Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000679-TA|BGIBMGA000679-PA|IPR001202|WW/Rsp5/WWP,
IPR000297|PpiC-type peptidyl-prolyl cis-trans isomerase
(164 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 88 3e-18
AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical... 48 3e-06
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 42 2e-04
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 41 5e-04
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 38 0.004
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 36 0.014
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 36 0.014
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 35 0.033
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.31
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.31
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 1.2
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 28 3.8
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 28 3.8
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 27 5.0
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 27 6.6
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 27 6.6
L09634-2|AAA27966.1| 504|Caenorhabditis elegans Proteasome regu... 27 6.6
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 27 6.6
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 27 6.6
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 27 8.8
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 27 8.8
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 27 8.8
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 27 8.8
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 8.8
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 8.8
AY519857-1|AAR89638.1| 444|Caenorhabditis elegans nematode poly... 27 8.8
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 27 8.8
AF106581-3|AAO25985.1| 399|Caenorhabditis elegans Nematode poly... 27 8.8
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 27 8.8
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 27 8.8
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 101 EAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTDSGIHII 160
E KF ELA +SDCSSAKR GDLG F++ QMQKPFED +F+L+IG++S V T SG+H+I
Sbjct: 105 EGKFRELAKQFSDCSSAKRGGDLGPFERRQMQKPFEDASFALEIGEMSDIVDTSSGVHLI 164
Query: 161 LR 162
R
Sbjct: 165 YR 166
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP GWE R+SRS YY N T +SQWE+P
Sbjct: 6 LPAGWEKRQSRSNDRVYYFNTATGRSQWERP 36
>AL117203-11|CAB55116.1| 126|Caenorhabditis elegans Hypothetical
protein Y48C3A.16 protein.
Length = 126
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 103 KFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDVAFSLKIGQLSQPVHTD 154
KF E+A+ YS+ A+ GDLG +G M PF+D AF+L +P++TD
Sbjct: 58 KFNEVAAQYSE-DKARSGGDLGWMTRGSMVGPFQDAAFALSNSSCDKPIYTD 108
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 29 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXX 88
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPRTQGGSDQPLPDG 369
Query: 89 XXGEYRRKIIDREAKFEELASTYSDCSSAKRDGDLG 124
+ + + + +TY+D + K G LG
Sbjct: 370 WEMRFTEQGVPFFIDHQSKTTTYNDPRTGKPVGPLG 405
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 38 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 34 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 40.7 bits (91), Expect = 5e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 29 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 38 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.019
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 34 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 48 GWEARKSRSTGMTYYLNKHTKKSQWEKPG-GPASXXXXXXXXXXGEYRRKIIDREAKFEE 106
GW + S S+G YY NK T+ SQW+KP PA G K E ++ E
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAEGGSAERDKPKGGVNEKPRFAEDRYNE 68
Query: 107 LASTYSDCSS 116
S SS
Sbjct: 69 YIGQLSSSSS 78
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 19 RDGKRKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 75
R +K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1319 RKTAQKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 19 RDGKRKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 75
R +K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1333 RKTAQKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 34.7 bits (76), Expect = 0.033
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 40 TQEEI--LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGEYRRKI 97
T +EI LP GWE R + G ++++ + +++QWE P +Y+RK+
Sbjct: 316 TDDEIGALPAGWEQRV-HADGRVFFIDHNRRRTQWEDPRFENENIAGPAVPYSRDYKRKV 374
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
LP+GW+ + + + G T++++ TK + W P
Sbjct: 272 LPDGWDMQVAPN-GRTFFIDHRTKTTTWTDP 301
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 35 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 75
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 35 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 75
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.31
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 35 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 75
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.1 bits (67), Expect = 0.41
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGG 77
LP GWE ++ G T+Y++ +K+Q+E+P G
Sbjct: 332 LPPGWEQVDDQNYG-TFYVDHINRKTQYERPYG 363
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 58 GMTYYLNKHTKKSQWEKPGG 77
G YY N TKK+QW KP G
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG 156
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 92 EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQ-MQKPFEDVAFSLKIGQLSQP 150
E R+K I+ + K EE D A+RD + R K+ + ++K + +K +
Sbjct: 205 EARKKYIETQKKAEENEEKRRDAQKAERDAHIARHKQAEALEKEKREQEEKMKKEDRERA 264
Query: 151 VHTDSGIHI 159
D HI
Sbjct: 265 TQKDRSDHI 273
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 45 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 75
L GW ++ G T++ NK T KSQW P
Sbjct: 98 LLNGWFEYET-DVGRTFFFNKETGKSQWIPP 127
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 133
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 207 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 246
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQK 133
R I+D+E+ E +S Y + GDL R ++ QM+K
Sbjct: 308 RSSIMDKESVSEVCSSLYEFWDTIGESGDLERRRQDQMKK 347
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 61 YYLNKHTKKSQWEKPGGP 78
++ K K SQW +PGGP
Sbjct: 564 FFQQKFYKNSQWARPGGP 581
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 37 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 73
M + + E P G K R TY+L + KKS WE
Sbjct: 563 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 599
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 92 EYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKGQMQKPFEDV 138
EY +++ REA+F L DC A D+G + + P D+
Sbjct: 66 EYLNQLL-REARFYGLVKLVRDCEQAIARLDVGSGRPSERADPLSDI 111
>L09634-2|AAA27966.1| 504|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 3 protein.
