Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000672-TA|BGIBMGA000672-PA|IPR002020|Citrate synthase,
IPR010109|Citrate synthase, eukaryotic
(465 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44350.2 68415.m05517 citrate synthase, mitochondrial, putati... 619 e-177
At2g44350.1 68415.m05516 citrate synthase, mitochondrial, putati... 618 e-177
At3g60100.1 68416.m06711 citrate synthase, mitochondrial, putati... 613 e-175
At3g58750.1 68416.m06548 citrate synthase, glyoxysomal, putative... 115 8e-26
At2g42790.1 68415.m05298 citrate synthase, glyoxysomal, putative... 114 1e-25
At3g58740.1 68416.m06547 citrate synthase, glyoxysomal, putative... 94 2e-19
At2g11270.1 68415.m01208 citrate synthase-related contains simil... 44 2e-04
At5g49460.1 68418.m06119 ATP-citrate synthase, putative / ATP-ci... 32 0.70
At5g03680.1 68418.m00327 trihelix DNA-binding protein, putative ... 31 2.1
At3g06650.1 68416.m00774 ATP-citrate synthase, putative / ATP-ci... 31 2.1
At2g40210.1 68415.m04945 MADS-box family protein contains Pfam p... 30 3.7
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 5.0
At5g53030.2 68418.m06586 expressed protein 29 6.5
At5g53030.1 68418.m06587 expressed protein 29 6.5
>At2g44350.2 68415.m05517 citrate synthase, mitochondrial, putative
strong similarity to SP|P20115 Citrate synthase,
mitochondrial precursor {Arabidopsis thaliana};
contains Pfam profile PF00285: Citrate synthase
Length = 474
Score = 619 bits (1529), Expect = e-177
Identities = 276/459 (60%), Positives = 367/459 (79%), Gaps = 1/459 (0%)
Query: 1 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 60
++ F SR+ Q + + ++ S+ +LKS LQE IP++Q+++++ + +HG
Sbjct: 7 VSAFTRLRSRVQGQQSSLSNSVRWIQMQSSTDLDLKSQLQELIPEQQDRLKKLKSEHGKV 66
Query: 61 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 120
++G +TVDM+ GGMRG+ GL+WETS+LD +EGIRFRGLSIPECQ+ LP A+ G EPLPEG
Sbjct: 67 QLGNITVDMVIGGMRGMTGLLWETSLLDPEEGIRFRGLSIPECQKVLPTAQSGAEPLPEG 126
Query: 121 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 180
L WLL+TG +P++ Q +ALSK+ A RA +P +V ++ +P HPM+QF++ V AL +
Sbjct: 127 LLWLLLTGKVPSKEQVEALSKDLANRAAVPDYVYNAIDALPSTAHPMTQFASGVMALQVQ 186
Query: 181 SKFAKAYSEGVHKSKYWEYVYEDTMNLIAKLPVIAATIYRNVYRDGKGIGAIDDNKDWSA 240
S+F KAY G+HKSK+WE YED +NLIA++PV+AA +YR +Y++G I + D + D+ A
Sbjct: 187 SEFQKAYENGIHKSKFWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPS-DKSLDYGA 245
Query: 241 NYCNMLGFDDPQFTELMRLYLTIHSDHEGGNVSAHTTHLVGSALSDPYLSFAAGLNGLAG 300
N+ +MLGFDD + ELMRLY+TIHSDHEGGNVSAHT HLVGSALSDPYLSFAA LNGLAG
Sbjct: 246 NFSHMLGFDDEKVKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAG 305
Query: 301 PLHGLANQEVLVWLEKLRKQVGDNFTEEQLKEFIWKTLKSGQVVPGYGHAVLRKTDPRYT 360
PLHGLANQEVL+W++ + ++ G++ ++EQLKE++WKTL SG+V+PGYGH VLR TDPRY
Sbjct: 306 PLHGLANQEVLLWIKSVVEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYV 365
