GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000680-TA|BGIBMGA000680-PA|IPR008147|Glutamine
synthetase, beta-Grasp, IPR008146|Glutamine synthetase, catalytic
region
         (422 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    26   2.2  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   6.8  
AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450 pr...    24   9.0  
AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.             24   9.0  
AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.             24   9.0  
AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.             24   9.0  
AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.             24   9.0  
AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.             24   9.0  
AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.             24   9.0  
AY062202-1|AAL58563.1|  151|Anopheles gambiae cytochrome P450 CY...    24   9.0  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   9.0  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   9.0  

>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 270 IGVHAGDDLWVARYILHRLAEEYGVIVTFDPKPVQDWN 307
           + + AG D  +  Y++HR    Y     FDP+   D N
Sbjct: 83  VTIPAGTDFTIPIYVIHRNPVVYPDPERFDPERFSDGN 120


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 144 IYKDPFRRGNHILVMCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYIL 199
           +Y D F +G +I     +  YN     +N  +      D   +   W+G++  ++L
Sbjct: 456 VYNDVFSKGMNIFGSAWSVNYNTSTVMTNKELQLNPTTD-YSETVYWYGLDPLWML 510


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 6.8
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 82   ILEDYNARAKSNAREWKLKNEVHFLIHYYPKDQEDLPIWNFDGSSTNQADGHNSDTYLVP 141
            IL  Y+ RA+   ++ + K+E      YY +D     + + D       + H  D   V 
Sbjct: 2548 ILYQYDVRAERTFKQVRAKDETVLSEKYYIRDANGFVLMDID--MAYLTNDHPPDV-RVT 2604

Query: 142  RAIYKD 147
              IYKD
Sbjct: 2605 SYIYKD 2610


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 6.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 20  VLTNSPNAVLSKTLLSRYNDL 40
           +L N+P  V  + LLSR ND+
Sbjct: 500 LLLNNPGKVYERLLLSRINDV 520


>AY745219-1|AAU93486.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 269 SIGVHAGDDLWVARYILHRLAEEYGVIVTFDPK 301
           +I +  GD L+V+ + LHR  + Y     F P+
Sbjct: 50  AIPLKVGDKLYVSVWALHRSGDYYPEPERFSPE 82


>AY341201-1|AAR13765.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 31 KTLLSRYNDLPLPADKILATYI 52
          +TLL+R+ D+  P  + L TY+
Sbjct: 51 RTLLTRFMDITTPPTRQLLTYL 72


>AY341200-1|AAR13764.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 31 KTLLSRYNDLPLPADKILATYI 52
          +TLL+R+ D+  P  + L TY+
Sbjct: 51 RTLLTRFMDITTPPTRQLLTYL 72


>AY341199-1|AAR13763.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 31 KTLLSRYNDLPLPADKILATYI 52
          +TLL+R+ D+  P  + L TY+
Sbjct: 51 RTLLTRFMDITTPPTRQLLTYL 72


>AY341198-1|AAR13762.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 31 KTLLSRYNDLPLPADKILATYI 52
          +TLL+R+ D+  P  + L TY+
Sbjct: 51 RTLLTRFMDITTPPTRQLLTYL 72


>AY341197-1|AAR13761.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 31 KTLLSRYNDLPLPADKILATYI 52
          +TLL+R+ D+  P  + L TY+
Sbjct: 51 RTLLTRFMDITTPPTRQLLTYL 72


>AY341196-1|AAR13760.1|  154|Anopheles gambiae NOS protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 31 KTLLSRYNDLPLPADKILATYI 52
          +TLL+R+ D+  P  + L TY+
Sbjct: 51 RTLLTRFMDITTPPTRQLLTYL 72


>AY062202-1|AAL58563.1|  151|Anopheles gambiae cytochrome P450
           CYP4H14 protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 272 VHAGDDLWVARYILHRLAEEYGVIVTFDP 300
           V AG ++ V  Y++HR  E Y     FDP
Sbjct: 94  VPAGQNVLVPIYVIHRNPEIYPNPNQFDP 122


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 24  SPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSG 58
           +PN  LS+  L      P P  K  A  +WI G G
Sbjct: 246 NPNTPLSEDCLYINVVAPRPRPKNAAVMLWIFGGG 280


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 24  SPNAVLSKTLLSRYNDLPLPADKILATYIWIDGSG 58
           +PN  LS+  L      P P  K  A  +WI G G
Sbjct: 132 NPNTPLSEDCLYINVVAPRPRPKNAAVMLWIFGGG 166


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,279
Number of Sequences: 2123
Number of extensions: 20578
Number of successful extensions: 78
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 15
length of query: 422
length of database: 516,269
effective HSP length: 66
effective length of query: 356
effective length of database: 376,151
effective search space: 133909756
effective search space used: 133909756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)