Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000682-TA|BGIBMGA000682-PA|IPR013753|Ras, IPR003577|Ras
small GTPase, Ras type, IPR003579|Ras small GTPase, Rab type,
IPR003578|Ras small GTPase, Rho type
         (151 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           101   1e-23
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    66   3e-13
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    26   0.60 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   4.2  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    23   5.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.6  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    22   9.7  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      22   9.7  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    22   9.7  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    22   9.7  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   9.7  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  101 bits (241), Expect = 1e-23
 Identities = 44/89 (49%), Positives = 65/89 (73%)

Query: 12  KVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAGQEK 71
           K+VLLG+  VGK+SL+LR+++ +F+E   +T+ A FL + L I+   V   IWDTAGQE+
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 72  FHALGPIYYRNSNGAILVYDITDEDSFRK 100
           +H+L P+YYR +  AI+VYDI + DSF +
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFAR 114


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
          GTPase protein.
          Length = 190

 Score = 66.5 bits (155), Expect = 3e-13
 Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 9  RNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWDTAG 68
          R +K V++GDG VGKT +L+ Y  D F  +++ T    + +  + ++G +V+L +WDTAG
Sbjct: 5  RPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNY-SAPMVVDGVQVSLGLWDTAG 63

Query: 69 QEKFHALGPIYYRNSNGAILVYDITDEDSF 98
          QE +  L P+ Y  ++  ++ Y +    SF
Sbjct: 64 QEDYDRLRPLSYPQTDVFLICYSVASPSSF 93


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 0.60
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 19  GCVGKTSLLLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSI 63
           GCVG    L+    +  N KH   L+    N  + ++G  V + +
Sbjct: 72  GCVGNLMALIHLWRNVRNTKHALMLKCLLTNDLIGLSGMFVQMCL 116


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 18/80 (22%), Positives = 31/80 (38%)

Query: 47  FLNKRLNINGNRVNLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFRKGVEELF 106
           F N+ L    N  N     TAG  +   LGP  +      +L   + D  S     +++ 
Sbjct: 588 FRNRVLLYETNEGNRERVVTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIV 647

Query: 107 LDLTREMLERQEHNTQTEVN 126
           L      ++  E+  +T +N
Sbjct: 648 LVAVGSRIDDLENTIETSIN 667


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 1   MTTTTGGARNLKVVLLGDGCVGKTSLLLRYIEDKFNEKHLT 41
           + T T  A N +V  LG+ C+GK    L  + ++++   LT
Sbjct: 86  INTFTKTAENPRVRFLGNLCLGK-DFTLEELRERYHAVLLT 125


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 27   LLRYIEDKFNEKHLTTLQATFLNKRLNINGNRVNLSIWD 65
            L  Y E++ +   L  LQ         +N N+ NLS+ D
Sbjct: 1052 LKEYTEEELDSYKLPDLQYQISILEEKLNANKPNLSVID 1090


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 2/20 (10%)

Query: 111 REMLE--RQEHNTQTEVNRT 128
           RE+++  +QEHNT T+V  T
Sbjct: 267 RELMDQYKQEHNTTTKVLMT 286


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 9  RNLKVVLLGDGCVGKTSLL 27
          R LK++LLG G  GK++ +
Sbjct: 32 RELKLLLLGTGESGKSTFI 50


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
          subunit AgOn protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 8/20 (40%), Positives = 17/20 (85%)

Query: 8  ARNLKVVLLGDGCVGKTSLL 27
          A+++K++LLG G  GK++++
Sbjct: 18 AKDIKLLLLGAGESGKSTIV 37


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
          subunit AgOa protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 8/20 (40%), Positives = 17/20 (85%)

Query: 8  ARNLKVVLLGDGCVGKTSLL 27
          A+++K++LLG G  GK++++
Sbjct: 18 AKDIKLLLLGAGESGKSTIV 37


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 62  SIWDTAGQEKFHALGPIYYRNSNGAI 87
           +IW+  G  K+  L   YY   +GAI
Sbjct: 208 TIWEFEGHLKYSPLFYGYYSTFSGAI 233


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,137
Number of Sequences: 2123
Number of extensions: 4883
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 11
length of query: 151
length of database: 516,269
effective HSP length: 59
effective length of query: 92
effective length of database: 391,012
effective search space: 35973104
effective search space used: 35973104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)