Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000679-TA|BGIBMGA000679-PA|IPR001202|WW/Rsp5/WWP,
IPR000297|PpiC-type peptidyl-prolyl cis-trans isomerase
(164 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 42 3e-04
SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_13740| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 36 0.012
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 33 0.12
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 33 0.12
SB_52413| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16) 30 0.82
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 30 0.82
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037) 28 4.4
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_24447| Best HMM Match : TolA (HMM E-Value=1.3) 27 7.6
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 42 EEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
E LPEGW KSR G YY N T +S+W+ P
Sbjct: 80 EANLPEGWIISKSRQHGRMYYFNTETAESRWQHP 113
>SB_20015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP GWE R++ S G TYY++ +T+ + W++P
Sbjct: 415 LPHGWE-RRTDSRGRTYYVDHNTRTTTWQRP 444
Score = 36.3 bits (80), Expect = 0.012
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP GWE R + G Y++N +T+ +QWE P
Sbjct: 492 LPAGWEKRVE-TNGRVYFVNHNTRTTQWEDP 521
Score = 33.9 bits (74), Expect = 0.067
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 42 EEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
EE LP GWE R G YY++ +++ + WE+P
Sbjct: 380 EEPLPPGWEQRVDPH-GRIYYVDHNSRTTAWERP 412
>SB_13740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 38 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGEYRRKI 97
++ Q LPEGWE R+ + G T+Y++ T+ + W +P ++ G R
Sbjct: 177 SAEQPPPLPEGWEERQD-ANGRTFYIDHTTRTTTWVRPSSESTYQRELQREESGRARSFQ 235
Query: 98 IDREAKFEE 106
I R +E
Sbjct: 236 IRRHLSVDE 244
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 41 QEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
+E P GW R +Y N TKKSQWE P
Sbjct: 415 EESASPPGWSCHWDRKYKQYFYTNLETKKSQWEFP 449
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 29 FPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKPGG 77
F ++ ND +E + + W+A + ++ YY N+ T + QWE P G
Sbjct: 92 FQQEQDNDKEHDEEPMEEDPNYPWQACRDEASNCYYYWNQETNEVQWEMPPG 143
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP GWE ++TG +Y + +T+ + W P
Sbjct: 489 LPHGWEKAVDQTTGRIFYRDHNTQTTHWNPP 519
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 49 WEARKSRSTGMTYYLNKHTKKSQWEKP 75
W K+ S G TYY N T++S WEKP
Sbjct: 87 WLEHKT-SDGKTYYYNARTRESAWEKP 112
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 49 WEARKSRSTGMTYYLNKHTKKSQWEKP 75
W ++ S G Y+ N T +S WE+P
Sbjct: 419 WSEHRT-SDGRVYFYNSRTMQSTWERP 444
>SB_52413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 39 STQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
S+Q+ P+GWE +S G+ YY+N T SQ E P
Sbjct: 358 SSQQTESPDGWEQVESPQYGI-YYVNHATGSSQREHP 393
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 31.5 bits (68), Expect = 0.36
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 41 QEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
Q+ LP GWE ++G ++++ +T+ + W P
Sbjct: 4 QQHPLPNGWEMTVDPNSGRPFFIDHNTRTTTWTDP 38
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 31.1 bits (67), Expect = 0.47
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP GWE + G YY++ ++ ++ W P
Sbjct: 11 LPVGWEEARDTRDGRVYYIDHYSHRTTWIDP 41
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 40 TQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
+ E LP+GW +S TG YY + + +QWE+P
Sbjct: 1273 SNEYELPDGWMEVES-GTGSKYYWHVSSGTTQWERP 1307
>SB_44622| Best HMM Match : dsrm (HMM E-Value=3.1e-16)
Length = 724
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP+GW A RS G+ YL++ T+ W +P
Sbjct: 52 LPDGWLALNHRSGGI-IYLHRPTRVCTWSRP 81
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 30.3 bits (65), Expect = 0.82
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 32 QRTNDMASTQEEILPE-GWEARKSRSTGMTYYLNKHTKKSQWEKP 75
Q+ +++ + E IL W+ K+ S G YY N TK+S W +P
Sbjct: 194 QKPDELKTPSEIILDSFPWKEHKADS-GRVYYHNTETKESIWTEP 237
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 49 WEARKSRSTGMTYYLNKHTKKSQWEKP 75
W K+ G TY+ N +K S W+KP
Sbjct: 171 WTEHKAPD-GRTYFYNNDSKVSTWQKP 196
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 42 EEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
++ LP GWE G TYY++ KK+Q+E P
Sbjct: 327 DDELPYGWEKVDDPKYG-TYYIDHINKKTQFENP 359
>SB_57289| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.037)
Length = 396
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 5 NNCLLVSEYNEFSSRDGKRKNLLAFPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLN 64
NN L+SEY ++ K + + ++ +M +E++L E E +++ T L+
Sbjct: 15 NNQKLMSEYEKYQELQAKSQKMQEDYERQLTEMEEAREQVLEELTEYYENKLQEKTAQLD 74
Query: 65 KHTKKSQ 71
+ ++S+
Sbjct: 75 QSQEESR 81
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 38 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
A + LP W+ G YY + T+++QW+ P
Sbjct: 841 AKVKPRALPPNWKTATDPQ-GKIYYYHTLTRRTQWDPP 877
>SB_24447| Best HMM Match : TolA (HMM E-Value=1.3)
Length = 325
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHT 153
++ + K +S + AK D + KG++ P E LK G PVH+
Sbjct: 231 KKNAVKTGTKSSGSSSKFDLTPEAKLVSDNFKTNKGKLPWPVEKGYVYLKYGDQPHPVHS 290
Query: 154 DSGIH 158
+ +H
Sbjct: 291 NLTVH 295
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,251,557
Number of Sequences: 59808
Number of extensions: 192784
Number of successful extensions: 287
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 269
Number of HSP's gapped (non-prelim): 22
length of query: 164
length of database: 16,821,457
effective HSP length: 77
effective length of query: 87
effective length of database: 12,216,241
effective search space: 1062812967
effective search space used: 1062812967
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
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