Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000677-TA|BGIBMGA000677-PA|undefined
(144 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g36160.1 68418.m04357 aminotransferase-related similar to nic... 30 0.53
At5g62100.2 68418.m07795 BAG domain-containing protein similar t... 29 1.2
At5g62100.1 68418.m07794 BAG domain-containing protein similar t... 29 1.2
At1g19220.1 68414.m02392 transcriptional factor B3 family protei... 29 1.2
At5g55990.1 68418.m06986 calcineurin B-like protein 2 (CBL2) ide... 29 1.6
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 29 1.6
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 29 1.6
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 29 1.6
At1g73570.1 68414.m08517 suppressor of lin-12-like protein-relat... 28 2.1
At5g52060.1 68418.m06462 BAG domain-containing protein contains ... 28 2.8
At2g37630.1 68415.m04616 myb family transcription factor (MYB91)... 28 2.8
At5g17910.1 68418.m02100 expressed protein 27 4.9
At1g71990.1 68414.m08321 alpha-(1,4)-fucosyltransferase / galact... 27 6.5
At1g09310.1 68414.m01042 expressed protein contains Pfam profile... 27 6.5
At5g65570.1 68418.m08250 pentatricopeptide (PPR) repeat-containi... 26 8.6
At2g32070.1 68415.m03919 CCR4-NOT transcription complex protein,... 26 8.6
>At5g36160.1 68418.m04357 aminotransferase-related similar to
nicotianamine aminotransferase B GI:6469087 from
[Hordeum vulgare subsp. vulgare]
Length = 420
Score = 30.3 bits (65), Expect = 0.53
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 60 DLISRSHFRDVLHTGLGMTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEER 118
++ SR H + + T + + + V G P+V+MA FA+ + + + G I +R
Sbjct: 195 NVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAELVPVIVLGAISKR 253
>At5g62100.2 68418.m07795 BAG domain-containing protein similar to
BAG domain containing proteins (At5g07220, At5g52060)
Length = 285
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 15 IRFRKKHGSMWMEIQKDTHFTFDELEKIM 43
IR R K+GS+ EI ++ TF EL+KI+
Sbjct: 39 IRVRVKYGSVHHEISINSQSTFGELKKIL 67
>At5g62100.1 68418.m07794 BAG domain-containing protein similar to
BAG domain containing proteins (At5g07220, At5g52060)
Length = 296
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 15 IRFRKKHGSMWMEIQKDTHFTFDELEKIM 43
IR R K+GS+ EI ++ TF EL+KI+
Sbjct: 39 IRVRVKYGSVHHEISINSQSTFGELKKIL 67
>At1g19220.1 68414.m02392 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 1086
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 19 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASD--LISRSHFRDVLHTG 74
+K GS+ I + +DEL + F I+ + E P SD L+ H D+L G
Sbjct: 964 QKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVG 1021
>At5g55990.1 68418.m06986 calcineurin B-like protein 2 (CBL2)
identical to calcineurin B-like protein 2 GI:3309084
from [Arabidopsis thaliana]
Length = 226
Score = 28.7 bits (61), Expect = 1.6
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 28 IQKDTHFTFDELEKIMVIFFKIQKRDEKPAASDLISRSHFRDVLHTGLGMTDSYMMERVM 87
+ +DT F+ E+E + +F KI LI++ F+ L +S +RV
Sbjct: 36 LARDTVFSVSEIEALYELFKKI---SSAVIDDGLINKEEFQLALFK-TNKKESLFADRVF 91
Query: 88 VALDRGTSPYVTMATFAKAISLY-LRGDIEERIAYAF 123
D + + FA+A+S++ I+++I ++F
Sbjct: 92 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSF 128
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 19 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASD--LISRSHFRDVLHTG 74
+K GS+ I + + +DEL + F I+ + E P SD L+ H D+L G
Sbjct: 1044 QKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVG 1101
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 19 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASD--LISRSHFRDVLHTG 74
+K GS+ I + + +DEL + F I+ + E P SD L+ H D+L G
