GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000671-TA|BGIBMGA000671-PA|undefined
         (283 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   3.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   3.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   3.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   9.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.9  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   9.9  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 245 IFASIVYTQIYNATIGTEYINSIFYFTISTQV 276
           +F SI Y  I   T  T Y+ ++F  T+   V
Sbjct: 533 VFTSITYPMIGLRTGATHYLTTLFIVTLVANV 564


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 245 IFASIVYTQIYNATIGTEYINSIFYFTISTQV 276
           +F SI Y  I   T  T Y+ ++F  T+   V
Sbjct: 533 VFTSITYPMIGLRTGATHYLTTLFIVTLVANV 564


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 245 IFASIVYTQIYNATIGTEYINSIFYFTISTQV 276
           +F SI Y  I   T  T Y+ ++F  T+   V
Sbjct: 511 VFTSITYPMIGLRTGATHYLTTLFIVTLVANV 542


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 103 LLGKLYFSIMITVNTMNDWPVEYVIYTAALPSALTGADLAIF 144
           LL  LYF  ++        P  ++IY    PS L  + + +F
Sbjct: 11  LLFNLYFLFVVRGTGKPFLPTSFLIYCFVSPSCLECSSVPLF 52


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/40 (25%), Positives = 18/40 (45%)

Query: 28  QTFYVFQTCHINHGYSTEICYNISKHADINKEVQVTVSTF 67
           Q   +F    ++H Y+        +H DI + V+V +  F
Sbjct: 442 QEMAIFSEADVHHQYAIAFKTPPYRHKDITEPVEVLMQLF 481


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 84  FFLGSYSDKRGRKIVLLAGLLGKLYFSIMITVNTMNDWP 122
           +F   Y  + G   V LAG+LG L   +  TV +++ +P
Sbjct: 290 WFRVPYPGQFGLPTVSLAGVLGMLAGVLACTVESISYYP 328


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.138    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,556
Number of Sequences: 2123
Number of extensions: 9466
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 283
length of database: 516,269
effective HSP length: 63
effective length of query: 220
effective length of database: 382,520
effective search space: 84154400
effective search space used: 84154400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 47 (23.0 bits)