Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000680-TA|BGIBMGA000680-PA|IPR008147|Glutamine
synthetase, beta-Grasp, IPR008146|Glutamine synthetase, catalytic
region
         (422 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   5.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   5.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    22   7.1  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 98  KLKNEVHFLIHYYPK 112
           K K   +FLIH+YP+
Sbjct: 156 KSKQVEYFLIHWYPR 170


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 98  KLKNEVHFLIHYYPK 112
           K K   +FLIH+YP+
Sbjct: 156 KSKQVEYFLIHWYPR 170


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 275 GDDLWVARYILHRLAEEYGVIVTFDP 300
           G  L +  + LHR AE Y  ++ FDP
Sbjct: 83  GTVLHIHIFDLHRNAEIYPDLLKFDP 108


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,483
Number of Sequences: 317
Number of extensions: 4585
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 3
length of query: 422
length of database: 114,650
effective HSP length: 59
effective length of query: 363
effective length of database: 95,947
effective search space: 34828761
effective search space used: 34828761
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)