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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000679-TA|BGIBMGA000679-PA|IPR001202|WW/Rsp5/WWP,
IPR000297|PpiC-type peptidyl-prolyl cis-trans isomerase
         (164 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024746-15|AAF60409.1|  168|Caenorhabditis elegans Hypothetical...    88   3e-18
AL117203-11|CAB55116.1|  126|Caenorhabditis elegans Hypothetical...    48   3e-06
AC024847-5|AAN73850.1|  792|Caenorhabditis elegans Ww domain pro...    42   2e-04
AC024847-4|AAN73849.1|  794|Caenorhabditis elegans Ww domain pro...    41   5e-04
AL034392-2|CAA22305.1|  120|Caenorhabditis elegans Hypothetical ...    38   0.004
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    36   0.014
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    36   0.014
AC084161-4|AAK29730.3|  724|Caenorhabditis elegans Hypothetical ...    35   0.033
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    31   0.31 
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    31   0.31 
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    31   0.31 
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr...    31   0.41 
Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical pr...    31   0.54 
AF016683-7|AAM97999.1|  609|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U41105-15|AAT81191.1|  298|Caenorhabditis elegans Hypothetical p...    28   3.8  
U41105-14|AAA82408.2|  399|Caenorhabditis elegans Hypothetical p...    28   3.8  
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z77652-5|CAB01118.2|  646|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical pr...    27   6.6  
L09634-2|AAA27966.1|  504|Caenorhabditis elegans Proteasome regu...    27   6.6  
AY652942-1|AAT73709.1|  684|Caenorhabditis elegans guanylate cyc...    27   6.6  
AJ133597-1|CAC35530.1|  684|Caenorhabditis elegans soluble guany...    27   6.6  
Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AY519857-1|AAR89638.1|  444|Caenorhabditis elegans nematode poly...    27   8.8  
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly...    27   8.8  
AF106581-3|AAO25985.1|  399|Caenorhabditis elegans Nematode poly...    27   8.8  
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly...    27   8.8  
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly...    27   8.8  

>AC024746-15|AAF60409.1|  168|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.13 protein.
          Length = 168

 Score = 88.2 bits (209), Expect = 3e-18
 Identities = 39/62 (62%), Positives = 49/62 (79%)

Query: 101 EAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDSGIHII 160
           E KF ELA  +SDCSSAKR GDLG F++ QMQKPFED +F+L+IG++S  V T SG+H+I
Sbjct: 105 EGKFRELAKQFSDCSSAKRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLI 164

Query: 161 LR 162
            R
Sbjct: 165 YR 166



 Score = 46.0 bits (104), Expect = 1e-05
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
          LP GWE R+SRS    YY N  T +SQWE+P
Sbjct: 6  LPAGWEKRQSRSNDRVYYFNTATGRSQWERP 36


>AL117203-11|CAB55116.1|  126|Caenorhabditis elegans Hypothetical
           protein Y48C3A.16 protein.
          Length = 126

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 103 KFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTD 154
           KF E+A+ YS+   A+  GDLG   +G M  PF+D AF+L      +P++TD
Sbjct: 58  KFNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKPIYTD 108


>AC024847-5|AAN73850.1|  792|Caenorhabditis elegans Ww domain
           protein (e3 ubiquitinligase) protein 1, isoform b
           protein.
          Length = 792

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 25/96 (26%), Positives = 39/96 (40%)

Query: 29  FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXX 88
           F  Q+ N  A      LPEGWE R+  +T   Y++N   + +QWE P             
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPRTQGGSDQPLPDG 369

Query: 89  XXGEYRRKIIDREAKFEELASTYSDCSSAKRDGDLG 124
               +  + +      +   +TY+D  + K  G LG
Sbjct: 370 WEMRFTEQGVPFFIDHQSKTTTYNDPRTGKPVGPLG 405



 Score = 38.3 bits (85), Expect = 0.003
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 38  ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           A+  EE LP+GWE R  +  G  YY++  TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250



 Score = 35.5 bits (78), Expect = 0.019
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 34  TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           T +  STQ   LP+GWE R+    G  YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284


>AC024847-4|AAN73849.1|  794|Caenorhabditis elegans Ww domain
           protein (e3 ubiquitinligase) protein 1, isoform a
           protein.
          Length = 794

 Score = 40.7 bits (91), Expect = 5e-04
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 29  FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           F  Q+ N  A      LPEGWE R+  +T   Y++N   + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356



