Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000679-TA|BGIBMGA000679-PA|IPR001202|WW/Rsp5/WWP,
IPR000297|PpiC-type peptidyl-prolyl cis-trans isomerase
(164 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase Pin1|Schi... 77 1e-15
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 38 0.001
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 36 0.002
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 32 0.037
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.46
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 28 0.60
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 28 0.80
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 27 1.4
SPAC1B3.08 |||COP9 signalosome complex subunit 12 |Schizosacchar... 27 1.8
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 5.6
SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces pomb... 25 7.4
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 25 7.4
SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|c... 24 9.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 24 9.8
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 24 9.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 24 9.8
>SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase
Pin1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 175
Score = 77.0 bits (181), Expect = 1e-15
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 41 QEEILPEGWEARKSRSTGMTYYLNKHTKK---SQWEKPGGPASXXXXXXXXXXGEYRRKI 97
QE + P EA S ++ L KH + S W++ S Y + +
Sbjct: 53 QESVTPT--EASNSPKIRASHLLVKHRESRRPSSWKEEHITRSKEEARKLAE--HYEQLL 108
Query: 98 IDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDSGI 157
+LA SDCSSA+R G+LG F + +MQKPFED AF+LK G++S V T SG
Sbjct: 109 KSGSVSMHDLAMKESDCSSARRGGELGEFGRDEMQKPFEDAAFALKPGEISGVVETSSGF 168
Query: 158 HIILRTA 164
HII R A
Sbjct: 169 HIIQRHA 175
Score = 32.7 bits (71), Expect = 0.028
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP+ W + SRS Y+ N T +S WE P
Sbjct: 6 LPKPWIVKISRSRNRPYFFNTETHESLWEPP 36
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 25 NLLAFPAQRTNDMASTQEEI--LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
N A + M+S +++ LP GWE R++ S G TYY++ +T+ + W +P
Sbjct: 216 NTSALSNSNAHIMSSFEDQYGRLPPGWE-RRADSLGRTYYVDHNTRTTTWTRP 267
Score = 34.3 bits (75), Expect = 0.009
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGEYRRKII 98
LP GWE R + S + Y+++ +TK + W+ P P S ++RRK+I
Sbjct: 366 LPSGWEMRLTNSARV-YFVDHNTKTTTWDDPRLP-SALDQDVPQYKCDFRRKLI 417
Score = 32.7 bits (71), Expect = 0.028
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 37 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGP 78
M S LP GWE R + TG Y+++ +T+ + W P P
Sbjct: 300 MQSDSGNDLPFGWEMRYT-DTGRPYFVDHNTRTTTWVDPRNP 340
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 36.3 bits (80), Expect = 0.002
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 14 NEFSSRDGK--RKNL-LAFPAQ---RTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHT 67
N SSR G R N A PA RT Q LP GWE R++ + G TYY++ +T
Sbjct: 170 NPASSRAGSPTRDNAPAASPASSEPRTFSSFEDQYGRLPPGWE-RRTDNLGRTYYVDHNT 228
Query: 68 KKSQWEKP 75
+ + W +P
Sbjct: 229 RSTTWIRP 236
Score = 36.3 bits (80), Expect = 0.002
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGEYRRKII 98
LP GWE R + +T Y+++ +TK + W+ P P+S ++RRK+I
Sbjct: 347 LPSGWEMRLT-NTARVYFVDHNTKTTTWDDPRLPSSLDQNVPQYKR-DFRRKLI 398
>SPAC13C5.02 |dre4||DNA replication protein
Dre4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 32.3 bits (70), Expect = 0.037
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP GW K+ S G+ YY N KKS +++P
Sbjct: 5 LPPGWTEHKAPS-GIPYYWNAELKKSTYQRP 34
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 0.46
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 43 EILPEGWEARKSRSTGMTYYLNKHTK--KSQWEKP 75
E LP GW A+ G +Y+N+ + + QWE P
Sbjct: 8 EGLPSGWVAQWDAEYGTYFYVNESAQNPQPQWEPP 42
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 28.3 bits (60), Expect = 0.60
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 49 WEARKSRSTGMTYYLNKHTKKSQWEKP 75
W K+ + + YY N T+KS WEKP
Sbjct: 36 WHEVKTEDSRV-YYYNSVTRKSVWEKP 61
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.9 bits (59), Expect = 0.80
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 37 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKS--QWEKP 75
MA E LP GW A+ +Y+N+ K+ QWE P
Sbjct: 1 MAYQTREGLPNGWVAQWDERYKCYFYVNESDPKAKPQWECP 41
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 27.1 bits (57), Expect = 1.4
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 3 KTNNCLLVSEYNEFSSRDGKRKNLLAFPAQRTNDMASTQEEILPEGWEARKSRS-TGM-- 59
K++ L + N+ + GK+KN L + + A Q P + S TG
Sbjct: 9 KSSEVNLETSKNKEKNIKGKKKNSLDPIEKNKQETAGLQTTSRPTAKQLVGGSSWTGKIP 68
Query: 60 TYYLNKHTKKSQWEK 74
LN+H ++S+WEK
Sbjct: 69 VVLLNEHCQRSKWEK 83
>SPAC1B3.08 |||COP9 signalosome complex subunit 12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 423
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 102 AKFEELASTYSDCSSAKRDGDLGRFKK 128
+KF LAS Y + A + G+LG F K
Sbjct: 295 SKFPNLASVYIPLTRALKSGNLGEFGK 321
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.0 bits (52), Expect = 5.6
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 14 NEFSSRDGKRKNLLAFPAQRTNDMASTQEEILPEGWEARKSRST 57
N + D + +++A A T+ +EIL WEA RST
Sbjct: 1084 NPYEKYDKPKLDVVASAADITSKKLPVNQEILRNAWEA-SQRST 1126
>SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 281
Score = 24.6 bits (51), Expect = 7.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 96 KIIDREAKFEELASTYSDCSSAKRDGDLGRFKK 128
K+ + +A+ +E S+Y D +S + D DL + +K
Sbjct: 47 KLDEEQAEDDESLSSYEDYASRQIDDDLKKQRK 79
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 24.6 bits (51), Expect = 7.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 103 KFEELASTYSDCSSAKRDGD 122
KFE+ ++TYSD + K D D
Sbjct: 39 KFEQFSNTYSDATFIKVDVD 58
>SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 24.2 bits (50), Expect = 9.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 101 EAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDS 155
E F E+ T +D S L KG++ K ED+ L + + PV T+S
Sbjct: 51 ERLFREM--TENDPSLLSSSKTLAELSKGELAKAREDLKSVLSFLKNNLPVDTES 103
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 24.2 bits (50), Expect = 9.8
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 92 EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRF 126
EYR K+ D+E + E+ + + +D DL RF
Sbjct: 570 EYRNKLKDKEETYNEVMNAFQ-----YKDNDLRRF 599
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 42 EEILPEGWEARKSRSTGMTYYLNKHTKKSQW 72
E+ PE WE++ S YY KK ++
Sbjct: 430 EDFDPEKWESKMSEIFNENYYEEDSAKKPEF 460
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 24.2 bits (50), Expect = 9.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 93 YRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLS 148
Y I+ ++ E+L++ S+ + K + D K +++K + SLK + S
Sbjct: 310 YSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTS 365
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,190
Number of Sequences: 5004
Number of extensions: 25470
Number of successful extensions: 62
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 20
length of query: 164
length of database: 2,362,478
effective HSP length: 68
effective length of query: 96
effective length of database: 2,022,206
effective search space: 194131776
effective search space used: 194131776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 50 (24.2 bits)
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