GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000677-TA|BGIBMGA000677-PA|undefined
         (144 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   3.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   3.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   10.0 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   10.0 

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 3   TSLDSALDPMEEIRFRKKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPA-ASDL 61
           TSLD+A +    I  R   G     I       F  +    V+   +++R + P+  + +
Sbjct: 32  TSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRINTM 91

Query: 62  ISRSHFRDVLHTGLGM 77
           +      D+L T L M
Sbjct: 92  LMHLAIADLLVTFLMM 107


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 3   TSLDSALDPMEEIRFRKKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPA-ASDL 61
           TSLD+A +    I  R   G     I       F  +    V+   +++R + P+  + +
Sbjct: 32  TSLDNATEHKLPISMRFNEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRINTM 91

Query: 62  ISRSHFRDVLHTGLGM 77
           +      D+L T L M
Sbjct: 92  LMHLAIADLLVTFLMM 107


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 40  EKIMVIFFKIQKRDEKPAASDLI 62
           E I++ F K  +RDEKP + + I
Sbjct: 385 ELIVIQFRKKMERDEKPYSRNSI 407


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 20  KHGSMWMEIQKDTHFTFDELE 40
           K G +  +IQ + H   DE+E
Sbjct: 310 KAGELIHQIQTEDHDIIDEIE 330


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 20  KHGSMWMEIQKDTHFTFDELE 40
           K G +  +IQ + H   DE+E
Sbjct: 341 KAGELIHQIQTEDHDIIDEIE 361


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.135    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,232
Number of Sequences: 317
Number of extensions: 847
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 144
length of database: 114,650
effective HSP length: 51
effective length of query: 93
effective length of database: 98,483
effective search space:  9158919
effective search space used:  9158919
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)