GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000675-TA|BGIBMGA000675-PA|IPR004837|Sodium/calcium
exchanger membrane region, IPR004481|K+-dependent Na+/Ca+ exchanger
related-protein
         (422 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    27   1.3  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    27   1.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   5.1  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   9.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   9.0  

>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 71  FGIY--TFTLLAIVCNDYFIPCVELICEDLKIPQNVAAATFMSVATSCPEFFV 121
           FG+Y  +F L+ I  + YF     L   + +    +AAA  MS   S P+ F+
Sbjct: 130 FGLYLSSFILICISVDRYFAVLKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFI 182


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 71  FGIY--TFTLLAIVCNDYFIPCVELICEDLKIPQNVAAATFMSVATSCPEFFV 121
           FG+Y  +F L+ I  + YF     L   + +    +AAA  MS   S P+ F+
Sbjct: 130 FGLYLSSFILICISVDRYFAVLKPLKVHEHRAVLMIAAAWIMSGLCSLPQAFI 182


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 62  QGAFLLYVVFGIYTFTLLAIV 82
           +GA +LY VFG ++   LAI+
Sbjct: 781 KGAIMLYFVFGAWSLFTLAIL 801


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query: 238 LNDNNVSVEEGIDNKGFNDPSPVTNGTTMTEKPAIDE 274
           ++D N   ++ ID+K + DP+ +       +  A++E
Sbjct: 160 IDDENPKFDKNIDDKEYVDPTKIKEELAKKKMEAMNE 196


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 10  NKLELEDTTWHWKPWLRTRIEVVDNVAHEVVC 41
           N L  E TT HW    + R   +D V H   C
Sbjct: 369 NHLMGESTTIHWHGLHQRRTPYMDGVPHVSQC 400



 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 254 FNDPSPVTNGTTMTEKPAID 273
           F   +P+T  TT TE+PA++
Sbjct: 501 FAKTTPLTTTTTSTEEPALE 520


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.142    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,096
Number of Sequences: 2123
Number of extensions: 14528
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 6
length of query: 422
length of database: 516,269
effective HSP length: 66
effective length of query: 356
effective length of database: 376,151
effective search space: 133909756
effective search space used: 133909756
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 49 (23.8 bits)