Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000674-TA|BGIBMGA000674-PA|IPR001873|Na+ channel,
amiloride-sensitive
(317 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40413-5|AAK39175.1| 599|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical pr... 39 0.004
U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical pr... 37 0.022
AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical ... 36 0.029
X53314-1|CAA37396.1| 294|Caenorhabditis elegans deg-1 product p... 36 0.038
U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical pr... 36 0.038
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 36 0.038
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 36 0.038
U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical pr... 35 0.066
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 34 0.12
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical... 33 0.27
AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical... 33 0.27
AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical... 33 0.27
Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical pr... 32 0.47
AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein. 32 0.47
Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical pr... 32 0.62
X58982-1|CAA41731.1| 498|Caenorhabditis elegans degenerin protein. 31 0.82
U58726-8|AAB00580.3| 768|Caenorhabditis elegans Mechanosensory ... 31 0.82
U53669-1|AAC47265.1| 768|Caenorhabditis elegans MEC-4 protein. 31 0.82
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 30 1.9
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 30 1.9
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 30 1.9
AF016686-9|AAB66242.1| 300|Caenorhabditis elegans Hypothetical ... 30 1.9
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z47070-6|CAM84806.1| 212|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 2.5
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 30 2.5
Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U40413-5|AAK39175.1| 599|Caenorhabditis elegans Hypothetical
protein C18B2.6 protein.
Length = 599
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 145 FFLSKGPKSIKNHNTTLVDDL--HCLPECEHFDYPLEVALGKLASNMHLNRLPFFNEVDL 202
FF P+ N + +VD C C ++Y +V+ + S LP +
Sbjct: 410 FFTKLFPED-SNLSKAIVDACKKECKAPCHAWNYNKQVSYSSIPSEASKKLLPREEWEKM 468
Query: 203 VNQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIF---LVL 259
+ +L++++++L T + + + +++A GG SL G +LIS +VI+ V+
Sbjct: 469 KRKIILDIYYSELDYTIIKHVIAMPLSSLIAQIGGQFSLFAGGSLISLCQIVIYSVRYVM 528
Query: 260 HVFYGL 265
H F GL
Sbjct: 529 HKFCGL 534
>Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical
protein F23B2.3 protein.
Length = 626
Score = 39.1 bits (87), Expect = 0.004
Identities = 53/258 (20%), Positives = 104/258 (40%), Gaps = 34/258 (13%)
Query: 56 GVLVFIDDSYNLPDLDSPVRMVNPSSEVFIALSPERTYSTPGVKGFPPEQRQCYFKDEVK 115
G F+ +P+L S V+P+S + A+S R P P + C
Sbjct: 302 GFRYFVHPKDTIPNLASDEYTVSPNSVAYSAISKFRYVLLP-----PNDWGNCTEDYPYG 356
Query: 116 IANFRQYSFHNCIVYRKLKSIKDACNCAPFFLSKGPK----------SIKNHNTTLVDD- 164
I + Y+ NC+ K K + C C P + G + N++ +L+++
Sbjct: 357 IQSNLSYTSGNCLSLCKAKYFMNQCGCTPALYNIGNNFQECTPFETYNCVNNSLSLLNEE 416
Query: 165 -----------LHCLPECEHFDYPLEVALGKLASNMHLNRLPFFNE---VDLV--NQSVL 208
C +C+ Y + + G S N N VD + N ++
Sbjct: 417 TGKMEFQPPSCTRCGQQCDSQVYRADNSNGNQFSAGAFNYFNSKNSSWSVDYMKSNFQMI 476
Query: 209 NVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFL--VLHVFYGLI 266
+F+ D+ T Y + + ++L+A GG + + LG ++I+ +L +F V + +
Sbjct: 477 RIFYRDMSYTEYNQVQDASITDLLSAIGGNMGMFLGGSVITIVELFLFFSKVFWIGFSKT 536
Query: 267 QIIFVYKNKYVQKINVQE 284
+ ++Y + +K + +E
Sbjct: 537 RRNYLYSKRANEKAHKKE 554
>U88310-3|AAB42337.1| 608|Caenorhabditis elegans Hypothetical
protein C24G7.1 protein.
