GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000678-TA|BGIBMGA000678-PA|undefined
         (411 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)

Query: 289 PQERRGSTVNLSPPTGGSVP 308
           PQ   GS++NLS P+ G VP
Sbjct: 599 PQPPAGSSLNLSHPSAGMVP 618


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 3.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 148  RTEAANPATDRYRSLRHQMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSN 207
            R+  A+P   + +S RHQ ++        N P L   QRK    E    +N  SG  + +
Sbjct: 1460 RSSPASPTPSK-KSKRHQSASP--IRHILNSPLLNRRQRKKQHTESSDDENGGSGGGSGS 1516

Query: 208  QTG 210
              G
Sbjct: 1517 GAG 1519


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 3.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 300  SPPTGGSVPNTSSSVPFLLASSMNSIKSRRQSGAA 334
            SPP    VP+T+   P  L +  N +K    +GAA
Sbjct: 1260 SPPASPLVPDTAVPDPHSLYAIPNKVKPSPLAGAA 1294


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.6
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 146 KLRTEAANPATDRYRSLRHQMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARK 197
           K R  A  P T   + L  ++  + +       PNL+V + K  S E+ + K
Sbjct: 624 KQRANAKTPETPSDQPLIKEVPMNKIQVGGAPSPNLKVVKSKIGSLENASHK 675


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.131    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,059
Number of Sequences: 2123
Number of extensions: 10239
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 6
length of query: 411
length of database: 516,269
effective HSP length: 66
effective length of query: 345
effective length of database: 376,151
effective search space: 129772095
effective search space used: 129772095
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)