Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000678-TA|BGIBMGA000678-PA|undefined
(411 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical pr... 34 0.21
AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 7.9
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 7.9
Z82073-2|CAB04925.1| 358|Caenorhabditis elegans Hypothetical pr... 29 7.9
AL132951-12|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 7.9
AL132951-11|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 7.9
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 29 7.9
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 7.9
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 7.9
AF038623-1|AAB94156.1| 346|Caenorhabditis elegans Seven tm rece... 29 7.9
>Z99171-5|CAB16311.1| 280|Caenorhabditis elegans Hypothetical
protein F47G4.5 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.21
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 136 VDAIDKSQRFKLRTEAANPATDRYRSLRHQMSTDNVTAPPFNIPNLRVEQRKTSSAEDMA 195
VD +R +++ + T Y S D T+PP IP++ + QR++SS
Sbjct: 40 VDRKRNPKRNQIQPQHNESITITYMGRPRSPSVDLPTSPP--IPSV-IRQRRSSSTVAKK 96
Query: 196 RKNSASGPSTSNQTGSISGLKRLGQW 221
SAS PS + GS S L G W
Sbjct: 97 LPQSASNPSFLRKQGSSSSLSN-GLW 121
>AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical
protein H37A05.2 protein.
Length = 419
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 78 EIIHRVVKLYRIMLAEKKFALTANVMALKMIPTLAP 113
E+ +R V +YRI++ EK T NV++L+ L+P
Sbjct: 112 ELHNREVDMYRIIMREKPACPTVNVLSLEAFTELSP 147
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 179 PNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSIS 213
P+L+ E +S+E+M KN S P +T S S
Sbjct: 29 PDLKAESEDVTSSEEMQNKNPVSAPEKRAKTASFS 63
>Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical
protein C53B4.3 protein.
Length = 415
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 160 RSLRHQMSTDNVTAPP--FNIPNLRVEQRKTSSAEDMARKNSASGP 203
+S H++STDN PP NI N+ +K A M +KN P
Sbjct: 195 KSYEHEISTDNANGPPPQINITNVVRILQKPGVANVMIKKNGGVVP 240
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 292 RRGSTVNLSPPTGGSVPNTSSSVPFLLASSMNSIKSRRQS 331
RR + +LSPP G VP+ S S P +ASS +S + ++S
Sbjct: 234 RRAQSASLSPPYG--VPSPSYSFPSSVASSASSSPAPQRS 271
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>Z82073-2|CAB04925.1| 358|Caenorhabditis elegans Hypothetical
protein W06D12.4 protein.
Length = 358
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 96 FALTANVMALKMIPTLAPQMVNTALTVDQFANLIELLHEIVDAIDK 141
F ++ N++ L ++ T +P+ V T + F L +LH + D I K
Sbjct: 19 FCVSCNILLLYLVYTKSPKHVGTYKYLMTFFALNGILHSVFDFITK 64
>AL132951-12|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>AL132951-11|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 165 QMSTDNVTAPPFNIPNLRVEQRKTSSAEDMARKNSASGPSTSNQTGSISGLKRL 218
QMS D V N + VEQR D+ +KN + TG++ G +L
Sbjct: 395 QMSHDQVAFLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTIYAGTGALDGKSKL 448
>AF038623-1|AAB94156.1| 346|Caenorhabditis elegans Seven tm
receptor protein 170 protein.
Length = 346
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 89 IMLAEKKFALTANVMALKMIPTLAPQMVNTALTVDQFANLIELLHEIVDAIDK 141
I L FALT+N + + +I T +P+ + T ++ + +I L+ +D I K
Sbjct: 13 IQLISYCFALTSNTLLIFLIVTKSPKKMGTYRSLMCYFCIISLIFTTLDVIVK 65
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.131 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,822,993
Number of Sequences: 27539
Number of extensions: 269617
Number of successful extensions: 929
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 918
Number of HSP's gapped (non-prelim): 14
length of query: 411
length of database: 12,573,161
effective HSP length: 83
effective length of query: 328
effective length of database: 10,287,424
effective search space: 3374275072
effective search space used: 3374275072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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