ I DTAGQE++ A+ Y R G + V+ + + SF
Sbjct: 275 NKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSF 316
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 34.3 bits (75), Expect = 0.044
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 6 GGARNLKVVLLGDGCVGKTSLLLRYIEDKFNE 37
G ++KVVLLG GKTSL+ RY+ +FN+
Sbjct: 23 GSKVDVKVVLLGKEYSGKTSLVERYLHHRFND 54
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 33.5 bits (73), Expect = 0.076
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 18/115 (15%)
Query: 7 GARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
G ++ ++G G VGK+S+ +RY++++F E ++ G ++ + DT
Sbjct: 2595 GETMFRLCVVGSGGVGKSSVTIRYLKNEFTE--------------IDYCGKLYDIEVVDT 2640
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLERQEHNT 121
AGQE++ + + ++++ I S+ + +++L + R E +E NT
Sbjct: 2641 AGQEEYTSFRDSSLATGDAFLVLFAINSASSWNE-LKDLRGKIIR---EHEESNT 2691
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 33.5 bits (73), Expect = 0.076
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 58 RVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEEL 105
R N ++ D GQ+K L Y+ S G I V D D D + +EL
Sbjct: 136 RDNNALLDVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKEL 183
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 61 LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDS 97
+ +WDT G E++ +L +Y NS ++VY + DS
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDS 37
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 33.1 bits (72), Expect = 0.10
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 9 RNLKVVLLGDGCVGKTSLL--LRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT 66
+ KVVL+GD VGK+ ++ L + + L T + N +L + DT
Sbjct: 12 KQYKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYK-PTTGGHASYFTASNSCHLYLLDT 70
Query: 67 AGQEKFHALGPIYYRNSNGAILVYDITDEDS 97
+G E++ L IY +N + + + + D S
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTFALNDPHS 101
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 32.3 bits (70), Expect = 0.18
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 MTTTTGGARN---LKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTL 43
++ +T G R KV+++GD VGKTSL+ RY+ F+ + T+
Sbjct: 659 LSWSTAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 31.9 bits (69), Expect = 0.23
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 61 LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITD------EDSFRKGVEELFLD 108
L +WD AGQ ++A P+++ + +L ++++ E R+GV ++ LD
Sbjct: 474 LDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLNERAEPCMRQGVADIKLD 527
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 56 GNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLE 115
G + LS WD AGQ ++A ++ S + V++ T + + + L++ R L
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKRRELN 62
Query: 116 RQEHNTQT 123
+ N +T
Sbjct: 63 SKLDNAKT 70
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.5 bits (68), Expect = 0.31
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
R L V +LG VGK++ +R + +F ++ L+ + + + I+G + L + DTAG
Sbjct: 180 RALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHS-MEIDGQYLALDVLDTAG 238
Query: 69 Q 69
+
Sbjct: 239 K 239
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 31.5 bits (68), Expect = 0.31
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 59 VNLSIWDTAGQEKFHALGPIYYRNSNGAILVY 90
V L WD A E+F + +Y RN +GA++ +
Sbjct: 108 VKLQFWDVAEHERFLKMTAVYCRNCSGALVFW 139
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 31.5 bits (68), Expect = 0.31
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 8 ARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTA 67
++ +K+VLLG+ GKTS +E + + L + + + + + + + D A
Sbjct: 258 SKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLEVQVVDCA 317
Query: 68 GQEKFHALGPIYYRNSNGAILVYDI 92
GQ ++ P + +LV ++
Sbjct: 318 GQRRYQLTHPFFLSEEALHLLVINL 342
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 31.5 bits (68), Expect = 0.31
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 11 LKVVLLGDGCVGKTSLLLRYIE----------------DKFNEKHLTTLQATFLNKRLNI 54
LK+VL+GD +GK++L+ + E D+ E T L+A N N
Sbjct: 6 LKLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYSNP 65
Query: 55 NG---NRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDL 109
G + +I DT G + P+ Y +++ IL +D+T+ SF + F ++