Length = 608
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/87 (20%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 204 NQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFY 263
N ++++F+ D+ +T Y + + ++L+ GG + + LG +LI+ ++ ++ ++
Sbjct: 468 NFQIIHIFYQDMSNTEYNQVQDASISDLLSNIGGNMGMFLGMSLITITEICLYFSKIIWL 527
Query: 264 GLIQIIFVYKNKYVQKINVQERNSHKE 290
G+ + + +Y+ V E+ KE
Sbjct: 528 GISK----KRREYMYSKRVHEKTHKKE 550
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 56 GVLVFIDDSYNLPDLDSPVRMVNPSSEVFIALSPERTYSTPGVK-GFPPEQRQCYFKDEV 114
G F+ +P L S V P+S + A+S ER P K G E K ++
Sbjct: 299 GFQYFVHPPNTIPHLSSDEFTVTPNSVAYTAISSERFELLPTNKWGNCTEHYPSGIKSDL 358
Query: 115 KIANFRQYSFHNCIVYRKLKSIKDACNCAP 144
Y NC+ K K + C C P
Sbjct: 359 P------YLTGNCVSLCKAKFFMENCGCTP 382
>AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical
protein T28F2.7 protein.
Length = 684
Score = 36.3 bits (80), Expect = 0.029
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 203 VNQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFL 257
+N V+NVFF D+ T Y + ++ +L+ GG + + +G ++ + +L +FL
Sbjct: 485 LNFQVVNVFFRDMSYTEYIQKRGMSLTELLSDIGGNMGMFMGMSVFTIIELFLFL 539
>X53314-1|CAA37396.1| 294|Caenorhabditis elegans deg-1 product
protein.
Length = 294
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 156 NHNTTLVDDLHCLPECEHFDYPLEVALGKLASNM-HLNRLPFFNEVDL-----VNQSVLN 209
+H T +D C CE + + + K S L E + +N +++
Sbjct: 140 HHITQKMDKCVCKQSCEEIIHEVTFSCSKWPSGATDLGDCDGMTESECEQYYRLNAAMIE 199
Query: 210 VFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
VF+ L + N++A FGG L L LGF++I+ ++ + LV
Sbjct: 200 VFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSVITVMEVCVLLV 248
>U88310-1|AAB42340.1| 663|Caenorhabditis elegans Hypothetical
protein C24G7.4 protein.
Length = 663
Score = 35.9 bits (79), Expect = 0.038
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 119 FRQYSFHNCIVYRKLKSIKDACNCAPFFLS-KGPKSI----------KNH-----NTT-- 160
F YS C + D C CAPF + G K I NH N T
Sbjct: 343 FLSYSASACRALCIAQFFNDTCGCAPFTYNVDGRKKICAPYESITCMDNHMLKKVNGTDY 402
Query: 161 --LVDDLHCLPECEHFDYPLEVALG---KLASNMHLNRLPFFNEVDLVNQ-SVLNVFFND 214
L D C EC+ Y + G S L ++ +E + N +V+N+FF +
Sbjct: 403 LELPDCEECHMECQSTSYTSYNSYGDGFNRGSLEWLKKISNKSETHIKNNVAVINIFFLE 462
Query: 215 LVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIF 256
+ T Y + + IL+ GG + + LG ++I+ +L +F
Sbjct: 463 MFYTSYSQVQATSLTEILSDIGGNMGMFLGMSVITITELSLF 504
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 156 NHNTTLVDDLHCLPECEHFDYPLEVALGKLASNM-HLNRLPFFNEVDL-----VNQSVLN 209
+H T +D C CE + + + K S L E + +N +++
Sbjct: 624 HHITQKMDKCVCKQSCEEIIHEVTFSCSKWPSGATDLGDCDGMTESECEQYYRLNAAMIE 683
Query: 210 VFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
VF+ L + N++A FGG L L LGF++I+ ++ + LV
Sbjct: 684 VFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSVITVMEVCVLLV 732
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 156 NHNTTLVDDLHCLPECEHFDYPLEVALGKLASNM-HLNRLPFFNEVDL-----VNQSVLN 209
+H T +D C CE + + + K S L E + +N +++
Sbjct: 624 HHITQKMDKCVCKQSCEEIIHEVTFSCSKWPSGATDLGDCDGMTESECEQYYRLNAAMIE 683
Query: 210 VFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
VF+ L + N++A FGG L L LGF++I+ ++ + LV
Sbjct: 684 VFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFSVITVMEVCVLLV 732
>U88310-2|AAB42338.2| 635|Caenorhabditis elegans Hypothetical
protein C24G7.2 protein.