Query: 361 CQREFALKHLPNDPLFKLVAAVYKVVPPILTELGKVKNPWPNVDSHSGVLLQYYGLKEMN 420
CQREFALKHLP+DPLF+LV+ +Y+VVPP+LTELGKVKNPWPNVD+HSGVLL +YGL E
Sbjct: 366 CQREFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEAR 425
Query: 421 YYTVMFGVSRALGVLAQLIWSRALGLPIERPKSLSTEML 459
YYTV+FGVSR+LG+ +QLIW RALGL +ERPKS++ + L
Sbjct: 426 YYTVLFGVSRSLGICSQLIWDRALGLALERPKSVTMDWL 464
>At2g44350.1 68415.m05516 citrate synthase, mitochondrial, putative
strong similarity to SP|P20115 Citrate synthase,
mitochondrial precursor {Arabidopsis thaliana};
contains Pfam profile PF00285: Citrate synthase
Length = 473
Score = 618 bits (1526), Expect = e-177
Identities = 272/431 (63%), Positives = 356/431 (82%), Gaps = 1/431 (0%)
Query: 29 SAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLD 88
S+ +LKS LQE IP++Q+++++ + +HG ++G +TVDM+ GGMRG+ GL+WETS+LD
Sbjct: 34 SSTDLDLKSQLQELIPEQQDRLKKLKSEHGKVQLGNITVDMVIGGMRGMTGLLWETSLLD 93
Query: 89 ADEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAE 148
+EGIRFRGLSIPECQ+ LP A+ G EPLPEGL WLL+TG +P++ Q +ALSK+ A RA
Sbjct: 94 PEEGIRFRGLSIPECQKVLPTAQSGAEPLPEGLLWLLLTGKVPSKEQVEALSKDLANRAA 153
Query: 149 LPAHVVTMLNNMPGKLHPMSQFSAAVTALNSESKFAKAYSEGVHKSKYWEYVYEDTMNLI 208
+P +V ++ +P HPM+QF++ V AL +S+F KAY G+HKSK+WE YED +NLI
Sbjct: 154 VPDYVYNAIDALPSTAHPMTQFASGVMALQVQSEFQKAYENGIHKSKFWEPTYEDCLNLI 213
Query: 209 AKLPVIAATIYRNVYRDGKGIGAIDDNKDWSANYCNMLGFDDPQFTELMRLYLTIHSDHE 268
A++PV+AA +YR +Y++G I + D + D+ AN+ +MLGFDD + ELMRLY+TIHSDHE
Sbjct: 214 ARVPVVAAYVYRRMYKNGDSIPS-DKSLDYGANFSHMLGFDDEKVKELMRLYITIHSDHE 272
Query: 269 GGNVSAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVWLEKLRKQVGDNFTEE 328
GGNVSAHT HLVGSALSDPYLSFAA LNGLAGPLHGLANQEVL+W++ + ++ G++ ++E
Sbjct: 273 GGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVEECGEDISKE 332
Query: 329 QLKEFIWKTLKSGQVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPLFKLVAAVYKVVPP 388
QLKE++WKTL SG+V+PGYGH VLR TDPRY CQREFALKHLP+DPLF+LV+ +Y+VVPP
Sbjct: 333 QLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQREFALKHLPDDPLFQLVSKLYEVVPP 392
Query: 389 ILTELGKVKNPWPNVDSHSGVLLQYYGLKEMNYYTVMFGVSRALGVLAQLIWSRALGLPI 448
+LTELGKVKNPWPNVD+HSGVLL +YGL E YYTV+FGVSR+LG+ +QLIW RALGL +
Sbjct: 393 VLTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRSLGICSQLIWDRALGLAL 452
Query: 449 ERPKSLSTEML 459
ERPKS++ + L
Sbjct: 453 ERPKSVTMDWL 463
>At3g60100.1 68416.m06711 citrate synthase, mitochondrial, putative
strong similarity to SP|Q43175 Citrate synthase,
mitochondrial precursor {Solanum tuberosum}; contains
Pfam profile PF00285: Citrate synthase
Length = 433
Score = 613 bits (1513), Expect = e-175
Identities = 277/427 (64%), Positives = 353/427 (82%), Gaps = 7/427 (1%)
Query: 34 NLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGI 93
+LKS +QE IP++Q+++++ + + G VG +TVDM+ GGMRG+ GL+WETS+LDADEGI