Length = 504
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 91 GEYRRKIIDREAKFEELASTYSDCSSAKRDGDLGRFKKG--QMQKPFE 136
GE + + R+ + + + Y D S RDGD+ RF Q + FE
Sbjct: 308 GEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQFKTQFE 355
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 37 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 73
M + + E P G K R TY+L + KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 37 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 73
M + + E P G K R TY+L + KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical
protein F23D12.5 protein.
Length = 867
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 2 FKTNNCLLVSEYNEFSSRDGKRKNLLAFPAQRTNDMASTQEEILP 46
F TN+C + + + G +++ TND ST E+ILP
Sbjct: 115 FITNDCTTIEQTAKIQEESGTDSLIVS-----TNDSGSTNEQILP 154
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 32 QRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPG 76
+RT+ + E L GW+ G+ YY ++ K++Q+E PG
Sbjct: 236 RRTHWVHPFVHESLKPGWKKFFDPEKGVFYY-HEEMKRTQYEHPG 279
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 58 GMTYYLNKHTKKSQWEKP 75
G YY N T+++ WEKP
Sbjct: 22 GRKYYFNSITQENTWEKP 39
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 58 GMTYYLNKHTKKSQWEKP 75
G YY N T+++ WEKP
Sbjct: 22 GRKYYFNSITQENTWEKP 39
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 58 GMTYYLNKHTKKSQWEKP 75
G YY N T+++ WEKP
Sbjct: 243 GRKYYFNSITQENTWEKP 260
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 26.6 bits (56), Expect = 8.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 58 GMTYYLNKHTKKSQWEKP 75
G YY N T+++ WEKP
Sbjct: 234 GRKYYFNSITQENTWEKP 251
>AY519857-1|AAR89638.1| 444|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (51.7 kD) protein.
Length = 444
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
RR++ + EA F+E A+ Y D + ++ +L R K
Sbjct: 291 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 324
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
RR++ + EA F+E A+ Y D + ++ +L R K
Sbjct: 1287 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 1320
>AF106581-3|AAO25985.1| 399|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform b
protein.
Length = 399
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
RR++ + EA F+E A+ Y D + ++ +L R K
Sbjct: 246 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 279
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c protein.
Length = 1198
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
RR++ + EA F+E A+ Y D + ++ +L R K
Sbjct: 1045 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 1078
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a protein.
Length = 1440
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 94 RRKIIDREAKFEELASTYSDCSSAKRDGDLGRFK 127
RR++ + EA F+E A+ Y D + ++ +L R K
Sbjct: 1287 RRRVPNSEASFQEKAAKYLDWMNEEQLNELKRLK 1320
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,888,150
Number of Sequences: 27539
Number of extensions: 142399
Number of successful extensions: 290
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 45
length of query: 164
length of database: 12,573,161
effective HSP length: 76
effective length of query: 88
effective length of database: 10,480,197
effective search space: 922257336
effective search space used: 922257336
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -