GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000678-TA|BGIBMGA000678-PA|undefined
         (411 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    27   0.24 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 9   QNVTEFIDERTLCVTILPKVR-IIFENNQTDHKVVFLVLAYFERLLPRLERTHLLEHIIP 67
           QN+ +   E  +   ILP V+ ++ + NQ     +  V+     L P L R + +EH++P
Sbjct: 313 QNLDKAHQESIIMNNILPCVKELVADPNQHVKSALASVIM---GLSPILGRHNTIEHLLP 369

Query: 68  TLLT-LKLGDPEI 79
             LT LK   PE+
Sbjct: 370 LFLTQLKDECPEV 382


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 282 RRHSSIGPQERRGSTVNLSPPTGGSVPNTSS-SVPFLL 318
           +   S  PQ+R  S  +LS   G +VP +++ S P +L
Sbjct: 692 QNEKSPSPQQRSPSVTDLSTKDGTTVPESNNGSSPSVL 729


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.131    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,522
Number of Sequences: 317
Number of extensions: 2481
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 411
length of database: 114,650
effective HSP length: 58
effective length of query: 353
effective length of database: 96,264
effective search space: 33981192
effective search space used: 33981192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)