Sbjct: 1043 QKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVG 1100
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 19 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASD--LISRSHFRDVLHTG 74
+K GS+ I + + +DEL + F I+ + E P SD L+ H D+L G
Sbjct: 1044 QKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVG 1101
>At1g73570.1 68414.m08517 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 604
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 70 VLHTGLGMTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDI 115
+ HTG+G+T + M L P+ +++ + A+ YL+GD+
Sbjct: 355 MFHTGVGLTKNLEMATTFYKLVAERGPWSSLSRW--ALEAYLKGDV 398
>At5g52060.1 68418.m06462 BAG domain-containing protein contains
Pfam:PF02179 BAG domain
Length = 326
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 11 PMEEIRFRKKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEK 55
P IR R K+G+++ EI +F EL+K++ I +D+K
Sbjct: 47 PPPMIRVRIKYGAVYHEINISPQASFGELKKMLTGPTGIHHQDQK 91
>At2g37630.1 68415.m04616 myb family transcription factor (MYB91)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 367
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 15 IRFRKKHGSMWMEIQKDT-HFTFDELEKIMVIFFKIQKRDEK 55
IR ++KHG+ W +I + T L K +F + Q+R+EK
Sbjct: 71 IRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEK 112
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 27 EIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASD 60
EI++DTH F+E I+ + K + DEK +D
Sbjct: 166 EIKRDTHVRFEEKAFILDVEKKGDREDEKLIEND 199
>At1g71990.1 68414.m08321 alpha-(1,4)-fucosyltransferase /
galactoside 3(4)-L-fucosyltransferase (FUT13) (FucTC)
identical to SP|Q9C8W3 Alpha-(1,4)-fucosyltransferase
(EC 2.4.1.-) (FT4-M) (Galactoside 3(4)-
L-fucosyltransferase) (FucTC) (AtFUT13) {Arabidopsis
thaliana}; identical to cDNA alpha1,3-fucosyltransferase
homologue (FucTC) GI:13992485
Length = 401
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 65 SHFRDVLHTGLGMTDSYMMERVMVALDRGTSP 96
SH++ VL +SY+ E++ ALD G+ P
Sbjct: 283 SHYKFVLAIENTAVESYVTEKLFYALDSGSVP 314
>At1g09310.1 68414.m01042 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 179
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/35 (25%), Positives = 22/35 (62%)
Query: 9 LDPMEEIRFRKKHGSMWMEIQKDTHFTFDELEKIM 43
L +EE+ + ++ G +W++ +K F E++K++
Sbjct: 41 LKDIEEVGYDRESGVVWLKQKKSITHKFTEIDKLV 75
>At5g65570.1 68418.m08250 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 738
Score = 26.2 bits (55), Expect = 8.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 12 MEEIRFRKKHGSMWMEIQKDTH 33
M++++ +K W+EI K+TH
Sbjct: 595 MKDMKLKKNPAMSWVEINKETH 616
>At2g32070.1 68415.m03919 CCR4-NOT transcription complex protein,
putative similar to SWISS-PROT:Q60809 CCR4-NOT
transcription complex, subunit 7 (CCR4-associated factor
1, (CAF1) [Mus musculus]
Length = 275
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 56 PAASDLISRSHFRDVLHTGLG-MTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRGD 114
P D+ F + LH GL + + +ERV + G+ +T TF K + G
Sbjct: 196 PRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFFIGS 255
Query: 115 IEE 117
+E+
Sbjct: 256 MEK 258
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.135 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,858,193
Number of Sequences: 28952
Number of extensions: 98782
Number of successful extensions: 289
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 281
Number of HSP's gapped (non-prelim): 16
length of query: 144
length of database: 12,070,560
effective HSP length: 75
effective length of query: 69
effective length of database: 9,899,160
effective search space: 683042040
effective search space used: 683042040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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