GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000674-TA|BGIBMGA000674-PA|IPR001873|Na+ channel,
amiloride-sensitive
         (317 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    61   3e-11
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    61   3e-11
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    28   0.30 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.5  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   8.5  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 31/130 (23%), Positives = 59/130 (45%)

Query: 20  NTPLPRRVASCGYQTALTVLIKTDPLDYYSASVASQGVLVFIDDSYNLPDLDSPVRMVNP 79
           N   PR +A  G    L +++  +  DY+ +S +S G  +        P +    + +  
Sbjct: 259 NASYPRFIAGPGVAMGLAMVLDANASDYFCSSTSSVGFKIIFHSPSETPKITDYAQYIPV 318

Query: 80  SSEVFIALSPERTYSTPGVKGFPPEQRQCYFKDEVKIANFRQYSFHNCIVYRKLKSIKDA 139
            +E  I ++P+   +   ++     QRQC F  E  ++ +  YS +NC +  + K I + 
Sbjct: 319 GTENRIIITPKINDAADQIRKVAQAQRQCVFASEANLSYYSVYSRNNCELECEAKLILEN 378

Query: 140 CNCAPFFLSK 149
           C C  ++L K
Sbjct: 379 CGCVLYYLPK 388


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 31/130 (23%), Positives = 59/130 (45%)

Query: 20  NTPLPRRVASCGYQTALTVLIKTDPLDYYSASVASQGVLVFIDDSYNLPDLDSPVRMVNP 79
           N   PR +A  G    L +++  +  DY+ +S +S G  +        P +    + +  
Sbjct: 259 NASYPRFIAGPGVAMGLAMVLDANASDYFCSSTSSVGFKIIFHSPSETPKITDYAQYIPV 318

Query: 80  SSEVFIALSPERTYSTPGVKGFPPEQRQCYFKDEVKIANFRQYSFHNCIVYRKLKSIKDA 139
            +E  I ++P+   +   ++     QRQC F  E  ++ +  YS +NC +  + K I + 
Sbjct: 319 GTENRIIITPKINDAADQIRKVAQAQRQCVFASEANLSYYSVYSRNNCELECEAKLILEN 378

Query: 140 CNCAPFFLSK 149
           C C  ++L K
Sbjct: 379 CGCVLYYLPK 388


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 176 YPLEVALGKLASNMHLNRLPFFN-EVDLVNQSVLNVFFNDLVSTRYRRDVYLNWQNILA 233
           YP EV   + A      R  +   + D + +  LN++ N+L + RYR D +L  Q IL+
Sbjct: 253 YPSEVLNVRTAIATGFGRTEYLGAKSDELRKVALNIYNNELCAERYRYDRHLR-QGILS 310


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 145 FFLSKGPKSIKNHNTTLVDDLH 166
           F   K P  I+NH   L  DLH
Sbjct: 357 FLFMKRPPYIENHRKLLSKDLH 378


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 145 FFLSKGPKSIKNHNTTLVDDLH 166
           F   K P  I+NH   L  DLH
Sbjct: 357 FLFMKRPPYIENHRKLLSKDLH 378


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 103 PEQRQCYFKDEVKIANFRQYSFH 125
           PEQR  YF++++ + N   + +H
Sbjct: 192 PEQRLAYFREDIGV-NLHHWHWH 213


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.140    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,937
Number of Sequences: 2123
Number of extensions: 14412
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 6
length of query: 317
length of database: 516,269
effective HSP length: 64
effective length of query: 253
effective length of database: 380,397
effective search space: 96240441
effective search space used: 96240441
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 48 (23.4 bits)