Length = 635
Score = 35.1 bits (77), Expect = 0.066
Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 36/262 (13%)
Query: 56 GVLVFIDDSYNLPDLDSPVRMVNPSSEVFIALSPERTYSTPGVKGFPPEQRQCYFKDEVK 115
G F+ +P L S V+P++ F A+S +R P + + F D ++
Sbjct: 314 GFRYFVHPPNTIPHLSSDEFTVSPNTVAFSAISSDRYVLLPTHQWGNCTEN---FPDGIQ 370
Query: 116 IANFRQYSFHNCIVYRKLKSIKDACNCAP--FFLSKGPKSIKNHNTTL-VDDL------- 165
+N YS NC+ K K + C C P + + K + TT +D++
Sbjct: 371 -SNL-SYSSGNCLSLCKAKFYMENCGCTPALYNIENNLKECTPYETTTCLDNILAKPNKE 428
Query: 166 ------------HCLPECEHFDYPLEVALGKLASNMHLNRLPFFNE--VD---LVNQSVL 208
C +C Y + G S + L N D N ++
Sbjct: 429 TGKIEFQTPNCKACAQQCNSLVYRAYNSYGSQFSAGAFHYLKSINPEWTDGHMRANFQMI 488
Query: 209 NVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQI 268
N+F+ D+ T Y + + +L+ GG + + LG ++I+ ++ +F + G +
Sbjct: 489 NIFYRDMSYTEYNQVQDASVTQLLSDIGGNMGMFLGMSVITITEICLFFSKMFWLGFSK- 547
Query: 269 IFVYKNKYVQKINVQERNSHKE 290
+ Y+ V E+ +E
Sbjct: 548 ---KRRDYMYSKRVNEKTHERE 566
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 206 SVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGL 265
S++ V+F L W N+L+ FGG L L +G ++I+ ++ F VF L
Sbjct: 701 SMIEVYFEQLNYESLLESEAYGWSNLLSDFGGQLGLWMGVSVITIGEVACFF-FEVFISL 759
Query: 266 I 266
I
Sbjct: 760 I 760
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 33.5 bits (73), Expect = 0.20
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 126 NCIVYRKLKSIKDACNCAPFFLSKGPKSIKNHNTTLVDDLHCLPECEHFDYPLEVALGKL 185
NC +++ I+DAC+C P LS K +D+ P C++ ++V G
Sbjct: 338 NCRSRCRMEMIRDACHCTPLSLSYLAKK---------EDMEIFPLCDYTQCTVDVQKGNY 388
Query: 186 ASNMHLNR-LPFFNEVDL-VNQSVLNVFFN---DLVSTRYRRDVYL----NWQ----NIL 232
+ N+ P ++ V+ SV LV + YL W+ + +
Sbjct: 389 SDTECANKCFPDCRQIRFEVDHSVKGRMLRPDLTLVELSWGPFEYLTMEQQWKYSATSFI 448
Query: 233 AAFGGLLSLMLGFTLISGFDLVIF 256
AA GG + + LG +++S LV +
Sbjct: 449 AALGGSIGMWLGLSILSLIQLVTY 472
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 33.5 bits (73), Expect = 0.20
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 126 NCIVYRKLKSIKDACNCAPFFLSKGPKSIKNHNTTLVDDLHCLPECEHFDYPLEVALGKL 185
NC +++ I+DAC+C P LS K +D+ P C++ ++V G
Sbjct: 338 NCRSRCRMEMIRDACHCTPLSLSYLAKK---------EDMEIFPLCDYTQCTVDVQKGNY 388
Query: 186 ASNMHLNR-LPFFNEVDL-VNQSVLNVFFN---DLVSTRYRRDVYL----NWQ----NIL 232
+ N+ P ++ V+ SV LV + YL W+ + +
Sbjct: 389 SDTECANKCFPDCRQIRFEVDHSVKGRMLRPDLTLVELSWGPFEYLTMEQQWKYSATSFI 448
Query: 233 AAFGGLLSLMLGFTLISGFDLVIF 256
AA GG + + LG +++S LV +
Sbjct: 449 AALGGSIGMWLGLSILSLIQLVTY 472
>AL034393-26|CAI59121.1| 936|Caenorhabditis elegans Hypothetical
protein Y18D10A.7c protein.