 Score = 38.3 bits (85), Expect = 0.003
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 38  ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           A+  EE LP+GWE R  +  G  YY++  TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250



 Score = 35.5 bits (78), Expect = 0.019
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 34  TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           T +  STQ   LP+GWE R+    G  YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284


>AL034392-2|CAA22305.1|  120|Caenorhabditis elegans Hypothetical
           protein Y40B1A.2 protein.
          Length = 120

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 48  GWEARKSRSTGMTYYLNKHTKKSQWEKPG-GPASXXXXXXXXXXGEYRRKIIDREAKFEE 106
           GW  + S S+G  YY NK T+ SQW+KP   PA           G    K    E ++ E
Sbjct: 10  GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAEGGSAERDKPKGGVNEKPRFAEDRYNE 68

Query: 107 LASTYSDCSS 116
                S  SS
Sbjct: 69  YIGQLSSSSS 78


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 19   RDGKRKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 75
            R   +K  +    +R N+  + ++E L +    W   KS + G TYY NK TK++QW  P
Sbjct: 1319 RKTAQKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 35.9 bits (79), Expect = 0.014
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 19   RDGKRKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 75
            R   +K  +    +R N+  + ++E L +    W   KS + G TYY NK TK++QW  P
Sbjct: 1333 RKTAQKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391


>AC084161-4|AAK29730.3|  724|Caenorhabditis elegans Hypothetical
           protein Y92H12A.2 protein.
          Length = 724

 Score = 34.7 bits (76), Expect = 0.033
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 40  TQEEI--LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGEYRRKI 97
           T +EI  LP GWE R   + G  ++++ + +++QWE P                +Y+RK+
Sbjct: 316 TDDEIGALPAGWEQRV-HADGRVFFIDHNRRRTQWEDPRFENENIAGPAVPYSRDYKRKV 374



 Score = 29.1 bits (62), Expect = 1.6
 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 45  LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           LP+GW+ + + + G T++++  TK + W  P
Sbjct: 272 LPDGWDMQVAPN-GRTFFIDHRTKTTTWTDP 301


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 35   NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 75
            +D   T E  L +     W+   S+S  + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 35   NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 75
            +D   T E  L +     W+   S+S  + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 35   NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 75
            +D   T E  L +     W+   S+S  + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079


>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
           protein K01A6.2 protein.
          Length = 1092

 Score = 31.1 bits (67), Expect = 0.41
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 45  LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGG 77
           LP GWE    ++ G T+Y++   +K+Q+E+P G
Sbjct: 332 LPPGWEQVDDQNYG-TFYVDHINRKTQYERPYG 363


>Z22176-1|CAA80142.1|  724|Caenorhabditis elegans Hypothetical
           protein ZK1098.1 protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 58  GMTYYLNKHTKKSQWEKPGG 77
           G  YY N  TKK+QW KP G
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG 156


>AF016683-7|AAM97999.1|  609|Caenorhabditis elegans Hypothetical
           protein K09F6.9 protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 92  EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQ-MQKPFEDVAFSLKIGQLSQP 150
           E R+K I+ + K EE      D   A+RD  + R K+ + ++K   +    +K     + 
Sbjct: 205 EARKKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEEKMKKEDRERA 264

Query: 151 VHTDSGIHI 159
              D   HI
Sbjct: 265 TQKDRSDHI 273


>Z46241-4|CAA86318.1|  837|Caenorhabditis elegans Hypothetical
           protein C38D4.5 protein.
          Length = 837

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 45  LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
           L  GW   ++   G T++ NK T KSQW  P
Sbjct: 98  LLNGWFEYET-DVGRTFFFNKETGKSQWIPP 127


>U41105-15|AAT81191.1|  298|Caenorhabditis elegans Hypothetical
           protein T02G5.13b protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 94  RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 133
           R  I+D+E+  E  +S Y    +    GDL R ++ QM+K
Sbjct: 207 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 246


>U41105-14|AAA82408.2|  399|Caenorhabditis elegans Hypothetical
           protein T02G5.13a protein.
          Length = 399

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 94  RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 133
           R  I+D+E+  E  +S Y    +    GDL R ++ QM+K
Sbjct: 308 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 347


>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y116F11B.3 protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 61  YYLNKHTKKSQWEKPGGP 78
           ++  K  K SQW +PGGP
Sbjct: 564 FFQQKFYKNSQWARPGGP 581


>Z77652-5|CAB01118.2|  646|Caenorhabditis elegans Hypothetical
           protein C06B3.8 protein.
          Length = 646