Sbjct: 66 TGVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEI 123
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 31.1 bits (67), Expect = 0.41
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 79 YYRNSNGAILVYDITDEDSF 98
+Y+++ GA+LVYD+T +SF
Sbjct: 10 FYKDTQGALLVYDVTSRESF 29
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 31.1 bits (67), Expect = 0.41
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 79 YYRNSNGAILVYDITDEDSF 98
+Y+++ GA+LVYD+T +SF
Sbjct: 5 FYKDTQGALLVYDVTSRESF 24
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 31.1 bits (67), Expect = 0.41
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 7 GARNLKVVLLGDGCVGKTSLLLRYIEDK--FNEKHLTTLQATFLNKRLNINGNRVNLSIW 64
G ++K++L+G GKT+L+ R + D F + + + IW
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIW 607
Query: 65 DTAGQEKFHALGPIYYRNSNGAILVYDITD 94
D GQE ++A + + ILV+++ +
Sbjct: 608 DFGGQEDYYATHQCFISTLSLYILVWNLEE 637
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTL 43
KV+++GD VGKTS + RY+ ++ T+
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 30.7 bits (66), Expect = 0.54
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 9 RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTL--QATFLNKRLNI 54
R+L+VV+LG VGK++L +R + +F ++ +TL ++N L I
Sbjct: 15 RSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYINTMLKI 62
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 30.7 bits (66), Expect = 0.54
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 50 KRLNINGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSF 98
K L I + + L I DTAG + Y N +G ++VY ITD S+
Sbjct: 6 KELRIGDSSMELDILDTAGNGEAS-----YIHNGDGFVVVYSITDYYSY 49
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 30.3 bits (65), Expect = 0.71
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 61 LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITD------EDSFRKGVEELFLD 108
+SIWD AGQ ++A P++ +LVY++ E R+GV ++ L+
Sbjct: 556 VSIWDFAGQHLYYASHPVFLSPRAVYLLVYNLKKDLNAEAEPCVRQGVYDVLLE 609
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 30.3 bits (65), Expect = 0.71
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 11 LKVVLLGDGCVGKTSLLLRYI 31
LKV+L+GD VGKT LLL ++
Sbjct: 13 LKVLLIGDSNVGKTKLLLTFL 33
>SB_34022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 30.3 bits (65), Expect = 0.71
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 61 LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFR 99
L +WD AGQ ++A P+++ + +L ++++ +R
Sbjct: 62 LDVWDFAGQHLYYATHPVFFSSRAVYVLTHNLSKNLGYR 100
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 30.3 bits (65), Expect = 0.71
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 61 LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDE 95
L+IWD GQ + Y+ +++G I V D D+
Sbjct: 4 LNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQ 38
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 29.9 bits (64), Expect = 0.94
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 52 LNINGNRVNLSIWDTA--GQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDL 109
++++G V +SI ++ GQ YY N++ I V D D+D +EL L
Sbjct: 137 MSVSGKLVIMSILNSLIPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAML 196
Query: 110 TREMLER 116
+ L++
Sbjct: 197 EEDELKK 203
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 78 IYYRNSNGAILVYDITDEDSFRK 100
I Y + G +LVYDIT++ SF K
Sbjct: 80 IIYEDDKGIMLVYDITNDKSFEK 102
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 29.9 bits (64), Expect = 0.94
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 12 KVVLLGDGCVGKTSLLLRYIED--KFNEKHLTTLQATFLNKRLNINGNRVNLSIWD 65
KV++ GD CVGK++L+ + D + + + T+ A L K +NI S+W+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNI--PETTDSVWE 60
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 29.9 bits (64), Expect = 0.94
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 10 NLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTT 42
N+K+V+ GD GKT + R FNE+++ T
Sbjct: 225 NMKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_27497| Best HMM Match : Death (HMM E-Value=0.028)
Length = 892
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 57 NRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDE 95
N + + IWD AGQ + A P++ +LV+D++ +
Sbjct: 34 NNIYIMIWDFAGQPTYCATHPVFMSPRALYLLVHDLSTD 72