Length = 936
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 224 VYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIFVYKNKYVQKINVQ 283
+YL + + AAF G+ L +GF D V+ +VL + Y ++Q+I + + ++ ++
Sbjct: 553 IYLAY--LAAAFYGVKHLKIGF------DFVVTVVLTIKYKVLQLINIVQEDSASRVFLE 604
Query: 284 ERNSHKEAWIMPRPTDAIDRKTRNDPLYSN 313
R + P T +D N P +SN
Sbjct: 605 VREQ-----LFPEDTKLMDIAVMNSPNFSN 629
>AL034393-25|CAI59120.1| 797|Caenorhabditis elegans Hypothetical
protein Y18D10A.7b protein.
Length = 797
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 224 VYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIFVYKNKYVQKINVQ 283
+YL + + AAF G+ L +GF D V+ +VL + Y ++Q+I + + ++ ++
Sbjct: 537 IYLAY--LAAAFYGVKHLKIGF------DFVVTVVLTIKYKVLQLINIVQEDSASRVFLE 588
Query: 284 ERNSHKEAWIMPRPTDAIDRKTRNDPLYSN 313
R + P T +D N P +SN
Sbjct: 589 VREQ-----LFPEDTKLMDIAVMNSPNFSN 613
>AL034393-24|CAA22312.3| 833|Caenorhabditis elegans Hypothetical
protein Y18D10A.7a protein.
Length = 833
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 224 VYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIFVYKNKYVQKINVQ 283
+YL + + AAF G+ L +GF D V+ +VL + Y ++Q+I + + ++ ++
Sbjct: 553 IYLAY--LAAAFYGVKHLKIGF------DFVVTVVLTIKYKVLQLINIVQEDSASRVFLE 604
Query: 284 ERNSHKEAWIMPRPTDAIDRKTRNDPLYSN 313
R + P T +D N P +SN
Sbjct: 605 VREQ-----LFPEDTKLMDIAVMNSPNFSN 629
>Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical
protein F02D10.5 protein.
Length = 638
Score = 32.3 bits (70), Expect = 0.47
Identities = 46/268 (17%), Positives = 111/268 (41%), Gaps = 20/268 (7%)
Query: 55 QGVLVFIDDSYNLPDLDSPVRMVNPSSEVFIALSPERTYSTPGV------KGFPPEQRQC 108
+G L+ + +S P ++S V+P S++ A+S + KG+
Sbjct: 242 RGFLIMVHESEKYPKINSYGVAVSPDSQLHAAISMKNISLLDKANWGSCSKGWNRNDTDV 301
Query: 109 YF-----KDEVKIANFRQYSFHNCIVYRKLKSIKDACNCAPFFLSKGPKSIKNHNTTLVD 163
+ + + K+ R + + Y +S + C P+ + + + ++ + D
Sbjct: 302 PYTATHCEIDCKLRKVRNLCGCSPLAYSARESGSNDTICTPYQIQQCFRKVRGLDNRWED 361
Query: 164 DLHCLPECEHFDYPLEVALGKLASNMHLNRLPFFNEVDLVNQSVLNVFFNDLVSTRYRRD 223
+ C EC ++ + + L +R ++V+ + S ++++F+ + R +
Sbjct: 362 ECDCPSECNMLEFDVTNSYSDLDGR---SRGLSSSKVE-SDISHVSLYFSHVAYERIEQQ 417
Query: 224 VYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIFVYKNKYVQKINVQ 283
L ++L+ G + L LG + ++ ++ I+L V +G + + ++V + +
Sbjct: 418 KQLQTADLLSNIAGSMGLFLGMSTVTLLEIFIYLFKSV-WGTVN--STRQQQFVDAVAEE 474
Query: 284 ERNSHKEAWIMP--RPTDAIDRKTRNDP 309
E+ + I+ R D D+K P
Sbjct: 475 EKERSESIVIIQNGRNDDMDDQKPSRFP 502
>AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein.