Sbjct: 5 DLKSQMQEIIPEQQDRLKKLKSEQGKVPVGNITVDMVLGGMRGMTGLLWETSLLDADEGI 64
Query: 94 RFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAELPAHV 153
RFRG+SIPECQ+ LP A+ GEEPLPE L WLL+TG +PT+ QA ALS E A RA +PA
Sbjct: 65 RFRGMSIPECQKILPSAESGEEPLPESLLWLLLTGKVPTKEQANALSTELAHRAAVPA-- 122
Query: 154 VTMLNNMPGKLHPMSQFSAAVTALNSESKFAKAYSEG-VHKSKYWEYVYEDTMNLIAKLP 212
++ +P HPM+QF++ V AL +S+F KAY +G + KSKYWE +ED +NLIA++P
Sbjct: 123 ---IDALPSTAHPMTQFASGVMALQVQSEFQKAYEQGDISKSKYWEPTFEDALNLIARVP 179
Query: 213 VIAATIYRNVYRDGKGIGAIDDNKDWSANYCNMLGFDDPQFTELMRLYLTIHSDHEGGNV 272
V+A+ +YR +Y+DG I +DD+ D+ AN+ +MLGFD PQ ELMRLY+TIHSDHEGGNV
Sbjct: 180 VVASYVYRRMYKDGSII-PLDDSLDYGANFSHMLGFDSPQMKELMRLYVTIHSDHEGGNV 238
Query: 273 SAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVWLEKLRKQVGDNFTEEQLKE 332
SAH HLVGSALSDPYLSFAA LNGLAGPLHGLANQEVL+W++ + ++ G++ ++EQLK+
Sbjct: 239 SAHAGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKLVVEECGESISKEQLKD 298
Query: 333 FIWKTLKSGQVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPLFKLVAAVYKVVPPILTE 392
++WKTL SG+VVPGYGH VLRKTDPRY CQREFALKHLP+DPLF+LV+ +Y+VVPPILTE
Sbjct: 299 YVWKTLNSGKVVPGYGHGVLRKTDPRYICQREFALKHLPDDPLFQLVSKLYEVVPPILTE 358
Query: 393 LGKVKNPWPNVDSHSGVLLQYYGLKEMNYYTVMFGVSRALGVLAQLIWSRALGLPIERPK 452
LGKVKNPWPNVD+HSGVLL YYGL E YYTV+FGVSR+LG+ +QLIW RALGLP+ERPK
Sbjct: 359 LGKVKNPWPNVDAHSGVLLNYYGLTEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPK 418
Query: 453 SLSTEML 459
S++ + L
Sbjct: 419 SVNMDWL 425
>At3g58750.1 68416.m06548 citrate synthase, glyoxysomal, putative
strong similarity to SP|P49299 Citrate synthase,
glyoxysomal precursor {Cucurbita maxima}; contains Pfam
profile PF00285: Citrate synthase
Length = 514
Score = 115 bits (276), Expect = 8e-26
Identities = 105/391 (26%), Positives = 182/391 (46%), Gaps = 42/391 (10%)
Query: 87 LDADEGI-RFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEWAA 145
+D DEGI R+RG I E + + + +LL+ G++P+++Q +
Sbjct: 112 IDGDEGILRYRGYPIEELAESSTFIE---------VAYLLMYGNLPSQSQLADWEFTVSQ 162
Query: 146 RAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSESKFAKAYSEG--VHKSKYWEYVYED 203
+ +P V+ ++ +MP HPM +A++AL+ A G ++KSK + +
Sbjct: 163 HSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALSGQDIYKSK--QVRDKQ 220
Query: 204 TMNLIAKLPVIAATIYRNVYRDGKGIGAIDDNKDWSANYCNMLGF-------DDPQFTEL 256
+ ++ K P IAA Y + G+ N +S N+ ML +P+ +
Sbjct: 221 IVRILGKAPTIAAAAY--LRTAGRPPVLPSANLSYSENFLYMLDSMGNRSYKPNPRLARV 278
Query: 257 MRLYLTIHSDHEGGNVSAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVWLEK 316
+ + +H++HE +A HL S + D Y + A + L GPLHG AN+ VL K
Sbjct: 279 LDILFILHAEHEMNCSTAAARHLASSGV-DVYTACAGAVGALYGPLHGGANEAVL----K 333
Query: 317 LRKQVGDNFTEEQLKEFIWKTLKSGQVVPGYGHAVLRKTDPRYTCQREFA---LKHLPND 373
+ ++G T E + +FI + + G+GH V + DPR ++ A + D
