GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000681-TA|BGIBMGA000681-PA|IPR004145|Protein of unknown
function DUF243
         (489 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          33   3.0  
EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform ...    33   3.0  
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    33   3.0  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   3.0  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 281  KKPEEVQDILVPKIEQKPPSK-PEV 304
            KKPEE   +L+PK E+ PP+K PEV
Sbjct: 6648 KKPEEKVPVLIPKKEKPPPAKVPEV 6672


>EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform
           PEVK variant 4 protein.
          Length = 234

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 281 KKPEEVQDILVPKIEQKPPSK-PEV 304
           KKPEE   +L+PK E+ PP+K PEV
Sbjct: 24  KKPEEKVPVLIPKKEKPPPAKVPEV 48


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 281 KKPEEVQDILVPKIEQKPPSK-PEV 304
           KKPEE   +L+PK E+ PP+K PEV
Sbjct: 24  KKPEEKVPVLIPKKEKPPPAKVPEV 48


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)

Query: 281   KKPEEVQDILVPKIEQKPPSK-PEV 304
             KKPEE   +L+PK E+ PP+K PEV
Sbjct: 10910 KKPEEKVPVLIPKKEKPPPAKVPEV 10934


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.312    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,983,848
Number of Sequences: 224733
Number of extensions: 1553515
Number of successful extensions: 2852
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2814
Number of HSP's gapped (non-prelim): 42
length of query: 489
length of database: 73,234,838
effective HSP length: 93
effective length of query: 396
effective length of database: 52,334,669
effective search space: 20724528924
effective search space used: 20724528924
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 67 (31.1 bits)