Length = 638
Score = 32.3 bits (70), Expect = 0.47
Identities = 46/268 (17%), Positives = 111/268 (41%), Gaps = 20/268 (7%)
Query: 55 QGVLVFIDDSYNLPDLDSPVRMVNPSSEVFIALSPERTYSTPGV------KGFPPEQRQC 108
+G L+ + +S P ++S V+P S++ A+S + KG+
Sbjct: 242 RGFLIMVHESEKYPKINSYGVAVSPDSQLHAAISMKNISLLDKANWGSCSKGWNRNDTDV 301
Query: 109 YF-----KDEVKIANFRQYSFHNCIVYRKLKSIKDACNCAPFFLSKGPKSIKNHNTTLVD 163
+ + + K+ R + + Y +S + C P+ + + + ++ + D
Sbjct: 302 PYTATHCEIDCKLRKVRNLCGCSPLAYSARESGSNDTICTPYQIQQCFRKVRGLDNRWED 361
Query: 164 DLHCLPECEHFDYPLEVALGKLASNMHLNRLPFFNEVDLVNQSVLNVFFNDLVSTRYRRD 223
+ C EC ++ + + L +R ++V+ + S ++++F+ + R +
Sbjct: 362 ECDCPSECNMLEFDVTNSYSDLDGR---SRGLSSSKVE-SDISHVSLYFSHVAYERIEQQ 417
Query: 224 VYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIFVYKNKYVQKINVQ 283
L ++L+ G + L LG + ++ ++ I+L V +G + + ++V + +
Sbjct: 418 KQLQTADLLSNIAGSMGLFLGMSTVTLLEIFIYLFKSV-WGTVN--STRQQQFVDAVAEE 474
Query: 284 ERNSHKEAWIMP--RPTDAIDRKTRNDP 309
E+ + I+ R D D+K P
Sbjct: 475 EKERSESIVIIQNGRNDDMDDQKPSRFP 502
>Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical
protein C27C12.5 protein.
Length = 480
Score = 31.9 bits (69), Expect = 0.62
Identities = 36/198 (18%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 115 KIANFRQYSFHNCIVYRKLKSIKDACNCAPFFLSKGPKSIKNHNTTLVDDLHCLPECEHF 174
K+ Y+ C+ + +C+C+PFF + + H + +D+L P+ +
Sbjct: 247 KVQTGEIYNHLGCLEQCLVAGYDQSCHCSPFF----NRFTRFHCS--IDELLNCPKLK-- 298
Query: 175 DYPLEVALGKLASNMHLNRLPFFNEVDLVNQSVLNVFFNDLVS-TRYRRDVYLNWQNILA 233
+ P + + + N L + ++ ++ N L S +Y+R ++ +++
Sbjct: 299 EVPCDCPMQCYSQNYVLQPVSLLKSRSNISTVTFHLNSNLLRSHQQYKRFKQID---LMS 355
Query: 234 AFGGLLSLMLGFTLISGFDLVIFLVLHVFYGLIQIIF-VYKNKYVQKINVQERNSHKEAW 292
GG++ L LG + ++ ++ I+L +F L + + + + SH+E
Sbjct: 356 YIGGVMGLFLGMSCVTLLEVFIYLFKTIFGTLNSTRHKAFIERLLSNEDGSIHGSHEEII 415
Query: 293 IMPRPTDAIDRKTRNDPL 310
I + + ++T PL
Sbjct: 416 ITQKIEKTVQKETLEQPL 433
>X58982-1|CAA41731.1| 498|Caenorhabditis elegans degenerin protein.