Sbjct: 334 MLAEIG---TAENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLADEVFSIVGRD 390
Query: 374 PLFKLVAAVYKVVPPILTELGKVKNPWPNVDSHSGVLLQYYGLKEMNYYTVMFGVSRALG 433
PL ++ A+ K + E + +PNVD +SG++ + G ++TV+F V R G
Sbjct: 391 PLIEVAVALEKAA--LSDEYFVKRKLYPNVDFYSGLIYRAMGFPP-EFFTVLFAVPRMAG 447
Query: 434 VLAQLIWSRALGLP---IERPKSLSTEMLMK 461
L+ W +L P I RP+ T + M+
Sbjct: 448 YLSH--WRESLDDPDTRIMRPQQAYTGVWMR 476
>At2g42790.1 68415.m05298 citrate synthase, glyoxysomal, putative
strong similarity to SP|P49299 Citrate synthase,
glyoxysomal precursor {Cucurbita maxima}; contains Pfam
profile PF00285: Citrate synthase
Length = 509
Score = 114 bits (275), Expect = 1e-25
Identities = 104/393 (26%), Positives = 182/393 (46%), Gaps = 42/393 (10%)
Query: 85 SVLDADEGI-RFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 143
S +D DEGI R+RG I E + + + +LL+ G++P+E+Q
Sbjct: 105 SYIDGDEGILRYRGYPIEEMAENSTFLE---------VAYLLMYGNLPSESQLSDWEFAV 155
Query: 144 AARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSESKFAKAYSEG--VHKSKYWEYVY 201
+ + +P V+ ++ +MP HPM +A++AL+ A G ++ SK +
Sbjct: 156 SQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDIYDSK--QVRD 213
Query: 202 EDTMNLIAKLPVIAATIYRNVYRDGKGIGAIDDNKDWSANYCNMLGF-------DDPQFT 254
+ + +I K P IAA Y + G+ N ++ N+ ML +P+
Sbjct: 214 KQIIRIIGKAPTIAAAAYLRM--AGRPPVLPSGNLPYADNFLYMLDSLGNRSYKPNPRLA 271
Query: 255 ELMRLYLTIHSDHEGGNVSAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVWL 314
++ + +H++HE +A HL S + D Y + A + L GPLHG AN+ VL
Sbjct: 272 RVLDILFILHAEHEMNCSTAAARHLASSGV-DVYTAVAGAVGALYGPLHGGANEAVL--- 327
Query: 315 EKLRKQVGDNFTEEQLKEFIWKTLKSGQVVPGYGHAVLRKTDPRYTCQREFA---LKHLP 371
K+ ++G T E + EFI + + G+GH V + DPR + A +
Sbjct: 328 -KMLSEIG---TVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKNLADEVFSIVG 383
Query: 372 NDPLFKLVAAVYKVVPPILTELGKVKNPWPNVDSHSGVLLQYYGLKEMNYYTVMFGVSRA 431
DPL ++ A+ K + + + +PNVD +SG++ + G ++TV+F + R
Sbjct: 384 KDPLIEVAVALEKAA--LSDDYFVKRKLYPNVDFYSGLIYRAMGFPP-EFFTVLFAIPRM 440
Query: 432 LGVLAQLIWSRALGLP---IERPKSLSTEMLMK 461
G L+ W +L P I RP+ + T + ++
Sbjct: 441 AGYLSH--WKESLDDPDTKIMRPQQVYTGVWLR 471
>At3g58740.1 68416.m06547 citrate synthase, glyoxysomal, putative
strong similarity to SP|P49299 Citrate synthase,
glyoxysomal precursor {Cucurbita maxima}; contains Pfam
profile PF00285: Citrate synthase
Length = 480
Score = 93.9 bits (223), Expect = 2e-19
Identities = 98/388 (25%), Positives = 177/388 (45%), Gaps = 46/388 (11%)
Query: 85 SVLDADEGI-RFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 143
S +D DEGI R+RG + E ++ + + +LL+ G++P++ Q
Sbjct: 107 SYIDGDEGILRYRGYPVEELAEKSTYTE---------VTYLLIYGNLPSQRQLADWEFAI 157
Query: 144 AARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSESKFA--KAYSEGVHKSKYWEYVY 201
+ + +P V+ M+ +MP +HP+ A++AL+ A GV+KSK +
Sbjct: 158 SQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSK--QVRD 215
