GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000673-TA|BGIBMGA000673-PA|IPR002502|N-acetylmuramoyl-L-
alanine amidase, family 2, IPR006619|Animal peptidoglycan recognition
protein PGRP
         (146 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   1.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   1.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   7.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 113 STLSPGDKLFEIIVEWPHFASDFTNLTDLIPNY 145
           S L+ G    ++ ++WP F  D++ +  ++ +Y
Sbjct: 111 SGLASGYLYLKLAMKWPRFMKDWSCVEVMMASY 143


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 113 STLSPGDKLFEIIVEWPHFASDFTNLTDLIPNY 145
           S L+ G    ++ ++WP F  D++ +  ++ +Y
Sbjct: 111 SGLASGYLYLKLAMKWPRFMKDWSCVEVMMASY 143


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 113 STLSPGDKLFEIIVEWPHFASDFTNLTDLIPNY 145
           S L+ G    ++ ++WP F  D++ +  ++ +Y
Sbjct: 111 SGLASGYLYLKLAMKWPRFMKDWSCVEVMMASY 143


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 90   IKRGVDLGKIAKDYKLFGHRQLSSTLSPGDKLFEIIVEWPHFASDFTNLTDLIPNY 145
            I++G D GKI     L+G  Q  S     D+        P  A +FT     +  Y
Sbjct: 2550 IEKGADPGKIVMGMPLYG--QSFSLADAADRGLNAKSYGPGEAGEFTRAGGFLAYY 2603


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 81  EQLEACRKLIKRGVDLGKIAKDYKLFGHRQLSSTLSPGDKLF 122
           E++EA +   K   +L K+A+ Y++ G      T+   +KLF
Sbjct: 597 EKVEAIKTSPKMRHELQKLAQVYRILG-----ETIETWNKLF 633


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 20  QTFHIESRKWHDIGYNFLVGGDGSAYCG 47
           ++F + S   + +G   + GGD   Y G
Sbjct: 269 RSFTLASASNNKLGAPIVAGGDAGRYTG 296


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.144    0.463 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,098
Number of Sequences: 317
Number of extensions: 1670
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 146
length of database: 114,650
effective HSP length: 51
effective length of query: 95
effective length of database: 98,483
effective search space:  9355885
effective search space used:  9355885
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)