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 79 YYRNSNGAILVYDITDEDSF 98
Y RN G I++Y ITD SF
Sbjct: 5 YMRNGEGFIIIYSITDRSSF 24
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 61 LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLERQEHN 120
L WD AGQ ++A P+++ + +L ++++ +D +K + + ++ L+ +
Sbjct: 538 LDAWDFAGQHLYYATHPVFFSSRAVYVLTHNLS-KDLRKKAEPCVRQGVVKKKLDNANNE 596
Query: 121 TQTE 124
T E
Sbjct: 597 TNLE 600
>SB_33177| Best HMM Match : Beach (HMM E-Value=0)
Length = 446
Score = 28.3 bits (60), Expect = 2.9
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 27 LLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSI-WDTAGQEKFHALGPIYYRNSNG 85
L+R + F K+ L+ ++++RLN + ++L + G+E + A YY G
Sbjct: 135 LVRVDCEDFIRKNREALECPYVSERLN---HWIDLIFGYKQRGEEAWEADNVFYYLTYEG 191
Query: 86 AILVYDITDEDSFRKGVEELFLDL--TREMLERQEHNTQTEVN 126
A+ + ITD + R +E L+ T + L H + +V+
Sbjct: 192 AVDLDSITDPNE-RASLESQILEFGQTPKQLFTSPHPQRLDVD 233
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 54 INGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFR 99
I+G V+L +WDT G + Y+N++ +L + I SF+
Sbjct: 78 IDGVSVSLRLWDTFGDHSMNR--RFAYQNAHVIVLCFAINTPSSFK 121
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 13 VVLLGDGCVGKTSLLLRYIEDKFNEKHLTTL 43
+V+LG VGKT+L++R++ +F ++ TL
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPTL 357
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 12 KVVLLGDGCVGKTSLLLRYIEDKFNEK 38
KVV G VGKTSL LR ++KF K
Sbjct: 29 KVVFAGFRGVGKTSLFLRIRDEKFYGK 55
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 45 ATFLNKRLNIN---GNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKG 101
+T L R+ I G + LS WD AGQ ++A ++ S + V++ T + +G
Sbjct: 710 STSLLSRIGITSGIGPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGE---EG 766
Query: 102 VEEL 105
VE L
Sbjct: 767 VENL 770
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 85 GAILVYDITDEDSFR 99
G +LVYDIT EDSF+
Sbjct: 4 GILLVYDITTEDSFK 18
>SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1565
Score = 27.1 bits (57), Expect = 6.6
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 20 CVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDT--AGQEKFHALGP 77
C+ T L++++ + L T K +N N +++ L I DT AG + L
Sbjct: 488 CISATQTTLKWLKQEDGSDIEIPLSQTVSTKDVNTNQHKLILMIKDTQLAGDAMYKCLMI 547
Query: 78 IYYRNSN---GAILVYDITD 94
N ++++YD TD
Sbjct: 548 ASNGKQNFKLASVIIYDDTD 567
>SB_17664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 72 FHALGPIYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLERQEHNTQTE 124
+ AL ++Y N+ ++Y I +D FRK + E+ D+ R R Q+E
Sbjct: 288 YDALNIVFYVNAAFGPVIYFIFLDD-FRKALGEVLRDIVRCQKIRANEEVQSE 339
>SB_18870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 30 YIEDKFNEKHLTTLQAT 46
YIEDKFN+ HL + T
Sbjct: 287 YIEDKFNDLHLVVIGGT 303
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 78 IYYRNSNGAILVYDITDEDSFRKGVEELFLDLTREMLERQEHNTQTEVNR 127
+Y +N G +LVY IT + +F DL ++L ++ + Q NR
Sbjct: 4 LYMKNGQGFVLVYSITAQSTFND-----LQDLREQILRVKDTDDQEIKNR 48
>SB_35147| Best HMM Match : rve (HMM E-Value=0.019)
Length = 214
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 24 TSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIW 64
TSL+ + + D NEK + T + T N N R N +W
Sbjct: 14 TSLISQELRDFLNEKGVATSRTTAYNPEGNGQVERYNGVVW 54
>SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)
Length = 561
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 24 TSLLLRYIEDKFNE-KHLTTLQATFLNKRLNINGNRV 59
TS L+Y+E+KF E K+LT + L K + ++ +V
Sbjct: 441 TSSQLKYLEEKFQEKKYLTISERNELAKSMYLSDTQV 477
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 46 TFLNKRLNINGNRVNLSIWDTAGQEKFHALGPIYYRNS-NGAIL 88
TF +NIN +N+SI GQ+ F P NS NG ++
Sbjct: 1201 TFTIVVVNINEAPINISITSLNGQQAFPDNAPTVSENSPNGTVV 1244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,486,057
Number of Sequences: 59808
Number of extensions: 162087
Number of successful extensions: 565
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 431
Number of HSP's gapped (non-prelim): 125
length of query: 151
length of database: 16,821,457
effective HSP length: 76
effective length of query: 75
effective length of database: 12,276,049
effective search space: 920703675
effective search space used: 920703675
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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