Length = 498
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 204 NQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFY 263
N +++ VF+ L + N+LA FGG L L G + ++ + V FL L Y
Sbjct: 414 NGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTCCEFV-FLFLETAY 472
Query: 264 GLIQIIF-VYKNKYVQK 279
+ + +YK K +K
Sbjct: 473 MSAEHNYSLYKKKKAEK 489
>U58726-8|AAB00580.3| 768|Caenorhabditis elegans Mechanosensory
abnormality protein4 protein.
Length = 768
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 204 NQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFY 263
N +++ VF+ L + N+LA FGG L L G + ++ + V FL L Y
Sbjct: 684 NGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTCCEFV-FLFLETAY 742
Query: 264 GLIQIIF-VYKNKYVQK 279
+ + +YK K +K
Sbjct: 743 MSAEHNYSLYKKKKAEK 759
>U53669-1|AAC47265.1| 768|Caenorhabditis elegans MEC-4 protein.
Length = 768
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 204 NQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFY 263
N +++ VF+ L + N+LA FGG L L G + ++ + V FL L Y
Sbjct: 684 NGAMVEVFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGISFLTCCEFV-FLFLETAY 742
Query: 264 GLIQIIF-VYKNKYVQK 279
+ + +YK K +K
Sbjct: 743 MSAEHNYSLYKKKKAEK 759
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 206 SVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
+++ +++ + R +W N++A GG L LG +++S + + F V
Sbjct: 576 AMIEIYYEQMSYEILRESESYSWFNLMADMGGQAGLFLGASIMSVIEFLFFAV 628
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 161 LVDDLHCLPECEHFDYPLEVALGKLASNMH--LNRLP---FFNEVDLVNQSVLNVFFNDL 215
++ D +C C+ +Y + + + S + LP E N +++ +F+ +L
Sbjct: 615 IIPDCYCHQPCQETNYEVTYSSARWPSGSAKVMECLPGDFLCLEKYRKNAAMVQIFYEEL 674
Query: 216 VSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
+ ++LA GGL L +G +++S ++V +V
Sbjct: 675 NYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIVTLIV 717
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 161 LVDDLHCLPECEHFDYPLEVALGKLASNMH--LNRLP---FFNEVDLVNQSVLNVFFNDL 215
++ D +C C+ +Y + + + S + LP E N +++ +F+ +L
Sbjct: 577 IIPDCYCHQPCQETNYEVTYSSARWPSGSAKVMECLPGDFLCLEKYRKNAAMVQIFYEEL 636
Query: 216 VSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
+ ++LA GGL L +G +++S ++V +V
Sbjct: 637 NYETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEIVTLIV 679
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 206 SVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFLV 258
+++ +++ + R +W N++A GG L LG +++S + + F V
Sbjct: 576 AMIEIYYEQMSYEILRESESYSWFNLMADMGGQAGLFLGASIMSVIEFLFFAV 628
>AF016686-9|AAB66242.1| 300|Caenorhabditis elegans Hypothetical
protein R07C3.13 protein.
