GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000671-TA|BGIBMGA000671-PA|undefined
         (283 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.64 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.64 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.84 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.9  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)

Query: 220 TSKLLPPDERGVAYAFLSV 238
           TSKL+PPDER + Y++  +
Sbjct: 47  TSKLVPPDER-ITYSWTEI 64


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)

Query: 220 TSKLLPPDERGVAYAFLSV 238
           TSKL+PPDER + Y++  +
Sbjct: 47  TSKLVPPDER-ITYSWTEI 64


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 12  TMFFY-MMAYMITNVIEQTFYVFQTCHINHGYST--EICYNISKHADINKEVQVTVSTFH 68
           + F Y  M Y+I + I+  +        N+   T  E  Y +SK   +  E++ TV  F+
Sbjct: 138 SQFLYGFMIYLILDTIKSKYRQMHRLLANYKVITSDEFFYLVSKIESLACELKNTVDDFN 197

Query: 69  QWNGIASHVVPLFLAFFLGSYSD 91
              GI+  ++  +      +Y D
Sbjct: 198 DIFGISFLLIISYSTLHFVNYID 220


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 80  LFLAFFLGSYSDKRGRKIVLLAG----LLGKLYFSIMITVN 116
           ++ A   GS +D+RGR I L       +LG +  S +++ N
Sbjct: 315 IYAAIHQGSVTDERGRSITLTENEGIDILGNMIESSILSPN 355


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/23 (34%), Positives = 13/23 (56%), Gaps = 1/23 (4%)

Query: 60   VQVTVSTFH-QWNGIASHVVPLF 81
            + V    +H QW+ I  HV P++
Sbjct: 2010 IAVMCYDYHGQWDKITGHVAPMY 2032


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 15  FYMMAYMITNVI 26
           FYM AY+I+N I
Sbjct: 253 FYMSAYLISNPI 264


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 235 FLSVMENAVAIFASIVYTQIYNATIGTEYINSIFYFTISTQ 275
           F+S+ ++ V  F++  +  I    I +   N   YF IS Q
Sbjct: 724 FISIAKHNVRTFSAGGFFDIRKNLIFSLIANVAMYFVISVQ 764


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 256 NATIGTEYINSIFYFT 271
           ++TIG +Y NS  Y T
Sbjct: 409 HSTIGNDYYNSPLYHT 424


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.138    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,929
Number of Sequences: 317
Number of extensions: 2613
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 9
length of query: 283
length of database: 114,650
effective HSP length: 56
effective length of query: 227
effective length of database: 96,898
effective search space: 21995846
effective search space used: 21995846
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)