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 37  MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 73
           M + + E  P G    K R    TY+L +  KKS WE
Sbjct: 563 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 599


>U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical
           protein ZC239.6 protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 92  EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDV 138
           EY  +++ REA+F  L     DC  A    D+G  +  +   P  D+
Sbjct: 66  EYLNQLL-REARFYGLVKLVRDCEQAIARLDVGSGRPSERADPLSDI 111


>L09634-2|AAA27966.1|  504|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 3 protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 91  GEYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKG--QMQKPFE 136
           GE   + + R+  + +  + Y D S   RDGD+ RF     Q +  FE
Sbjct: 308 GEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFE 355


>AY652942-1|AAT73709.1|  684|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 684

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 37  MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 73
           M + + E  P G    K R    TY+L +  KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637


>AJ133597-1|CAC35530.1|  684|Caenorhabditis elegans soluble
           guanylate cyclase protein.
          Length = 684

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 37  MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 73
           M + + E  P G    K R    TY+L +  KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637


>Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical
           protein F23D12.5 protein.
          Length = 867

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 2   FKTNNCLLVSEYNEFSSRDGKRKNLLAFPAQRTNDMASTQEEILP 46
           F TN+C  + +  +     G    +++     TND  ST E+ILP
Sbjct: 115 FITNDCTTIEQTAKIQEESGTDSLIVS-----TNDSGSTNEQILP 154


>U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical
           protein T10H10.3 protein.
          Length = 389

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 32  QRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPG 76
           +RT+ +     E L  GW+       G+ YY ++  K++Q+E PG
Sbjct: 236 RRTHWVHPFVHESLKPGWKKFFDPEKGVFYY-HEEMKRTQYEHPG 279


>U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical
          protein ZK1127.9e protein.
          Length = 604

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 58 GMTYYLNKHTKKSQWEKP 75
          G  YY N  T+++ WEKP
Sbjct: 22 GRKYYFNSITQENTWEKP 39


>U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical
          protein ZK1127.9c protein.
          Length = 693

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 58 GMTYYLNKHTKKSQWEKP 75
          G  YY N  T+++ WEKP
Sbjct: 22 GRKYYFNSITQENTWEKP 39


>U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical
           protein ZK1127.9a protein.
          Length = 914

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 58  GMTYYLNKHTKKSQWEKP 75
           G  YY N  T+++ WEKP
Sbjct: 243 GRKYYFNSITQENTWEKP 260


>U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical
           protein ZK1127.9b protein.
          Length = 905

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 58  GMTYYLNKHTKKSQWEKP 75
           G  YY N  T+++ WEKP
Sbjct: 234 GRKYYFNSITQENTWEKP 251


>AY519857-1|AAR89638.1|  444|Caenorhabditis elegans nematode
           polyprotein allergen related,post-translationnally
           cleaved, the diverse 14.5 kDa cleavageproducts bind
           lipids and retinol (51.7 kD) protein.
          Length = 444

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 94  RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
           RR++ + EA F+E A+ Y D  + ++  +L R K
Sbjct: 291 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 324


>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
            polyprotein allergen related,post-translationnally
            cleaved, the diverse 14.5 kDa cleavageproducts bind
            lipids and retinol (164.6 kD) protein.
          Length = 1440

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 94   RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
            RR++ + EA F+E A+ Y D  + ++  +L R K
Sbjct: 1287 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 1320


>AF106581-3|AAO25985.1|  399|Caenorhabditis elegans Nematode
           polyprotein allergen relatedprotein 1, isoform b
           protein.
          Length = 399

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 94  RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
           RR++ + EA F+E A+ Y D  + ++  +L R K
Sbjct: 246 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 279


>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
            polyprotein allergen relatedprotein 1, isoform c protein.
          Length = 1198

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 94   RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
            RR++ + EA F+E A+ Y D  + ++  +L R K
Sbjct: 1045 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 1078


>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
            polyprotein allergen relatedprotein 1, isoform a protein.
          Length = 1440

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 94   RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
            RR++ + EA F+E A+ Y D  + ++  +L R K
Sbjct: 1287 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 1320


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.314    0.130    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,888,150
Number of Sequences: 27539
Number of extensions: 142399
Number of successful extensions: 290
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 45
length of query: 164
length of database: 12,573,161
effective HSP length: 76
effective length of query: 88
effective length of database: 10,480,197
effective search space: 922257336
effective search space used: 922257336
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)

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