GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000673-TA|BGIBMGA000673-PA|IPR002502|N-acetylmuramoyl-L-
alanine amidase, family 2, IPR006619|Animal peptidoglycan recognition
protein PGRP
         (146 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    27   0.19 
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    24   1.8  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   5.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   7.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   9.4  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   9.4  

>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 0.19
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 95  DLGKIAKDYKLFGHRQLSSTLSPGD--KLFEIIVEWP 129
           D G I +   +FG R +  T SP D  K+F    +WP
Sbjct: 83  DYGDIVRFKGMFGRRDIIMTYSPSDIEKVFRNEGQWP 119


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 30  HDIGYNFLVGGDGSAYCGRGWDSVGAHTLGYNNFAIGISFIGT 72
           H I     + G G+   G      G +T G N  AIG++ +G+
Sbjct: 342 HAINRGIGIEGLGTMLAGLWGSGNGTNTFGENVGAIGVTKVGS 384


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)

Query: 113 STLSPGDKLFEIIVE 127
           +TLS G K+FE++V+
Sbjct: 6   TTLSAGAKVFEVVVQ 20


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 32  IGYNFLVGGDGSAYCGRGWDSVGAHTL 58
           IG + L GG GS     G   +G H++
Sbjct: 671 IGSSSLGGGGGSGRSSSGGGMIGMHSV 697


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 5/24 (20%), Positives = 17/24 (70%)

Query: 9   QSQCVLRVRLIQTFHIESRKWHDI 32
           Q+ C+ ++  ++++ +ES+  H++
Sbjct: 891 QALCISQIHQLRSYFVESQNRHEL 914


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 90  IKRGVDLGKIAKDYKLFGHR 109
           I+R VD G+ AK ++   HR
Sbjct: 554 IQRVVDAGRRAKSFRRTNHR 573


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.144    0.463 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,306
Number of Sequences: 2123
Number of extensions: 6615
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 146
length of database: 516,269
effective HSP length: 58
effective length of query: 88
effective length of database: 393,135
effective search space: 34595880
effective search space used: 34595880
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)