Query: 202 EDTMNLIAKLPVIAATIYRNVYRDGKGIGAIDDNKDWSANYCNMLGF-------DDPQFT 254
+ + ++ + P IAA Y + + GK N +S N+ M+ +P+
Sbjct: 216 KQIVRVLGQAPTIAAAAY--LRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLA 273
Query: 255 ELMRLYLTIHSDHEGGNVSAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVWL 314
++ + + ++HE +A HL S D Y + + G+ + GPLHG A + +
Sbjct: 274 RVLDILFILQAEHEMNCSTAAARHLSSSG-GDVYTAVSGGVGAIYGPLHGGAVEATI--- 329
Query: 315 EKLRKQVGDNFTEEQLKEFIWKTLKSGQVVPGYGHAVLRKTDPRYTCQREFA---LKHLP 371
+ ++G T E + EFI + + G+GH + + DPR ++ A L
Sbjct: 330 -NMLSEIG---TVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILG 385
Query: 372 NDPLFKLVAAVYKVVPPILTELGKVKNPWPNVDSHSGVLLQYYGLKEMNYYTVMFGVSRA 431
DPL ++ A+ K + E + +PNVD +SG++ + G+ + +T VSR
Sbjct: 386 RDPLVEVGDALEKAA--LSDEYFVKRKLYPNVDFYSGLINRAMGIP--SSFT---AVSRI 438
Query: 432 LGVLAQLIWSRALGLP---IERPKSLST 456
G L+ W +L P I RP+ + T
Sbjct: 439 AGYLSH--WRESLDDPDTKIMRPQQVYT 464
>At2g11270.1 68415.m01208 citrate synthase-related contains
similarity to Swiss-Prot:P20115 citrate synthase,
mitochondrial precursor [Arabidopsis thaliana]
Length = 83
Score = 44.0 bits (99), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 47 QEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGL 80
Q++ ++ + KHG VG +TVDM+ GGMRG+ GL
Sbjct: 43 QDRSKKLKLKHGKVPVGNITVDMVLGGMRGMTGL 76
>At5g49460.1 68418.m06119 ATP-citrate synthase, putative /
ATP-citrate (pro-S-)-lyase, putative / citrate cleavage
enzyme, putative strong similarity to ATP:citrate lyase
[Capsicum annuum] GI:13160653; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 608
Score = 32.3 bits (70), Expect = 0.70
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 254 TELMRLYLTIHSDHEGGNVSAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVW 313
T+ + + + + +DH AH T + A D S +GL + GP G A + +
Sbjct: 400 TKFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARY 458
Query: 314 LEKLRKQVGDNFTEEQLKEFIWKTLKSGQVVPGYGHAVLRK--TDPRYTCQREFALKHLP 371
+ + N T EF+ K G VPG GH + + D R ++FA + P
Sbjct: 459 FKDACDR---NLTPY---EFVEGMKKKGIRVPGIGHRIKSRDNRDKRVELLQKFARSNFP 512
Query: 372 NDPLFKLVAAV-----YKVVPPILTELGKVKNPWPNVDSHSGVLL--QYYGLKEMNYYTV 424
+ + V K +L G + + + ++ + SG+ + + ++ Y
Sbjct: 513 SVKYMEYAVTVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNG 572
Query: 425 MFGVSRALGVLAQLIWSRALGLPIER 450
+F ++R++G++ + L P+ R
Sbjct: 573 LFVLARSIGLIGHTFDQKRLKQPLYR 598
>At5g03680.1 68418.m00327 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 591
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 312 VWLEKLRKQVGDNFTEEQLKEFIWKTLKSGQV 343
VWLEKL K + D + +KE W+ +++ ++
Sbjct: 311 VWLEKLTKVIEDKEEQRMMKEEEWRKIEAARI 342
>At3g06650.1 68416.m00774 ATP-citrate synthase, putative /
ATP-citrate (pro-S-)-lyase, putative / citrate cleavage
enzyme, putative strong similarity to ATP:citrate lyase