Length = 300
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 104 EQRQCYFKDEVKIANFRQYSFHNCIVYRKLKSIKDACNCAP---FFLSKGPKSIKNHNTT 160
EQ F+D +K F+ + N + L++ D +C F+L+ K H +
Sbjct: 155 EQHVKDFRDNIKSV-FKLTNVQNLTIDESLRAKSDKMSCEDRGNFYLTNS----KKHASE 209
Query: 161 LVDDLHCLPECEHFDYPLEVALG 183
L L CL C H+ P++ LG
Sbjct: 210 LQKFLLCLFNCFHWINPVQTQLG 232
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 NTTLVDDLHCLPECEH-FDYPLEVALGKLASNMHLNRLPFFNEVD 201
N +LVDD +C PECE+ P++V + + S + ++ + D
Sbjct: 5066 NYSLVDDRYCEPECENCTSTPIQVHMLAIPSGLPISHIATLTAYD 5110
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 NTTLVDDLHCLPECEH-FDYPLEVALGKLASNMHLNRLPFFNEVD 201
N +LVDD +C PECE+ P++V + + S + ++ + D
Sbjct: 5043 NYSLVDDRYCEPECENCTSTPIQVHMLAIPSGLPISHIATLTAYD 5087
>Z47070-6|CAM84806.1| 212|Caenorhabditis elegans Hypothetical
protein F15G9.4c protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 NTTLVDDLHCLPECEH-FDYPLEVALGKLASNMHLNRLPFFNEVD 201
N +LVDD +C PECE+ P++V + + S + ++ + D
Sbjct: 80 NYSLVDDRYCEPECENCTSTPIQVHMLAIPSGLPISHIATLTAYD 124
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 NTTLVDDLHCLPECEH-FDYPLEVALGKLASNMHLNRLPFFNEVD 201
N +LVDD +C PECE+ P++V + + S + ++ + D
Sbjct: 5066 NYSLVDDRYCEPECENCTSTPIQVHMLAIPSGLPISHIATLTAYD 5110
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 NTTLVDDLHCLPECEH-FDYPLEVALGKLASNMHLNRLPFFNEVD 201
N +LVDD +C PECE+ P++V + + S + ++ + D
Sbjct: 5043 NYSLVDDRYCEPECENCTSTPIQVHMLAIPSGLPISHIATLTAYD 5087
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 178 LEVALGKLASNM---HLNRLPFFNEVDLVNQSVLNVFFNDLVSTRYRRDVYLNWQNILAA 234
L+ A GKL +L F N+ N +++N+F + + + +D + ++
Sbjct: 681 LQAAYGKLFKEELPDYLENFQFGNKFVGDNFAMVNIFLHRMNLEVWSQDRTYGFWSLACD 740
Query: 235 FGGLLSLMLGFTLISGFDLVIFLVLHVFYG 264
GG L L LG +L++ ++V + + G
Sbjct: 741 IGGALGLFLGASLLTIIEIVYLCIQYGLCG 770
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 158 NTTLVDDLHCLPECEH-FDYPLEVALGKLASNMHLNRLPFFNEVD 201
N +LVDD +C PECE+ P++V + + S + ++ + D
Sbjct: 5066 NYSLVDDRYCEPECENCTSTPIQVHMLAIPSGLPISHIATLTAYD 5110
>Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical
protein T28B8.5 protein.
Length = 527
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 230 NILAAFGGLLSLMLGFTLISGFDLVIFLVLHVFY 263
N ++ GG + L LG ++IS + ++ + L FY
Sbjct: 434 NFISDVGGQVGLFLGMSIISAIEYLVLIFLVFFY 467
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 199 EVDLVNQSVLNVFFNDLVSTRYRRDVYLNWQNILAAFGGLLSLMLGFTLISGFDLVIFL 257
+ D+VN + +F ++ N +LA GG + L +G TL++ + ++FL
Sbjct: 809 QYDVVNLLHIKFYFAHFKQETILQERSYNLFLLLAEIGGTIGLYVGATLLTAAETLVFL 867
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 253 LVIFLVLHVFYGLIQIIFVYKNKYVQKINVQERNSHK 289
L +F+ LH + + Q IF++KNK + + N HK
Sbjct: 189 LFVFVFLHAQHVMGQNIFIFKNKILNYLIYSILNLHK 225
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.140 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,524,606
Number of Sequences: 27539
Number of extensions: 378341
Number of successful extensions: 1172
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1136
Number of HSP's gapped (non-prelim): 56
length of query: 317
length of database: 12,573,161
effective HSP length: 81
effective length of query: 236
effective length of database: 10,342,502
effective search space: 2440830472
effective search space used: 2440830472
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 60 (28.3 bits)
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