[Capsicum annuum] GI:13160653; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 608
Score = 30.7 bits (66), Expect = 2.1
Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 254 TELMRLYLTIHSDHEGGNVSAHTTHLVGSALSDPYLSFAAGLNGLAGPLHGLANQEVLVW 313
T+ + + + + +DH AH T + A D S +GL + GP G A + +
Sbjct: 400 TKFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARY 458
Query: 314 LEKLRKQVGDNFTEEQLKEFIWKTLKSGQVVPGYGHAVLRK--TDPRYTCQREFALKHLP 371
+ + N T EF+ K G VPG GH + + D R ++FA + P
Sbjct: 459 FKDACDR---NLTPY---EFVEGMKKKGIRVPGIGHRIKSRDNRDKRVELLQKFARSNFP 512
Query: 372 NDPLFKLVAAV-----YKVVPPILTELGKVKNPWPNVDSHSGVLL--QYYGLKEMNYYTV 424
+ V K +L G + + + ++ + SG+ + + ++ Y
Sbjct: 513 AVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNG 572
Query: 425 MFGVSRALGVLAQLIWSRALGLPIER 450
+F ++R++G++ + L P+ R
Sbjct: 573 LFVLARSIGLIGHTFDQKRLKQPLYR 598
>At2g40210.1 68415.m04945 MADS-box family protein contains Pfam
profile: PF00319 SRF-type transcription factor
(DNA-binding and dimerisation domain)
Length = 371
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/42 (28%), Positives = 28/42 (66%)
Query: 31 EQTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYG 72
+++N++S L+EK K QE++++ +KK+ + E+ + + G
Sbjct: 82 KESNVESYLKEKTHKFQEQLKKSKKKNKEHVIDELMMQLQSG 123
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 29.5 bits (63), Expect = 5.0
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 FRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGSTKVG 63
F+++ + L E + + A + ++ L +EQ +L+ +LQEK E++ E R K G
Sbjct: 450 FQVSQNLLQEKESSLVEAKLEIQHLKSEQASLELLLQEK----DEELAEARNKLGEVN-Q 504
Query: 64 EVT 66
EVT
Sbjct: 505 EVT 507
>At5g53030.2 68418.m06586 expressed protein
Length = 224
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 84 TSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPE 119
T+VLD +R R LS+P + K +G P PE
Sbjct: 98 TTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPE 133
>At5g53030.1 68418.m06587 expressed protein
Length = 245
Score = 29.1 bits (62), Expect = 6.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 84 TSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPE 119
T+VLD +R R LS+P + K +G P PE
Sbjct: 98 TTVLDGPYDLRRRSLSLPRSAAVIRKLRGVPAPAPE 133
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,220,521
Number of Sequences: 28952
Number of extensions: 494901
Number of successful extensions: 1143
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1116
Number of HSP's gapped (non-prelim): 14
length of query: 465
length of database: 12,070,560
effective HSP length: 84
effective length of query: 381
effective length of database: 9,638,592
effective search space: 3672303552
effective search space used: 3672303552
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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